mm9_v1_chr9_-_10904725_10904816	13.6471	FOX{I1,J2}.p2	AK138164|Cntn5|244682|contactin 5	AK162856|Cntn5|244682|contactin 5	NM_001033359|Cntn5|244682|contactin 5	NM_001170787|Cntn5|244682|contactin 5
mm9_v1_chr10_-_127935725_127935761	7.31269	FOX{I1,J2}.p2	BC037527|Myl6b|216459|myosin, light polypeptide 6B	NM_172259|Myl6b|216459|myosin, light polypeptide 6B
mm9_v1_chr10_-_88067758_88067896	6.07587	FOX{I1,J2}.p2	BC062158|Mybpc1|109272|myosin binding protein C, slow-type	AK132188|Mybpc1|109272|myosin binding protein C, slow-type	NM_175418|Mybpc1|109272|myosin binding protein C, slow-type
mm9_v1_chr2_+_106533281_106533425	5.27543	FOX{I1,J2}.p2	AK165186|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr5_+_137994744_137994862	5.2705	FOX{I1,J2}.p2	BC049539|Actl6b|83766|actin-like 6B	NM_031404|Actl6b|83766|actin-like 6B	AB075226|Actl6b|83766|actin-like 6B
mm9_v1_chr11_-_41814008_41814185	5.26675	FOX{I1,J2}.p2	M86572|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	BC031762|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	M62374|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	NM_008073|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK034338|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm9_v1_chr7_-_147268395_147268472	4.41	FOX{I1,J2}.p2	AK002979|Caly|68566|calcyon neuron-specific vesicular protein	AK163466|Caly|68566|calcyon neuron-specific vesicular protein	AK003400|Caly|68566|calcyon neuron-specific vesicular protein	NM_001190385|Caly|68566|calcyon neuron-specific vesicular protein	NM_026769|Caly|68566|calcyon neuron-specific vesicular protein
mm9_v1_chr12_-_42212538_42212554	4.25341	FOX{I1,J2}.p2	AK036316|Lrrn3|16981|leucine rich repeat protein 3, neuronal	D49802|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chr10_+_68996455_68996596	4.25019	FOX{I1,J2}.p2	NM_146005|Ank3|11735|ankyrin 3, epithelial	NM_170688|Ank3|11735|ankyrin 3, epithelial	NM_170689|Ank3|11735|ankyrin 3, epithelial	NM_170690|Ank3|11735|ankyrin 3, epithelial	NM_170728|Ank3|11735|ankyrin 3, epithelial	NM_170729|Ank3|11735|ankyrin 3, epithelial	NM_170730|Ank3|11735|ankyrin 3, epithelial	AK162547|Ank3|11735|ankyrin 3, epithelial	AK042330|Ank3|11735|ankyrin 3, epithelial	BC021657|Ank3|11735|ankyrin 3, epithelial
mm9_v1_chr2_+_65458814_65458867	4.12033	FOX{I1,J2}.p2	
mm9_v1_chr15_+_102289600_102289666	4.04933	FOX{I1,J2}.p2	NM_001170911|Prr13|66151|proline rich 13	NM_025385|Prr13|66151|proline rich 13	AK003850|Prr13|66151|proline rich 13	AK002430|Prr13|66151|proline rich 13	AK008894|Prr13|66151|proline rich 13	AK154583|Prr13|66151|proline rich 13	BC016234|Prr13|66151|proline rich 13	AK181585|Prr13|66151|proline rich 13
mm9_v1_chr19_-_19185685_19185685	4.03688	FOX{I1,J2}.p2	NM_001043354|Rorb|225998|RAR-related orphan receptor beta
mm9_v1_chr16_-_10447440_10447456	3.78533	FOX{I1,J2}.p2	BC068110|Fam18a|383103|family with sequence similarity 18, member A	NM_001013778|Fam18a|383103|family with sequence similarity 18, member A
mm9_v1_chr11_-_41813792_41813857	3.76411	FOX{I1,J2}.p2	AK047085|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK136889|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	NM_177408|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233775|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233776|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233777|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233778|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233779|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233780|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233781|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233782|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233783|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233784|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233785|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233786|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233787|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233788|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233789|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233790|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233791|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233792|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233793|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233794|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233795|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233796|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233797|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233798|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233799|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233800|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233801|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AF233802|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK141129|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2	AK049857|Gabrg2|14406|gamma-aminobutyric acid (GABA) A receptor, subunit gamma 2
mm9_v1_chr15_+_4325490_4325644	3.54747	FOX{I1,J2}.p2	AK038575|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	NM_177355|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	BC137637|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	BC137639|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3	AK044972|Plcxd3|239318|phosphatidylinositol-specific phospholipase C, X domain containing 3
mm9_v1_chr5_+_136559785_136559909	3.38673	FOX{I1,J2}.p2	AK154335|Rasa4|54153|RAS p21 protein activator 4	AK155146|Rasa4|54153|RAS p21 protein activator 4	NM_001039103|Rasa4|54153|RAS p21 protein activator 4	NM_133914|Rasa4|54153|RAS p21 protein activator 4	BC049381|Rasa4|54153|RAS p21 protein activator 4	AK014220|Rasa4|54153|RAS p21 protein activator 4	AK133565|Rasa4|54153|RAS p21 protein activator 4	BC027230|Rasa4|54153|RAS p21 protein activator 4	AY591339|Rasa4|54153|RAS p21 protein activator 4	DQ317932|Rasa4|54153|RAS p21 protein activator 4	AK220218|Rasa4|54153|RAS p21 protein activator 4
mm9_v1_chr14_-_111154292_111154370	3.22588	FOX{I1,J2}.p2	AK029275|Slitrk6|239250|SLIT and NTRK-like family, member 6	AK044796|Slitrk6|239250|SLIT and NTRK-like family, member 6	NM_175499|Slitrk6|239250|SLIT and NTRK-like family, member 6
mm9_v1_chr9_-_39411199_39411208	3.18899	FOX{I1,J2}.p2	AK028282|AW551984|244810|expressed sequence AW551984	AK082321|AW551984|244810|expressed sequence AW551984
mm9_v1_chr17_+_36131397_36131470	3.1408	FOX{I1,J2}.p2	AK078380|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	AK020860|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	AK142942|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene	BC055918|A930015D03Rik|77810|RIKEN cDNA A930015D03 gene
mm9_v1_chr8_-_66684789_66684808	3.03531	FOX{I1,J2}.p2	NM_009390|Tll1|21892|tolloid-like	U34042|Tll1|21892|tolloid-like	AK080919|Tll1|21892|tolloid-like
mm9_v1_chr13_+_14705508_14705551	2.89248	FOX{I1,J2}.p2	AK136115|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	NM_008944|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK151883|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK152862|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK167752|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK012990|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK035578|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK154011|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AK012119|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	BC026768|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2	AF099733|Psma2|19166|proteasome (prosome, macropain) subunit, alpha type 2
mm9_v1_chr12_+_71008808_71008844	2.86809	FOX{I1,J2}.p2	AK140185|Atl1|73991|atlastin GTPase 1	AK046919|Atl1|73991|atlastin GTPase 1	BC050784|Atl1|73991|atlastin GTPase 1
mm9_v1_chr10_-_82996846_82996884	2.7657	FOX{I1,J2}.p2	AK141954|Aldh1l2|216188|aldehyde dehydrogenase 1 family, member L2	NM_153543|Aldh1l2|216188|aldehyde dehydrogenase 1 family, member L2
mm9_v1_chr11_+_93905501_93905545	2.73387	FOX{I1,J2}.p2	AK014060|Spag9|70834|sperm associated antigen 9	AK079365|Spag9|70834|sperm associated antigen 9	NM_001025428|Spag9|70834|sperm associated antigen 9	NM_001025429|Spag9|70834|sperm associated antigen 9	NM_001025430|Spag9|70834|sperm associated antigen 9	AK172961|Spag9|70834|sperm associated antigen 9
mm9_v1_chr1_-_134638361_134638397	2.68613	FOX{I1,J2}.p2	AK052440|Nfasc|269116|neurofascin	NM_001160317|Nfasc|269116|neurofascin	NM_182716|Nfasc|269116|neurofascin
mm9_v1_chr16_+_17146981_17147071	2.56778	FOX{I1,J2}.p2	AK032396|Ydjc|69101|YdjC homolog (bacterial)	AK140044|Ydjc|69101|YdjC homolog (bacterial)	BC030425|Ydjc|69101|YdjC homolog (bacterial)	AK007503|Ydjc|69101|YdjC homolog (bacterial)	BC115584|Ydjc|69101|YdjC homolog (bacterial)	BC115585|Ydjc|69101|YdjC homolog (bacterial)	NM_026940|Ydjc|69101|YdjC homolog (bacterial)
mm9_v1_chr13_-_14705281_14705338	2.52899	FOX{I1,J2}.p2	AF279255|Mrpl32|75398|mitochondrial ribosomal protein L32	AK078324|Mrpl32|75398|mitochondrial ribosomal protein L32	AK031791|Mrpl32|75398|mitochondrial ribosomal protein L32	AK002753|Mrpl32|75398|mitochondrial ribosomal protein L32	NM_029271|Mrpl32|75398|mitochondrial ribosomal protein L32	AB049650|Mrpl32|75398|mitochondrial ribosomal protein L32	BC052214|Mrpl32|75398|mitochondrial ribosomal protein L32
mm9_v1_chrX_-_161765324_161765332	2.47031	FOX{I1,J2}.p2	AK139335|Glra2|237213|glycine receptor, alpha 2 subunit
mm9_v1_chr9_-_14185399_14185474	2.36933	FOX{I1,J2}.p2	BC096490|Endod1|71946|endonuclease domain containing 1	AK079741|Endod1|71946|endonuclease domain containing 1	AK078056|Endod1|71946|endonuclease domain containing 1	BC019813|Endod1|71946|endonuclease domain containing 1	AK086102|Endod1|71946|endonuclease domain containing 1
mm9_v1_chr8_+_56040211_56040342	2.28588	FOX{I1,J2}.p2	BC043130|Gpm6a|234267|glycoprotein m6a	AK147245|Gpm6a|234267|glycoprotein m6a	AK147280|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr1_+_155596555_155596633	2.24899	FOX{I1,J2}.p2	AK140815|Rnasel|24014|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)	NM_011882|Rnasel|24014|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)	BC003873|Rnasel|24014|ribonuclease L (2', 5'-oligoisoadenylate synthetase-dependent)
mm9_v1_chr9_-_71743854_71743929	2.24568	FOX{I1,J2}.p2	AK135376|Tcf12|21406|transcription factor 12	AK132002|Tcf12|21406|transcription factor 12	AK133958|Tcf12|21406|transcription factor 12	AK078415|Tcf12|21406|transcription factor 12
mm9_v1_chr7_+_19867963_19867987	2.23502	FOX{I1,J2}.p2	AK165915|Rtn2|20167|reticulon 2 (Z-band associated protein)
mm9_v1_chr12_+_110783593_110783620	2.22231	FOX{I1,J2}.p2	AK018105|Meg3|17263|maternally expressed 3	AK140201|Meg3|17263|maternally expressed 3
mm9_v1_chr7_-_25084361_25084383	2.19314	FOX{I1,J2}.p2	AK149960|Zfp61|22719|zinc finger protein 61	AK148158|Zfp61|22719|zinc finger protein 61
mm9_v1_chr18_+_45428413_45428658	2.18427	FOX{I1,J2}.p2	AK076494|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2	AK033158|Kcnn2|140492|potassium intermediate/small conductance calcium-activated channel, subfamily N, member 2
mm9_v1_chr6_-_55631085_55631098	2.14387	FOX{I1,J2}.p2	AK144377|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr9_-_101154115_101154130	2.14015	FOX{I1,J2}.p2	AK042943|Ppp2r3a|235542|protein phosphatase 2, regulatory subunit B'', alpha
mm9_v1_chr12_+_72149332_72149349	2.07853	FOX{I1,J2}.p2	AK149171|Arid4a|238247|AT rich interactive domain 4A (RBP1-like)
mm9_v1_chr2_-_24618566_24618692	2.04273	FOX{I1,J2}.p2	AF042317|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	NM_001042528|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	NM_007579|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit	U04999|Cacna1b|12287|calcium channel, voltage-dependent, N type, alpha 1B subunit
mm9_v1_chr6_+_49772688_49772727	2.04184	FOX{I1,J2}.p2	AK002982|Npy|109648|neuropeptide Y	BC043012|Npy|109648|neuropeptide Y	NM_023456|Npy|109648|neuropeptide Y
mm9_v1_chr17_-_33855557_33855658	2.0349	FOX{I1,J2}.p2	BC002144|March2|224703|membrane-associated ring finger (C3HC4) 2	AK053434|March2|224703|membrane-associated ring finger (C3HC4) 2	AK079234|March2|224703|membrane-associated ring finger (C3HC4) 2	AK081495|March2|224703|membrane-associated ring finger (C3HC4) 2	AK036614|March2|224703|membrane-associated ring finger (C3HC4) 2	AK039778|March2|224703|membrane-associated ring finger (C3HC4) 2	AK040163|March2|224703|membrane-associated ring finger (C3HC4) 2	NM_145486|March2|224703|membrane-associated ring finger (C3HC4) 2
mm9_v1_chr17_-_33170297_33170352	2.02844	FOX{I1,J2}.p2	BC056193|Zfp763|73451|zinc finger protein 763	AK088750|Zfp763|73451|zinc finger protein 763	AK141711|Zfp763|73451|zinc finger protein 763	NM_028543|Zfp763|73451|zinc finger protein 763
mm9_v1_chr11_-_98190774_98191090	2.01016	FOX{I1,J2}.p2	D83507|Neurod2|18013|neurogenic differentiation 2	BC058965|Neurod2|18013|neurogenic differentiation 2	NM_010895|Neurod2|18013|neurogenic differentiation 2	U58471|Neurod2|18013|neurogenic differentiation 2	AK158767|Neurod2|18013|neurogenic differentiation 2
mm9_v1_chr16_-_4679664_4679776	2.00751	FOX{I1,J2}.p2	AK143624|Coro7|78885|coronin 7	AK018739|Coro7|78885|coronin 7	AK088155|Coro7|78885|coronin 7	AK041000|Coro7|78885|coronin 7	AK037894|Coro7|78885|coronin 7	BC061006|Coro7|78885|coronin 7	NM_030205|Coro7|78885|coronin 7	AK040408|Coro7|78885|coronin 7	AK150051|Coro7|78885|coronin 7	AK039585|Coro7|78885|coronin 7
mm9_v1_chr11_+_31900378_31900504	1.99337	FOX{I1,J2}.p2	AK088499|Nsg2|18197|neuron specific gene family member 2	NM_008741|Nsg2|18197|neuron specific gene family member 2	U17259|Nsg2|18197|neuron specific gene family member 2	AK049679|Nsg2|18197|neuron specific gene family member 2	AK075612|Nsg2|18197|neuron specific gene family member 2	AK160712|Nsg2|18197|neuron specific gene family member 2	BC018224|Nsg2|18197|neuron specific gene family member 2	AK041338|Nsg2|18197|neuron specific gene family member 2
mm9_v1_chr14_+_84843366_84843370	1.96922	FOX{I1,J2}.p2	AK142358|Pcdh17|219228|protocadherin 17	AK147265|Pcdh17|219228|protocadherin 17	NM_001013753|Pcdh17|219228|protocadherin 17
mm9_v1_chr12_-_73509668_73509745	1.95962	FOX{I1,J2}.p2	BC053926|Rtn1|104001|reticulon 1	BC058579|Rtn1|104001|reticulon 1
mm9_v1_chr9_-_113935832_113935880	1.95478	FOX{I1,J2}.p2	AK013142|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK089994|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC145665|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC145998|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK045742|Fbxl2|72179|F-box and leucine-rich repeat protein 2	BC096582|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK141177|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK163472|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK044693|Fbxl2|72179|F-box and leucine-rich repeat protein 2	AK039010|Fbxl2|72179|F-box and leucine-rich repeat protein 2	NM_178624|Fbxl2|72179|F-box and leucine-rich repeat protein 2
mm9_v1_chr8_-_108282498_108282528	1.88201	FOX{I1,J2}.p2	AK017684|Gfod2|70575|glucose-fructose oxidoreductase domain containing 2	AK141521|Gfod2|70575|glucose-fructose oxidoreductase domain containing 2	NM_027469|Gfod2|70575|glucose-fructose oxidoreductase domain containing 2	BC013623|Gfod2|70575|glucose-fructose oxidoreductase domain containing 2
mm9_v1_chr13_-_53076251_53076471	1.86167	FOX{I1,J2}.p2	BC031377|Nfil3|18030|nuclear factor, interleukin 3, regulated	AK087541|Nfil3|18030|nuclear factor, interleukin 3, regulated	NM_017373|Nfil3|18030|nuclear factor, interleukin 3, regulated
mm9_v1_chr9_+_45646611_45646685	1.79162	FOX{I1,J2}.p2	NM_001145947|Bace1|23821|beta-site APP cleaving enzyme 1	NM_011792|Bace1|23821|beta-site APP cleaving enzyme 1	AK033112|Bace1|23821|beta-site APP cleaving enzyme 1	AK041285|Bace1|23821|beta-site APP cleaving enzyme 1	AK080498|Bace1|23821|beta-site APP cleaving enzyme 1	AK082317|Bace1|23821|beta-site APP cleaving enzyme 1	AK163583|Bace1|23821|beta-site APP cleaving enzyme 1	AK046175|Bace1|23821|beta-site APP cleaving enzyme 1	AK082230|Bace1|23821|beta-site APP cleaving enzyme 1	AK049626|Bace1|23821|beta-site APP cleaving enzyme 1	AF190726|Bace1|23821|beta-site APP cleaving enzyme 1	AK014464|Bace1|23821|beta-site APP cleaving enzyme 1	BC048189|Bace1|23821|beta-site APP cleaving enzyme 1
mm9_v1_chr2_+_174153230_174153414	1.79144	FOX{I1,J2}.p2	AK020895|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AF124383|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AK086715|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	BC062654|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus	AY682719|Gnas|14683|GNAS (guanine nucleotide binding protein, alpha stimulating) complex locus
mm9_v1_chr5_+_48374328_48374415	1.77866	FOX{I1,J2}.p2	AK053182|Slit2|20563|slit homolog 2 (Drosophila)	AK053913|Slit2|20563|slit homolog 2 (Drosophila)	AK144573|Slit2|20563|slit homolog 2 (Drosophila)	NM_178804|Slit2|20563|slit homolog 2 (Drosophila)	AK084012|Slit2|20563|slit homolog 2 (Drosophila)	AK084293|Slit2|20563|slit homolog 2 (Drosophila)
mm9_v1_chr2_+_158201373_158201515	1.7725	FOX{I1,J2}.p2	NM_175692|Snhg11|319317|small nucleolar RNA host gene 11	AK157790|Snhg11|319317|small nucleolar RNA host gene 11	AK080745|Snhg11|319317|small nucleolar RNA host gene 11	AK133939|Snhg11|319317|small nucleolar RNA host gene 11	AK138473|Snhg11|319317|small nucleolar RNA host gene 11	BC049241|Snhg11|319317|small nucleolar RNA host gene 11	BC030414|Snhg11|319317|small nucleolar RNA host gene 11
mm9_v1_chr6_+_129483154_129483185	1.7629	FOX{I1,J2}.p2	AK168921|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AF180518|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AB041648|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr6_-_142650737_142650793	1.75448	FOX{I1,J2}.p2	D86037|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	D86038|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	AF003531|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	U97066|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_001044720|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_011511|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_021041|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9	NM_021042|Abcc9|20928|ATP-binding cassette, sub-family C (CFTR/MRP), member 9
mm9_v1_chr15_-_98783909_98783984	1.72599	FOX{I1,J2}.p2	M13445|Tuba1a|22142|tubulin, alpha 1A	NM_011653|Tuba1a|22142|tubulin, alpha 1A	AK077529|Tuba1a|22142|tubulin, alpha 1A	BC056169|Tuba1a|22142|tubulin, alpha 1A	BC083344|Tuba1a|22142|tubulin, alpha 1A	BC083343|Tuba1a|22142|tubulin, alpha 1A	BC085256|Tuba1a|22142|tubulin, alpha 1A	BC083345|Tuba1a|22142|tubulin, alpha 1A	AK145404|Tuba1a|22142|tubulin, alpha 1A	AK146983|Tuba1a|22142|tubulin, alpha 1A	AK167687|Tuba1a|22142|tubulin, alpha 1A	AK168762|Tuba1a|22142|tubulin, alpha 1A	AK169610|Tuba1a|22142|tubulin, alpha 1A	AK164335|Tuba1a|22142|tubulin, alpha 1A
mm9_v1_chr1_+_129101570_129101606	1.69396	FOX{I1,J2}.p2	AK049587|Mgat5|107895|mannoside acetylglucosaminyltransferase 5	AK030402|Mgat5|107895|mannoside acetylglucosaminyltransferase 5	AK036567|Mgat5|107895|mannoside acetylglucosaminyltransferase 5
mm9_v1_chr11_-_86887549_86887638	1.66846	FOX{I1,J2}.p2	BC016541|Gdpd1|66569|glycerophosphodiester phosphodiesterase domain containing 1	AK011487|Gdpd1|66569|glycerophosphodiester phosphodiesterase domain containing 1	AK013864|Gdpd1|66569|glycerophosphodiester phosphodiesterase domain containing 1	AK016023|Gdpd1|66569|glycerophosphodiester phosphodiesterase domain containing 1	AK167812|Gdpd1|66569|glycerophosphodiester phosphodiesterase domain containing 1	NM_025638|Gdpd1|66569|glycerophosphodiester phosphodiesterase domain containing 1
mm9_v1_chr5_+_89012600_89012641	1.65813	FOX{I1,J2}.p2	AK045610|Rufy3|52822|RUN and FYVE domain containing 3	AK083242|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr13_-_48608762_48608790	1.63909	FOX{I1,J2}.p2	BC060222|Zfp169|67911|zinc finger protein 169	NM_001164575|Zfp169|67911|zinc finger protein 169
mm9_v1_chr1_-_64167952_64168022	1.62892	FOX{I1,J2}.p2	BC019604|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	NM_033563|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC004700|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	BC040794|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AF338369|Klf7|93691|Kruppel-like factor 7 (ubiquitous)	AK149362|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr4_+_134479504_134479540	1.61927	FOX{I1,J2}.p2	AK028145|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK003799|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK012363|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK150024|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK160993|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK169598|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK169760|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	NM_023665|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK029529|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr16_-_23520662_23520727	1.60642	FOX{I1,J2}.p2	BC131637|Masp1|17174|mannan-binding lectin serine peptidase 1	BC131638|Masp1|17174|mannan-binding lectin serine peptidase 1	NM_008555|Masp1|17174|mannan-binding lectin serine peptidase 1	AK032944|Masp1|17174|mannan-binding lectin serine peptidase 1	AB049755|Masp1|17174|mannan-binding lectin serine peptidase 1	D16492|Masp1|17174|mannan-binding lectin serine peptidase 1	AK043055|Masp1|17174|mannan-binding lectin serine peptidase 1	AK031598|Masp1|17174|mannan-binding lectin serine peptidase 1
mm9_v1_chr4_-_88368313_88368424	1.59884	FOX{I1,J2}.p2	AK129338|Klhl9|242521|kelch-like 9 (Drosophila)	BC094556|Klhl9|242521|kelch-like 9 (Drosophila)	AK049803|Klhl9|242521|kelch-like 9 (Drosophila)	AK033231|Klhl9|242521|kelch-like 9 (Drosophila)	NM_172871|Klhl9|242521|kelch-like 9 (Drosophila)
mm9_v1_chr3_-_152645143_152645180	1.59473	FOX{I1,J2}.p2	AB028840|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	BC055737|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	NM_012028|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AB030836|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK034387|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5	AK038434|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm9_v1_chr6_+_14851348_14851478	1.56091	FOX{I1,J2}.p2	NM_053242|Foxp2|114142|forkhead box P2	AK051668|Foxp2|114142|forkhead box P2	AK085080|Foxp2|114142|forkhead box P2	AK080549|Foxp2|114142|forkhead box P2
mm9_v1_chr12_+_25659777_25659836	1.5307	FOX{I1,J2}.p2	AK021172|Kidins220|77480|kinase D-interacting substrate 220	NM_001081378|Kidins220|77480|kinase D-interacting substrate 220	BC157898|Kidins220|77480|kinase D-interacting substrate 220
mm9_v1_chr1_+_171585621_171585677	1.52936	FOX{I1,J2}.p2	AK004165|Rgs5|19737|regulator of G-protein signaling 5	AK028765|Rgs5|19737|regulator of G-protein signaling 5	AK030300|Rgs5|19737|regulator of G-protein signaling 5	AK044096|Rgs5|19737|regulator of G-protein signaling 5	AK054098|Rgs5|19737|regulator of G-protein signaling 5	NM_009063|Rgs5|19737|regulator of G-protein signaling 5	BC037683|Rgs5|19737|regulator of G-protein signaling 5	U67188|Rgs5|19737|regulator of G-protein signaling 5
mm9_v1_chr16_-_16829386_16829548	1.51642	FOX{I1,J2}.p2	AF173866|Spag6|50525|sperm associated antigen 6	BC090660|Spag6|50525|sperm associated antigen 6	AK053966|Spag6|50525|sperm associated antigen 6	AK005732|Spag6|50525|sperm associated antigen 6	BC100455|Spag6|50525|sperm associated antigen 6	AK054199|Spag6|50525|sperm associated antigen 6	NM_015773|Spag6|50525|sperm associated antigen 6	AK164680|Spag6|50525|sperm associated antigen 6
mm9_v1_chr17_-_32557916_32557924	1.48905	FOX{I1,J2}.p2	AF149837|Pglyrp2|57757|peptidoglycan recognition protein 2	AF149838|Pglyrp2|57757|peptidoglycan recognition protein 2	AF315578|Pglyrp2|57757|peptidoglycan recognition protein 2	AF315584|Pglyrp2|57757|peptidoglycan recognition protein 2	AF317548|Pglyrp2|57757|peptidoglycan recognition protein 2	AK050019|Pglyrp2|57757|peptidoglycan recognition protein 2	NM_021319|Pglyrp2|57757|peptidoglycan recognition protein 2
mm9_v1_chr10_-_78560301_78560348	1.43425	FOX{I1,J2}.p2	BC082302|2610008E11Rik|72128|RIKEN cDNA 2610008E11 gene	AK148309|2610008E11Rik|72128|RIKEN cDNA 2610008E11 gene	NM_001004362|2610008E11Rik|72128|RIKEN cDNA 2610008E11 gene
mm9_v1_chr1_-_42749940_42749978	1.41321	FOX{I1,J2}.p2	BC059892|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene	BC058417|2610017I09Rik|66297|RIKEN cDNA 2610017I09 gene
mm9_v1_chr3_+_7366586_7366727	1.39844	FOX{I1,J2}.p2	NM_008862|Pkia|18767|protein kinase inhibitor, alpha	BC048244|Pkia|18767|protein kinase inhibitor, alpha	AK139347|Pkia|18767|protein kinase inhibitor, alpha
mm9_v1_chr18_-_43552694_43552984	1.36231	FOX{I1,J2}.p2	BC023003|Dpysl3|22240|dihydropyrimidinase-like 3	NM_009468|Dpysl3|22240|dihydropyrimidinase-like 3	X87817|Dpysl3|22240|dihydropyrimidinase-like 3
mm9_v1_chrX_+_130939318_130939458	1.3455	FOX{I1,J2}.p2	AK038488|Drp2|13497|dystrophin related protein 2	NM_010078|Drp2|13497|dystrophin related protein 2	AK081426|Drp2|13497|dystrophin related protein 2	AK034383|Drp2|13497|dystrophin related protein 2	BC125345|Drp2|13497|dystrophin related protein 2	BC125347|Drp2|13497|dystrophin related protein 2
mm9_v1_chrX_+_35954355_35954475	1.32058	FOX{I1,J2}.p2	AK138385|Mcts1|68995|malignant T cell amplified sequence 1	BC037103|Mcts1|68995|malignant T cell amplified sequence 1
mm9_v1_chr3_-_131006068_131006148	1.27512	FOX{I1,J2}.p2	AK142740|Cyp2u1|71519|cytochrome P450, family 2, subfamily u, polypeptide 1	AK018458|Cyp2u1|71519|cytochrome P450, family 2, subfamily u, polypeptide 1	AK041477|Cyp2u1|71519|cytochrome P450, family 2, subfamily u, polypeptide 1	NM_027816|Cyp2u1|71519|cytochrome P450, family 2, subfamily u, polypeptide 1
mm9_v1_chrX_-_9793824_9794045	1.25556	FOX{I1,J2}.p2	AJ238396|Rpgr|19893|retinitis pigmentosa GTPase regulator	AF044677|Rpgr|19893|retinitis pigmentosa GTPase regulator	BC012661|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK136298|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK017192|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK081631|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK038652|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177950|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177951|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177953|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_001177954|Rpgr|19893|retinitis pigmentosa GTPase regulator	NM_011285|Rpgr|19893|retinitis pigmentosa GTPase regulator	AK029864|Rpgr|19893|retinitis pigmentosa GTPase regulator
mm9_v1_chr6_+_36338053_36338083	1.25471	FOX{I1,J2}.p2	BC019470|Chrm2|243764|cholinergic receptor, muscarinic 2, cardiac
mm9_v1_chr9_+_113721698_113721717	1.24674	FOX{I1,J2}.p2	AK043551|Clasp2|76499|CLIP associating protein 2	AK148966|Clasp2|76499|CLIP associating protein 2	AK164326|Clasp2|76499|CLIP associating protein 2	NM_001081960|Clasp2|76499|CLIP associating protein 2	NM_029633|Clasp2|76499|CLIP associating protein 2	BC117963|Clasp2|76499|CLIP associating protein 2	BC117964|Clasp2|76499|CLIP associating protein 2	BC131791|Clasp2|76499|CLIP associating protein 2	BC131792|Clasp2|76499|CLIP associating protein 2	BC141415|Clasp2|76499|CLIP associating protein 2
mm9_v1_chrX_+_106290703_106290922	1.24458	FOX{I1,J2}.p2	BC043055|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	NM_019989|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK218315|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	BC034161|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151871|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK165995|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK146588|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK150604|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151095|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK049929|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AK151501|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like	AJ272504|Sh3bgrl|56726|SH3-binding domain glutamic acid-rich protein like
mm9_v1_chr1_-_64167818_64167853	1.24045	FOX{I1,J2}.p2	AF327568|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr15_-_89026839_89026926	1.23691	FOX{I1,J2}.p2	BC030395|Fam116b|69440|family with sequence similarity 116, member B	BC139003|Fam116b|69440|family with sequence similarity 116, member B	AK084555|Fam116b|69440|family with sequence similarity 116, member B	NM_027081|Fam116b|69440|family with sequence similarity 116, member B	AK154949|Fam116b|69440|family with sequence similarity 116, member B
mm9_v1_chr12_-_73509925_73510040	1.22739	FOX{I1,J2}.p2	NM_153457|Rtn1|104001|reticulon 1	AK132364|Rtn1|104001|reticulon 1
mm9_v1_chr4_-_107743887_107743940	1.21405	FOX{I1,J2}.p2	AK002425|Scp2|20280|sterol carrier protein 2, liver
mm9_v1_chr9_-_78226334_78226394	1.2085	FOX{I1,J2}.p2	AB283026|Ooep|67968|oocyte expressed protein homolog (dog)	BC062245|Ooep|67968|oocyte expressed protein homolog (dog)	AK133554|Ooep|67968|oocyte expressed protein homolog (dog)	AK135950|Ooep|67968|oocyte expressed protein homolog (dog)	AK136199|Ooep|67968|oocyte expressed protein homolog (dog)	AK145510|Ooep|67968|oocyte expressed protein homolog (dog)	AK010266|Ooep|67968|oocyte expressed protein homolog (dog)	AK010809|Ooep|67968|oocyte expressed protein homolog (dog)	DQ238107|Ooep|67968|oocyte expressed protein homolog (dog)	NM_026480|Ooep|67968|oocyte expressed protein homolog (dog)
mm9_v1_chr15_-_90509751_90509818	1.18362	FOX{I1,J2}.p2	AK005311|Cpne8|66871|copine VIII	BC076564|Cpne8|66871|copine VIII	BC017626|Cpne8|66871|copine VIII	AK013407|Cpne8|66871|copine VIII	AK004559|Cpne8|66871|copine VIII	BC138745|Cpne8|66871|copine VIII	BC138746|Cpne8|66871|copine VIII	AK010227|Cpne8|66871|copine VIII	BC048551|Cpne8|66871|copine VIII	NM_001033851|Cpne8|66871|copine VIII	NM_025815|Cpne8|66871|copine VIII
mm9_v1_chr6_+_96063137_96063148	1.18047	FOX{I1,J2}.p2	AK050001|Fam19a1|320265|family with sequence similarity 19, member A1	NM_182808|Fam19a1|320265|family with sequence similarity 19, member A1
mm9_v1_chr1_-_128634766_128634787	1.1707	FOX{I1,J2}.p2	AK083792|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr6_+_53523365_53523387	1.16973	FOX{I1,J2}.p2	AK052230|Creb5|231991|cAMP responsive element binding protein 5	AK052451|Creb5|231991|cAMP responsive element binding protein 5	AK154148|Creb5|231991|cAMP responsive element binding protein 5	NM_172728|Creb5|231991|cAMP responsive element binding protein 5	AK170128|Creb5|231991|cAMP responsive element binding protein 5	AK155537|Creb5|231991|cAMP responsive element binding protein 5	BC098487|Creb5|231991|cAMP responsive element binding protein 5
mm9_v1_chr18_+_37133455_37133703	1.1689	FOX{I1,J2}.p2	BC080863|Pcdha7|12939|protocadherin alpha 7	AY013765|Pcdha7|12939|protocadherin alpha 7	NM_009957|Pcdha7|12939|protocadherin alpha 7	AB008179|Pcdha7|12939|protocadherin alpha 7	EU854476|Pcdha7|12939|protocadherin alpha 7
mm9_v1_chr7_-_36103433_36103463	1.15748	FOX{I1,J2}.p2	BC100577|Gpatch1|67471|G patch domain containing 1	AK154571|Gpatch1|67471|G patch domain containing 1	AK014367|Gpatch1|67471|G patch domain containing 1	BC125584|Gpatch1|67471|G patch domain containing 1	BC132155|Gpatch1|67471|G patch domain containing 1	AK004868|Gpatch1|67471|G patch domain containing 1	NM_026181|Gpatch1|67471|G patch domain containing 1
mm9_v1_chr18_-_36926866_36926900	1.1467	FOX{I1,J2}.p2	
mm9_v1_chr19_-_17912073_17912162	1.13548	FOX{I1,J2}.p2	AK086210|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK087337|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	AK143998|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001163144|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5	NM_001190483|Pcsk5|18552|proprotein convertase subtilisin/kexin type 5
mm9_v1_chr8_+_56040193_56040201	1.13311	FOX{I1,J2}.p2	AK081877|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr17_+_46848407_46848441	1.13302	FOX{I1,J2}.p2	BC003424|Pex6|224824|peroxisomal biogenesis factor 6	NM_145488|Pex6|224824|peroxisomal biogenesis factor 6	AK083898|Pex6|224824|peroxisomal biogenesis factor 6	AK143173|Pex6|224824|peroxisomal biogenesis factor 6	AK030565|Pex6|224824|peroxisomal biogenesis factor 6	AK220525|Pex6|224824|peroxisomal biogenesis factor 6
mm9_v1_chr4_+_28740280_28740313	1.11152	FOX{I1,J2}.p2	AK033903|Epha7|13841|Eph receptor A7	NM_001122889|Epha7|13841|Eph receptor A7	NM_010141|Epha7|13841|Eph receptor A7	X79082|Epha7|13841|Eph receptor A7	X79083|Epha7|13841|Eph receptor A7	X79084|Epha7|13841|Eph receptor A7
mm9_v1_chr2_-_113878535_113878550	1.10978	FOX{I1,J2}.p2	BC062138|Actc1|11464|actin, alpha, cardiac muscle 1	AK014303|Actc1|11464|actin, alpha, cardiac muscle 1	AK146496|Actc1|11464|actin, alpha, cardiac muscle 1	AK146899|Actc1|11464|actin, alpha, cardiac muscle 1	AK168637|Actc1|11464|actin, alpha, cardiac muscle 1	AK168661|Actc1|11464|actin, alpha, cardiac muscle 1	AK168831|Actc1|11464|actin, alpha, cardiac muscle 1	AK169161|Actc1|11464|actin, alpha, cardiac muscle 1	AK169165|Actc1|11464|actin, alpha, cardiac muscle 1	BC100600|Actc1|11464|actin, alpha, cardiac muscle 1	NM_009608|Actc1|11464|actin, alpha, cardiac muscle 1	AK014307|Actc1|11464|actin, alpha, cardiac muscle 1
mm9_v1_chr17_+_22099525_22099724	1.09963	FOX{I1,J2}.p2	AK036434|Zfp943|74670|zinc finger prtoein 943	NM_001025373|Zfp943|74670|zinc finger prtoein 943	AK015297|Zfp943|74670|zinc finger prtoein 943	BC038865|Zfp943|74670|zinc finger prtoein 943	BC066031|Zfp943|74670|zinc finger prtoein 943
mm9_v1_chr13_-_48608795_48608824	1.09712	FOX{I1,J2}.p2	AK162962|Zfp169|67911|zinc finger protein 169	AK086737|Zfp169|67911|zinc finger protein 169	NM_001164576|Zfp169|67911|zinc finger protein 169	NM_026450|Zfp169|67911|zinc finger protein 169
mm9_v1_chr10_+_122701051_122701245	1.09369	FOX{I1,J2}.p2	AK139403|Fam19a2|268354|family with sequence similarity 19, member A2	NM_182807|Fam19a2|268354|family with sequence similarity 19, member A2	AK140763|Fam19a2|268354|family with sequence similarity 19, member A2	BC027082|Fam19a2|268354|family with sequence similarity 19, member A2
mm9_v1_chr2_-_29904342_29904416	1.09028	FOX{I1,J2}.p2	BC085113|Wdr34|71820|WD repeat domain 34	AK014304|Wdr34|71820|WD repeat domain 34	NM_001008498|Wdr34|71820|WD repeat domain 34
mm9_v1_chr2_+_70400179_70400352	1.08328	FOX{I1,J2}.p2	AK054554|Gad1|14415|glutamic acid decarboxylase 1	NM_008077|Gad1|14415|glutamic acid decarboxylase 1	AK148497|Gad1|14415|glutamic acid decarboxylase 1	AK160868|Gad1|14415|glutamic acid decarboxylase 1	AK136801|Gad1|14415|glutamic acid decarboxylase 1	BC027059|Gad1|14415|glutamic acid decarboxylase 1	AF326547|Gad1|14415|glutamic acid decarboxylase 1	AF326548|Gad1|14415|glutamic acid decarboxylase 1	Z49976|Gad1|14415|glutamic acid decarboxylase 1
mm9_v1_chr6_+_129483295_129483425	1.07598	FOX{I1,J2}.p2	AK006103|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK014083|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK015049|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr18_+_23468585_23468619	1.07033	FOX{I1,J2}.p2	AK147279|Dtna|13527|dystrobrevin alpha
mm9_v1_chr9_-_60535274_60535340	1.05914	FOX{I1,J2}.p2	AK051325|Lrrc49|102747|leucine rich repeat containing 49	NM_001146047|Lrrc49|102747|leucine rich repeat containing 49
mm9_v1_chr16_-_67621054_67621188	1.05516	FOX{I1,J2}.p2	AK046800|Cadm2|239857|cell adhesion molecule 2	AK163636|Cadm2|239857|cell adhesion molecule 2	AK038842|Cadm2|239857|cell adhesion molecule 2	AK043760|Cadm2|239857|cell adhesion molecule 2	AK165030|Cadm2|239857|cell adhesion molecule 2	NM_001145977|Cadm2|239857|cell adhesion molecule 2	NM_178721|Cadm2|239857|cell adhesion molecule 2
mm9_v1_chr11_+_22872016_22872058	1.05325	FOX{I1,J2}.p2	NM_011663|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1	D17407|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1	S69507|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1
mm9_v1_chr10_+_80639388_80639392	1.04926	FOX{I1,J2}.p2	AK032997|Eef2|13629|eukaryotic translation elongation factor 2	AK040474|Eef2|13629|eukaryotic translation elongation factor 2	AK077866|Eef2|13629|eukaryotic translation elongation factor 2	AK087985|Eef2|13629|eukaryotic translation elongation factor 2	AK128976|Eef2|13629|eukaryotic translation elongation factor 2	AK134195|Eef2|13629|eukaryotic translation elongation factor 2	AK144874|Eef2|13629|eukaryotic translation elongation factor 2	AK145509|Eef2|13629|eukaryotic translation elongation factor 2	AK145545|Eef2|13629|eukaryotic translation elongation factor 2	AK146508|Eef2|13629|eukaryotic translation elongation factor 2	AK149659|Eef2|13629|eukaryotic translation elongation factor 2	AK150136|Eef2|13629|eukaryotic translation elongation factor 2	AK150902|Eef2|13629|eukaryotic translation elongation factor 2	AK151487|Eef2|13629|eukaryotic translation elongation factor 2	AK151945|Eef2|13629|eukaryotic translation elongation factor 2	AK152146|Eef2|13629|eukaryotic translation elongation factor 2	AK152447|Eef2|13629|eukaryotic translation elongation factor 2	AK152587|Eef2|13629|eukaryotic translation elongation factor 2	AK152826|Eef2|13629|eukaryotic translation elongation factor 2	AK153275|Eef2|13629|eukaryotic translation elongation factor 2	AK153936|Eef2|13629|eukaryotic translation elongation factor 2	AK155325|Eef2|13629|eukaryotic translation elongation factor 2	AK159155|Eef2|13629|eukaryotic translation elongation factor 2	AK159421|Eef2|13629|eukaryotic translation elongation factor 2	AK159514|Eef2|13629|eukaryotic translation elongation factor 2	AK159806|Eef2|13629|eukaryotic translation elongation factor 2	AK159829|Eef2|13629|eukaryotic translation elongation factor 2	AK163063|Eef2|13629|eukaryotic translation elongation factor 2	AK166212|Eef2|13629|eukaryotic translation elongation factor 2	AK166595|Eef2|13629|eukaryotic translation elongation factor 2	AK166596|Eef2|13629|eukaryotic translation elongation factor 2	AK166719|Eef2|13629|eukaryotic translation elongation factor 2	AK166747|Eef2|13629|eukaryotic translation elongation factor 2	AK166758|Eef2|13629|eukaryotic translation elongation factor 2	AK166788|Eef2|13629|eukaryotic translation elongation factor 2	AK166815|Eef2|13629|eukaryotic translation elongation factor 2	AK166829|Eef2|13629|eukaryotic translation elongation factor 2	AK166968|Eef2|13629|eukaryotic translation elongation factor 2	AK167081|Eef2|13629|eukaryotic translation elongation factor 2	AK167093|Eef2|13629|eukaryotic translation elongation factor 2	AK167109|Eef2|13629|eukaryotic translation elongation factor 2	AK167115|Eef2|13629|eukaryotic translation elongation factor 2	AK167199|Eef2|13629|eukaryotic translation elongation factor 2	AK167221|Eef2|13629|eukaryotic translation elongation factor 2	AK167230|Eef2|13629|eukaryotic translation elongation factor 2	AK168527|Eef2|13629|eukaryotic translation elongation factor 2	AK168615|Eef2|13629|eukaryotic translation elongation factor 2	AK168638|Eef2|13629|eukaryotic translation elongation factor 2	AK168659|Eef2|13629|eukaryotic translation elongation factor 2	AK168794|Eef2|13629|eukaryotic translation elongation factor 2	AK168827|Eef2|13629|eukaryotic translation elongation factor 2	AK166851|Eef2|13629|eukaryotic translation elongation factor 2	AK167208|Eef2|13629|eukaryotic translation elongation factor 2	AK167281|Eef2|13629|eukaryotic translation elongation factor 2	AK166751|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr13_-_53472732_53472776	1.04916	FOX{I1,J2}.p2	AK084391|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AF003823|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK089030|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK053207|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK028713|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK161140|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1
mm9_v1_chr11_+_93905557_93905590	1.03133	FOX{I1,J2}.p2	BC052058|Spag9|70834|sperm associated antigen 9	BC060100|Spag9|70834|sperm associated antigen 9	BC094670|Spag9|70834|sperm associated antigen 9
mm9_v1_chr4_+_109015660_109015680	1.02853	FOX{I1,J2}.p2	NM_001159964|Eps15|13858|epidermal growth factor receptor pathway substrate 15	AK083176|Eps15|13858|epidermal growth factor receptor pathway substrate 15
mm9_v1_chr4_+_28740314_28740475	1.02105	FOX{I1,J2}.p2	AK030480|Epha7|13841|Eph receptor A7	AK049848|Epha7|13841|Eph receptor A7	BC026153|Epha7|13841|Eph receptor A7	AK032973|Epha7|13841|Eph receptor A7
mm9_v1_chr5_-_5265981_5266073	1.00787	FOX{I1,J2}.p2	AK083269|Cdk14|18647|cyclin-dependent kinase 14	AK139386|Cdk14|18647|cyclin-dependent kinase 14	BC068134|Cdk14|18647|cyclin-dependent kinase 14	AK138437|Cdk14|18647|cyclin-dependent kinase 14
mm9_v1_chr13_+_120251565_120251614	1.00586	FOX{I1,J2}.p2	AK008565|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	NM_001113550|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	NM_026127|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK008588|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK149119|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK020163|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK146515|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK014735|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	BC021327|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK017802|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK160863|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK008746|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	BC028328|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene	AK215837|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene
mm9_v1_chr4_-_12099125_12099161	0.998397	FOX{I1,J2}.p2	AK032690|Fam92a|68099|family with sequence similarity 92, member A	AK078438|Fam92a|68099|family with sequence similarity 92, member A	AK088705|Fam92a|68099|family with sequence similarity 92, member A	NM_026558|Fam92a|68099|family with sequence similarity 92, member A
mm9_v1_chr9_-_102256962_102257026	0.997595	FOX{I1,J2}.p2	BC057301|Ephb1|270190|Eph receptor B1	AK135018|Ephb1|270190|Eph receptor B1	AK033966|Ephb1|270190|Eph receptor B1	AK036211|Ephb1|270190|Eph receptor B1	AK082061|Ephb1|270190|Eph receptor B1	AK039530|Ephb1|270190|Eph receptor B1	NM_001168296|Ephb1|270190|Eph receptor B1	NM_173447|Ephb1|270190|Eph receptor B1
mm9_v1_chr11_-_98590680_98590748	0.988938	FOX{I1,J2}.p2	AF126543|Med24|23989|mediator complex subunit 24	AK193218|Med24|23989|mediator complex subunit 24	AK020269|Med24|23989|mediator complex subunit 24	AK154618|Med24|23989|mediator complex subunit 24	AK158385|Med24|23989|mediator complex subunit 24	NM_011869|Med24|23989|mediator complex subunit 24
mm9_v1_chr2_+_138104219_138104260	0.976481	FOX{I1,J2}.p2	AB093275|Btbd3|228662|BTB (POZ) domain containing 3	NM_145534|Btbd3|228662|BTB (POZ) domain containing 3	BC018174|Btbd3|228662|BTB (POZ) domain containing 3
mm9_v1_chr16_+_56075576_56075640	0.972052	FOX{I1,J2}.p2	AK012740|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK085060|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK013090|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK122542|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK010813|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK164100|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK020068|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK083086|Senp7|66315|SUMO1/sentrin specific peptidase 7	AK164354|Senp7|66315|SUMO1/sentrin specific peptidase 7	BC058593|Senp7|66315|SUMO1/sentrin specific peptidase 7
mm9_v1_chr10_+_126602182_126602286	0.971797	FOX{I1,J2}.p2	AK144484|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	BC057199|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	NM_008080|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1	BC019969|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm9_v1_chr9_-_99776467_99776588	0.970809	FOX{I1,J2}.p2	BC069948|Sox14|20669|SRY-box containing gene 14	AK138208|Sox14|20669|SRY-box containing gene 14	BC055767|Sox14|20669|SRY-box containing gene 14	BC083360|Sox14|20669|SRY-box containing gene 14	BC100555|Sox14|20669|SRY-box containing gene 14	NM_011440|Sox14|20669|SRY-box containing gene 14
mm9_v1_chr11_+_58680717_58680792	0.965686	FOX{I1,J2}.p2	AK030099|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene	AK134479|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene	BC058081|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene	NM_172403|2810021J22Rik|69944|RIKEN cDNA 2810021J22 gene
mm9_v1_chr18_+_37607310_37607496	0.961974	FOX{I1,J2}.p2	AK032156|Pcdhb14|93885|protocadherin beta 14	NM_053139|Pcdhb14|93885|protocadherin beta 14	AK008662|Pcdhb14|93885|protocadherin beta 14	BC059821|Pcdhb14|93885|protocadherin beta 14	AK083065|Pcdhb14|93885|protocadherin beta 14	AY013775|Pcdhb14|93885|protocadherin beta 14
mm9_v1_chr10_-_30320470_30320554	0.958574	FOX{I1,J2}.p2	BC048703|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	AK014181|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	AK010722|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	AK032943|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	AF532979|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)	NM_028604|Trmt11|73681|tRNA methyltransferase 11 homolog (S. cerevisiae)
mm9_v1_chr5_+_37637027_37637257	0.956065	FOX{I1,J2}.p2	Y09080|Crmp1|12933|collapsin response mediator protein 1	AB006714|Crmp1|12933|collapsin response mediator protein 1	NM_007765|Crmp1|12933|collapsin response mediator protein 1	BC031738|Crmp1|12933|collapsin response mediator protein 1	U72875|Crmp1|12933|collapsin response mediator protein 1
mm9_v1_chr17_+_46434369_46434431	0.949237	FOX{I1,J2}.p2	NM_207666|Dlk2|106565|delta-like 2 homolog (Drosophila)	BC118057|Dlk2|106565|delta-like 2 homolog (Drosophila)	BC122518|Dlk2|106565|delta-like 2 homolog (Drosophila)
mm9_v1_chr10_-_80693488_80693567	0.947236	FOX{I1,J2}.p2	AY349150|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	BC048903|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK038990|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	NM_178662|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK039411|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK028298|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK038483|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK162959|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)	AK086723|Atcay|16467|ataxia, cerebellar, Cayman type homolog (human)
mm9_v1_chr11_-_103815334_103815354	0.945737	FOX{I1,J2}.p2	AK042341|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK049281|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK051430|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK141986|Nsf|18195|N-ethylmaleimide sensitive fusion protein	AK153905|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr10_-_82996799_82996825	0.934401	FOX{I1,J2}.p2	AK046198|Aldh1l2|216188|aldehyde dehydrogenase 1 family, member L2	BC034531|Aldh1l2|216188|aldehyde dehydrogenase 1 family, member L2	AK086413|Aldh1l2|216188|aldehyde dehydrogenase 1 family, member L2
mm9_v1_chr10_-_3557441_3557947	0.927815	FOX{I1,J2}.p2	AY397681|Oprm1|18390|opioid receptor, mu 1	AF062754|Oprm1|18390|opioid receptor, mu 1	DQ363376|Oprm1|18390|opioid receptor, mu 1	DQ363377|Oprm1|18390|opioid receptor, mu 1	AB441734|Oprm1|18390|opioid receptor, mu 1	AB441735|Oprm1|18390|opioid receptor, mu 1	AB441736|Oprm1|18390|opioid receptor, mu 1	AB441737|Oprm1|18390|opioid receptor, mu 1	AB441738|Oprm1|18390|opioid receptor, mu 1	AB441739|Oprm1|18390|opioid receptor, mu 1	AB441740|Oprm1|18390|opioid receptor, mu 1	AB441741|Oprm1|18390|opioid receptor, mu 1	AB441742|Oprm1|18390|opioid receptor, mu 1	AB441743|Oprm1|18390|opioid receptor, mu 1	AK038389|Oprm1|18390|opioid receptor, mu 1	AF062753|Oprm1|18390|opioid receptor, mu 1	AF074973|Oprm1|18390|opioid receptor, mu 1	AF074974|Oprm1|18390|opioid receptor, mu 1	AF167565|Oprm1|18390|opioid receptor, mu 1	AF167566|Oprm1|18390|opioid receptor, mu 1	AF167567|Oprm1|18390|opioid receptor, mu 1	AF167568|Oprm1|18390|opioid receptor, mu 1	AF346812|Oprm1|18390|opioid receptor, mu 1	AF346813|Oprm1|18390|opioid receptor, mu 1	AF346814|Oprm1|18390|opioid receptor, mu 1	AY036621|Oprm1|18390|opioid receptor, mu 1	AY160190|Oprm1|18390|opioid receptor, mu 1	AY923181|Oprm1|18390|opioid receptor, mu 1	AY923183|Oprm1|18390|opioid receptor, mu 1	BC119545|Oprm1|18390|opioid receptor, mu 1	DQ868787|Oprm1|18390|opioid receptor, mu 1	DQ868788|Oprm1|18390|opioid receptor, mu 1	EF105311|Oprm1|18390|opioid receptor, mu 1	EF105312|Oprm1|18390|opioid receptor, mu 1	EF105313|Oprm1|18390|opioid receptor, mu 1	EF105314|Oprm1|18390|opioid receptor, mu 1	AY923182|Oprm1|18390|opioid receptor, mu 1	AB047546|Oprm1|18390|opioid receptor, mu 1	U19380|Oprm1|18390|opioid receptor, mu 1	NM_001039652|Oprm1|18390|opioid receptor, mu 1	U26915|Oprm1|18390|opioid receptor, mu 1
mm9_v1_chr11_-_100334076_100334121	0.92056	FOX{I1,J2}.p2	BC111873|Klhl11|217194|kelch-like 11 (Drosophila)	AK029101|Klhl11|217194|kelch-like 11 (Drosophila)	NM_172565|Klhl11|217194|kelch-like 11 (Drosophila)
mm9_v1_chrX_+_70437517_70437560	0.914529	FOX{I1,J2}.p2	NM_001081643|Xlr3b|574437|X-linked lymphocyte-regulated 3B	BC057003|Xlr3b|574437|X-linked lymphocyte-regulated 3B	AK146398|Xlr3b|574437|X-linked lymphocyte-regulated 3B	BC038862|Xlr3b|574437|X-linked lymphocyte-regulated 3B	BC064787|Xlr3b|574437|X-linked lymphocyte-regulated 3B
mm9_v1_chr12_-_86311718_86311851	0.912347	FOX{I1,J2}.p2	BC057351|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	BC079590|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	AK147878|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	AK154529|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	AK147491|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene	NM_178065|1110018G07Rik|68497|RIKEN cDNA 1110018G07 gene
mm9_v1_chr12_+_72410755_72411027	0.909146	FOX{I1,J2}.p2	NM_001190466|Dact1|59036|dapper homolog 1, antagonist of beta-catenin (xenopus)	NM_021532|Dact1|59036|dapper homolog 1, antagonist of beta-catenin (xenopus)	BC145833|Dact1|59036|dapper homolog 1, antagonist of beta-catenin (xenopus)	AF488775|Dact1|59036|dapper homolog 1, antagonist of beta-catenin (xenopus)	AY208970|Dact1|59036|dapper homolog 1, antagonist of beta-catenin (xenopus)
mm9_v1_chr12_+_33832641_33832680	0.90248	FOX{I1,J2}.p2	AK013145|Atxn7l1|380753|ataxin 7-like 1	BC100598|Atxn7l1|380753|ataxin 7-like 1	BC017546|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr5_+_89012547_89012592	0.898511	FOX{I1,J2}.p2	AK018184|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr5_-_99681835_99681949	0.881833	FOX{I1,J2}.p2	AK028756|Rasgef1b|320292|RasGEF domain family, member 1B	BC052726|Rasgef1b|320292|RasGEF domain family, member 1B	AK090085|Rasgef1b|320292|RasGEF domain family, member 1B	AK149812|Rasgef1b|320292|RasGEF domain family, member 1B	AY129963|Rasgef1b|320292|RasGEF domain family, member 1B	BC050858|Rasgef1b|320292|RasGEF domain family, member 1B	NM_145839|Rasgef1b|320292|RasGEF domain family, member 1B	NM_181318|Rasgef1b|320292|RasGEF domain family, member 1B
mm9_v1_chr2_-_66248146_66248185	0.872322	FOX{I1,J2}.p2	
mm9_v1_chr9_+_20447739_20447785	0.863004	FOX{I1,J2}.p2	AK051149|Ubl5|66177|ubiquitin-like 5	NM_025401|Ubl5|66177|ubiquitin-like 5	AK040449|Ubl5|66177|ubiquitin-like 5
mm9_v1_chr6_-_60779848_60779848	0.861187	FOX{I1,J2}.p2	AF179273|Snca|20617|synuclein, alpha	NM_009221|Snca|20617|synuclein, alpha
mm9_v1_chr4_-_115612507_115612530	0.853714	FOX{I1,J2}.p2	BC050912|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AB037698|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AF448118|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	AK141654|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	NM_001025567|Dmbx1|140477|diencephalon/mesencephalon homeobox 1	NM_130865|Dmbx1|140477|diencephalon/mesencephalon homeobox 1
mm9_v1_chr9_+_22215956_22216031	0.851103	FOX{I1,J2}.p2	AK220359|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene	AK021129|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene	AK170604|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene	BC054761|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene	NM_026739|9530077C05Rik|68283|RIKEN cDNA 9530077C05 gene
mm9_v1_chr9_+_79914685_79914721	0.851031	FOX{I1,J2}.p2	AK053904|Senp6|215351|SUMO/sentrin specific peptidase 6	NM_146003|Senp6|215351|SUMO/sentrin specific peptidase 6
mm9_v1_chr5_-_5664180_5664238	0.849685	FOX{I1,J2}.p2	BC054079|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	BC062906|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	AK039388|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	AK140211|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	AK076835|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	AK029545|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	AK039313|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	NM_172447|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene	AK029553|A330021E22Rik|207686|RIKEN cDNA A330021E22 gene
mm9_v1_chr18_+_37828606_37828758	0.847089	FOX{I1,J2}.p2	AB093250|Pcdhga2|93710|protocadherin gamma subfamily A, 2	BC139178|Pcdhga2|93710|protocadherin gamma subfamily A, 2	AY013796|Pcdhga2|93710|protocadherin gamma subfamily A, 2	NM_033585|Pcdhga2|93710|protocadherin gamma subfamily A, 2
mm9_v1_chr6_-_55631039_55631067	0.845208	FOX{I1,J2}.p2	AK144303|Neurod6|11922|neurogenic differentiation 6	BC087831|Neurod6|11922|neurogenic differentiation 6	U29086|Neurod6|11922|neurogenic differentiation 6
mm9_v1_chr2_-_66473008_66473018	0.840376	FOX{I1,J2}.p2	NM_018852|Scn9a|20274|sodium channel, voltage-gated, type IX, alpha	AK141871|Scn9a|20274|sodium channel, voltage-gated, type IX, alpha
mm9_v1_chr1_+_87942437_87942543	0.835598	FOX{I1,J2}.p2	BC137675|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	BC144821|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144992|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene	NM_001144993|2810459M11Rik|72792|RIKEN cDNA 2810459M11 gene
mm9_v1_chr18_-_16966954_16967033	0.835447	FOX{I1,J2}.p2	AK087418|Cdh2|12558|cadherin 2	BC022107|Cdh2|12558|cadherin 2	AK032826|Cdh2|12558|cadherin 2
mm9_v1_chr12_-_88784769_88784966	0.830496	FOX{I1,J2}.p2	BC050856|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC094381|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK012518|Nrp|654309|neural regeneration protein	AK143105|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK042102|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	AK049549|Nrp|654309|neural regeneration protein	AK144828|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	NM_001102565|Alkbh1|211064|alkB, alkylation repair homolog 1 (E. coli)	BC119399|Nrp|654309|neural regeneration protein	BC119401|Nrp|654309|neural regeneration protein	AY753183|Nrp|654309|neural regeneration protein	NM_001013372|Nrp|654309|neural regeneration protein
mm9_v1_chr19_+_45122281_45122364	0.825866	FOX{I1,J2}.p2	AK154274|Sfxn3|94280|sideroflexin 3	AF325262|Sfxn3|94280|sideroflexin 3	AK089985|Sfxn3|94280|sideroflexin 3	AK184595|Sfxn3|94280|sideroflexin 3	AK206211|Sfxn3|94280|sideroflexin 3	AK034514|Sfxn3|94280|sideroflexin 3
mm9_v1_chr10_+_75931622_75931715	0.82353	FOX{I1,J2}.p2	AK122313|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	AJ006590|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	AK051901|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	BC052452|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein	NM_019434|Mcm3ap|54387|minichromosome maintenance deficient 3 (S. cerevisiae) associated protein
mm9_v1_chr18_-_15309939_15309954	0.82321	FOX{I1,J2}.p2	AY899808|Kctd1|106931|potassium channel tetramerisation domain containing 1	NM_134112|Kctd1|106931|potassium channel tetramerisation domain containing 1
mm9_v1_chr2_+_106535757_106535757	0.816658	FOX{I1,J2}.p2	AK012553|Mpped2|77015|metallophosphoesterase domain containing 2	NM_029837|Mpped2|77015|metallophosphoesterase domain containing 2
mm9_v1_chr18_+_37656644_37656807	0.812979	FOX{I1,J2}.p2	AK029163|Pcdhb19|93890|protocadherin beta 19	AK147520|Pcdhb19|93890|protocadherin beta 19	AK160654|Pcdhb19|93890|protocadherin beta 19	NM_053144|Pcdhb19|93890|protocadherin beta 19	AK046363|Pcdhb19|93890|protocadherin beta 19	BC141290|Pcdhb19|93890|protocadherin beta 19	BC141291|Pcdhb19|93890|protocadherin beta 19	AF326312|Pcdhb19|93890|protocadherin beta 19	AY013780|Pcdhb19|93890|protocadherin beta 19
mm9_v1_chr8_+_85689250_85689250	0.807706	FOX{I1,J2}.p2	AK049049|Tbc1d9|71310|TBC1 domain family, member 9	NM_001111304|Tbc1d9|71310|TBC1 domain family, member 9	NM_027758|Tbc1d9|71310|TBC1 domain family, member 9
mm9_v1_chr2_-_26236126_26236172	0.807074	FOX{I1,J2}.p2	BC018169|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	AK077522|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	BC057031|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	AK136996|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	AK052107|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4	NM_172339|Snapc4|227644|small nuclear RNA activating complex, polypeptide 4
mm9_v1_chr7_-_19751441_19751475	0.802962	FOX{I1,J2}.p2	AK050472|Gipr|381853|gastric inhibitory polypeptide receptor	AK146552|Gipr|381853|gastric inhibitory polypeptide receptor	NM_001080815|Gipr|381853|gastric inhibitory polypeptide receptor
mm9_v1_chr1_+_92100572_92100639	0.800789	FOX{I1,J2}.p2	AK031100|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	NM_007722|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	AF000236|Cxcr7|12778|chemokine (C-X-C motif) receptor 7	BC015254|Cxcr7|12778|chemokine (C-X-C motif) receptor 7
mm9_v1_chr7_+_29062724_29062783	0.798204	FOX{I1,J2}.p2	NM_001177427|Eid2b|434156|EP300 interacting inhibitor of differentiation 2B	AK044722|Eid2b|434156|EP300 interacting inhibitor of differentiation 2B
mm9_v1_chr6_+_135148004_135148077	0.79728	FOX{I1,J2}.p2	AK169892|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	NM_028982|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC137674|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC137676|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK018428|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK155128|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	AK039401|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene	BC079676|8430419L09Rik|74525|RIKEN cDNA 8430419L09 gene
mm9_v1_chr11_+_48613820_48613894	0.795128	FOX{I1,J2}.p2	AK168349|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166868|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166786|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166800|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK017772|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK051226|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK159797|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK161234|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166945|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK168086|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK168096|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK168196|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK169612|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	NM_008143|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK160739|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	D29802|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	X75313|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK002493|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK166417|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	BC046760|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	BC020322|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1	AK160528|Gnb2l1|14694|guanine nucleotide binding protein (G protein), beta polypeptide 2 like 1
mm9_v1_chr7_-_31411149_31411184	0.792162	FOX{I1,J2}.p2	AK007996|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1	NM_025628|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1
mm9_v1_chr6_-_42643001_42643085	0.784433	FOX{I1,J2}.p2	AK076242|Fam115a|77574|family with sequence similarity 115, member A	AK013025|Fam115a|77574|family with sequence similarity 115, member A	AK148593|Fam115a|77574|family with sequence similarity 115, member A	AK053509|Fam115a|77574|family with sequence similarity 115, member A	NM_029930|Fam115a|77574|family with sequence similarity 115, member A	BC031718|Fam115a|77574|family with sequence similarity 115, member A
mm9_v1_chr12_-_32398730_32398790	0.782308	FOX{I1,J2}.p2	AK140577|Gpr22|73010|G protein-coupled receptor 22	AK034194|Gpr22|73010|G protein-coupled receptor 22	AK013755|Gpr22|73010|G protein-coupled receptor 22	AK048077|Gpr22|73010|G protein-coupled receptor 22	AK141569|Gpr22|73010|G protein-coupled receptor 22	BC089509|Gpr22|73010|G protein-coupled receptor 22	NM_175191|Gpr22|73010|G protein-coupled receptor 22
mm9_v1_chr7_-_148615247_148615354	0.7801	FOX{I1,J2}.p2	AF243130|Cend1|57754|cell cycle exit and neuronal differentiation 1	AK005092|Cend1|57754|cell cycle exit and neuronal differentiation 1	BC023032|Cend1|57754|cell cycle exit and neuronal differentiation 1	AK079045|Cend1|57754|cell cycle exit and neuronal differentiation 1	NM_021316|Cend1|57754|cell cycle exit and neuronal differentiation 1
mm9_v1_chr11_+_51577152_51577250	0.77864	FOX{I1,J2}.p2	NM_025535|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK002327|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK155429|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	BC082550|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK150906|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	BC085178|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)	AK013559|Sar1b|66397|SAR1 gene homolog B (S. cerevisiae)
mm9_v1_chr7_+_116094153_116094278	0.776193	FOX{I1,J2}.p2	AK158865|BC049265|414075|cDNA sequence BC049265	BC030475|BC049265|414075|cDNA sequence BC049265	BC049265|BC049265|414075|cDNA sequence BC049265
mm9_v1_chr19_+_46227039_46227050	0.761527	FOX{I1,J2}.p2	BC076569|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	NM_178930|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr3_-_146432922_146432972	0.759957	FOX{I1,J2}.p2	AK139419|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr15_+_91991704_91991862	0.752337	FOX{I1,J2}.p2	NM_001159647|Cntn1|12805|contactin 1	BC066864|Cntn1|12805|contactin 1
mm9_v1_chr15_+_76531891_76531971	0.751211	FOX{I1,J2}.p2	AK009269|Mfsd3|69572|major facilitator superfamily domain containing 3	BC085305|Mfsd3|69572|major facilitator superfamily domain containing 3	AK089539|Mfsd3|69572|major facilitator superfamily domain containing 3	NM_027122|Mfsd3|69572|major facilitator superfamily domain containing 3
mm9_v1_chr16_+_96366980_96367038	0.750958	FOX{I1,J2}.p2	AK084688|Wrb|71446|tryptophan rich basic protein	AK172079|Wrb|71446|tryptophan rich basic protein	BC031769|Wrb|71446|tryptophan rich basic protein	NM_207301|Wrb|71446|tryptophan rich basic protein	AK021091|Wrb|71446|tryptophan rich basic protein
mm9_v1_chr2_+_123915670_123915704	0.750484	FOX{I1,J2}.p2	AK122515|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chrX_-_17149313_17149460	0.740931	FOX{I1,J2}.p2	BC012515|Fundc1|72018|FUN14 domain containing 1	AK168868|Fundc1|72018|FUN14 domain containing 1	BC030487|Fundc1|72018|FUN14 domain containing 1	AK005163|Fundc1|72018|FUN14 domain containing 1	NM_028058|Fundc1|72018|FUN14 domain containing 1
mm9_v1_chr4_+_144482979_144483095	0.739152	FOX{I1,J2}.p2	AK032958|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	X95281|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	AK151419|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	NM_011303|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3	BC013540|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chr1_-_72921438_72921462	0.738013	FOX{I1,J2}.p2	BC057447|Igfbp5|16011|insulin-like growth factor binding protein 5	NM_010518|Igfbp5|16011|insulin-like growth factor binding protein 5	AK142108|Igfbp5|16011|insulin-like growth factor binding protein 5
mm9_v1_chr9_-_39411708_39411856	0.735313	FOX{I1,J2}.p2	AK049098|AW551984|244810|expressed sequence AW551984	NM_178737|AW551984|244810|expressed sequence AW551984	BC061211|AW551984|244810|expressed sequence AW551984
mm9_v1_chr17_-_29052264_29052268	0.734886	FOX{I1,J2}.p2	BC117930|4930539E08Rik|207819|RIKEN cDNA 4930539E08 gene	AK033585|4930539E08Rik|207819|RIKEN cDNA 4930539E08 gene	NM_172450|4930539E08Rik|207819|RIKEN cDNA 4930539E08 gene
mm9_v1_chr7_-_20506379_20506493	0.733926	FOX{I1,J2}.p2	AJ563420|Pvr|52118|poliovirus receptor	BC138219|Pvr|52118|poliovirus receptor	BC138220|Pvr|52118|poliovirus receptor	BC032283|Pvr|52118|poliovirus receptor	AB195430|Pvr|52118|poliovirus receptor	BC013673|Pvr|52118|poliovirus receptor	AK078344|Pvr|52118|poliovirus receptor	AK014446|Pvr|52118|poliovirus receptor	AK038747|Pvr|52118|poliovirus receptor	AK080753|Pvr|52118|poliovirus receptor	AK165873|Pvr|52118|poliovirus receptor	NM_027514|Pvr|52118|poliovirus receptor
mm9_v1_chr13_+_14722530_14722557	0.722748	FOX{I1,J2}.p2	AK030506|AW209491|105351|expressed sequence AW209491	AK050507|AW209491|105351|expressed sequence AW209491	AK077649|AW209491|105351|expressed sequence AW209491
mm9_v1_chr11_+_82988687_82988701	0.72123	FOX{I1,J2}.p2	BC044865|Slfn4|20558|schlafen 4	NM_011410|Slfn4|20558|schlafen 4	AK137559|Slfn4|20558|schlafen 4	AK137689|Slfn4|20558|schlafen 4
mm9_v1_chr9_+_50583388_50583453	0.719419	FOX{I1,J2}.p2	AK086674|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	AK050335|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	AK149592|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	AK054293|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	BC021791|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)	NM_133981|Alg9|102580|asparagine-linked glycosylation 9 homolog (yeast, alpha 1,2 mannosyltransferase)
mm9_v1_chr8_+_96334452_96334737	0.718554	FOX{I1,J2}.p2	AK160434|Gnao1|14681|guanine nucleotide binding protein, alpha O	AK035907|Gnao1|14681|guanine nucleotide binding protein, alpha O	NM_001113384|Gnao1|14681|guanine nucleotide binding protein, alpha O	NM_010308|Gnao1|14681|guanine nucleotide binding protein, alpha O
mm9_v1_chr10_-_75931585_75931614	0.714601	FOX{I1,J2}.p2	AK037727|Ybey|216119|ybeY metallopeptidase	AK051909|Ybey|216119|ybeY metallopeptidase	AK136543|Ybey|216119|ybeY metallopeptidase
mm9_v1_chr7_+_97535490_97535508	0.713131	FOX{I1,J2}.p2	AK051653|Sytl2|83671|synaptotagmin-like 2	NM_001040087|Sytl2|83671|synaptotagmin-like 2	NM_001040088|Sytl2|83671|synaptotagmin-like 2	AK162921|Sytl2|83671|synaptotagmin-like 2	AK027924|Sytl2|83671|synaptotagmin-like 2
mm9_v1_chr17_-_90855291_90855342	0.710749	FOX{I1,J2}.p2	
mm9_v1_chr9_-_53823107_53823121	0.707669	FOX{I1,J2}.p2	AK132239|Elmod1|270162|ELMO domain containing 1	NM_177769|Elmod1|270162|ELMO domain containing 1
mm9_v1_chr6_-_58974400_58974495	0.706847	FOX{I1,J2}.p2	BC005554|Fam13a|58909|family with sequence similarity 13, member A	BC060978|Fam13a|58909|family with sequence similarity 13, member A	AK052421|Fam13a|58909|family with sequence similarity 13, member A	BC054053|Fam13a|58909|family with sequence similarity 13, member A	AJ510136|Fam13a|58909|family with sequence similarity 13, member A	AK054311|Fam13a|58909|family with sequence similarity 13, member A	BC080861|Fam13a|58909|family with sequence similarity 13, member A	NM_153574|Fam13a|58909|family with sequence similarity 13, member A
mm9_v1_chr3_-_122322556_122322614	0.704896	FOX{I1,J2}.p2	AK151930|Fnbp1l|214459|formin binding protein 1-like	AK152002|Fnbp1l|214459|formin binding protein 1-like	NM_001114665|Fnbp1l|214459|formin binding protein 1-like	NM_153118|Fnbp1l|214459|formin binding protein 1-like
mm9_v1_chr9_-_52484889_52484906	0.704523	FOX{I1,J2}.p2	AK053489|AI593442|330941|expressed sequence AI593442
mm9_v1_chrX_+_34335651_34335798	0.701621	FOX{I1,J2}.p2	BC004570|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	BC086756|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	U10404|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK188826|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5	AK195999|Slc25a5|11740|solute carrier family 25 (mitochondrial carrier, adenine nucleotide translocator), member 5
mm9_v1_chr3_-_86352170_86352368	0.69672	FOX{I1,J2}.p2	BC046628|Mab21l2|23937|mab-21-like 2 (C. elegans)	AK053645|Mab21l2|23937|mab-21-like 2 (C. elegans)	NM_011839|Mab21l2|23937|mab-21-like 2 (C. elegans)	BC058730|Mab21l2|23937|mab-21-like 2 (C. elegans)	AK144373|Mab21l2|23937|mab-21-like 2 (C. elegans)
mm9_v1_chr1_-_140739020_140739033	0.693907	FOX{I1,J2}.p2	AK031478|Lhx9|16876|LIM homeobox protein 9	NM_001025565|Lhx9|16876|LIM homeobox protein 9	NM_001042577|Lhx9|16876|LIM homeobox protein 9	BC072623|Lhx9|16876|LIM homeobox protein 9
mm9_v1_chr6_+_4853319_4853431	0.691238	FOX{I1,J2}.p2	AB091828|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	NM_181595|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	AK158559|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A	BC053748|Ppp1r9a|243725|protein phosphatase 1, regulatory (inhibitor) subunit 9A
mm9_v1_chr12_-_4776037_4776072	0.687414	FOX{I1,J2}.p2	AK050447|A830093I24Rik|207921|RIKEN cDNA A830093I24 gene	AK044133|A830093I24Rik|207921|RIKEN cDNA A830093I24 gene	NM_175431|A830093I24Rik|207921|RIKEN cDNA A830093I24 gene
mm9_v1_chr8_+_72332573_72332679	0.681868	FOX{I1,J2}.p2	AK043883|Gmip|78816|Gem-interacting protein	BC057037|Gmip|78816|Gem-interacting protein	NM_198101|Gmip|78816|Gem-interacting protein	AK082337|Gmip|78816|Gem-interacting protein	AK172438|Gmip|78816|Gem-interacting protein	BC060628|Gmip|78816|Gem-interacting protein	AK137177|Gmip|78816|Gem-interacting protein	AK052221|Gmip|78816|Gem-interacting protein
mm9_v1_chr10_+_14480024_14480094	0.681585	FOX{I1,J2}.p2	BC144884|Nmbr|18101|neuromedin B receptor	BC144885|Nmbr|18101|neuromedin B receptor	BC119237|Nmbr|18101|neuromedin B receptor	NM_008703|Nmbr|18101|neuromedin B receptor
mm9_v1_chr11_-_101087738_101087767	0.677659	FOX{I1,J2}.p2	AK045374|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK138942|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	U60453|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK164192|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	AK140694|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)	NM_007970|Ezh1|14055|enhancer of zeste homolog 1 (Drosophila)
mm9_v1_chr17_+_37139426_37139615	0.67633	FOX{I1,J2}.p2	NM_001168501|Zfp57|22715|zinc finger protein 57	NM_001013745|Zfp57|22715|zinc finger protein 57	AK054083|Zfp57|22715|zinc finger protein 57	AK136241|Zfp57|22715|zinc finger protein 57	AK135881|Zfp57|22715|zinc finger protein 57	AK145368|Zfp57|22715|zinc finger protein 57
mm9_v1_chr13_-_38750866_38750905	0.675242	FOX{I1,J2}.p2	AK009889|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1	AK003335|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1	AK160723|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1	BC048466|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1	NM_025380|Eef1e1|66143|eukaryotic translation elongation factor 1 epsilon 1
mm9_v1_chr11_+_8948594_8948715	0.672648	FOX{I1,J2}.p2	NM_001037928|Gm11992|626870|predicted gene 11992	AK154909|Gm11992|626870|predicted gene 11992	AK160996|Gm11992|626870|predicted gene 11992	BC147253|Gm11992|626870|predicted gene 11992	BC147254|Gm11992|626870|predicted gene 11992
mm9_v1_chrX_-_132738383_132738456	0.670298	FOX{I1,J2}.p2	AK032140|Tceal5|331532|transcription elongation factor A (SII)-like 5	NM_177919|Tceal5|331532|transcription elongation factor A (SII)-like 5	BC100415|Tceal5|331532|transcription elongation factor A (SII)-like 5
mm9_v1_chr3_-_126928844_126928867	0.669824	FOX{I1,J2}.p2	AK044093|Ank2|109676|ankyrin 2, brain
mm9_v1_chr7_-_117758413_117758468	0.664859	FOX{I1,J2}.p2	BC048706|Sbf2|319934|SET binding factor 2	AK080963|Sbf2|319934|SET binding factor 2	AK087396|Sbf2|319934|SET binding factor 2	AK080952|Sbf2|319934|SET binding factor 2	NM_177324|Sbf2|319934|SET binding factor 2	AK046622|Sbf2|319934|SET binding factor 2
mm9_v1_chr6_-_142456402_142456478	0.662102	FOX{I1,J2}.p2	X51905|Ldhb|16832|lactate dehydrogenase B	AK002257|Ldhb|16832|lactate dehydrogenase B	BC087888|Ldhb|16832|lactate dehydrogenase B	BC046755|Ldhb|16832|lactate dehydrogenase B	NM_008492|Ldhb|16832|lactate dehydrogenase B	AK131637|Ldhb|16832|lactate dehydrogenase B	AK019391|Ldhb|16832|lactate dehydrogenase B
mm9_v1_chr2_+_59322709_59322728	0.657135	FOX{I1,J2}.p2	NM_029723|Dapl1|76747|death associated protein-like 1	AK009567|Dapl1|76747|death associated protein-like 1	BC116916|Dapl1|76747|death associated protein-like 1	BC116920|Dapl1|76747|death associated protein-like 1	BC063096|Dapl1|76747|death associated protein-like 1	BC052745|Dapl1|76747|death associated protein-like 1
mm9_v1_chr16_-_75766992_75767062	0.656116	FOX{I1,J2}.p2	BC039701|Hspa13|110920|heat shock protein 70 family, member 13	AK167839|Hspa13|110920|heat shock protein 70 family, member 13	BC094508|Hspa13|110920|heat shock protein 70 family, member 13	BC085181|Hspa13|110920|heat shock protein 70 family, member 13	AK049011|Hspa13|110920|heat shock protein 70 family, member 13	AK021006|Hspa13|110920|heat shock protein 70 family, member 13	AK030553|Hspa13|110920|heat shock protein 70 family, member 13	AK034643|Hspa13|110920|heat shock protein 70 family, member 13	NM_030201|Hspa13|110920|heat shock protein 70 family, member 13
mm9_v1_chr9_+_3335139_3335230	0.653374	FOX{I1,J2}.p2	AK160783|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	BC050863|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	NM_026303|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)
mm9_v1_chr6_-_113327472_113327595	0.652971	FOX{I1,J2}.p2	AK180989|Tada3|101206|transcriptional adaptor 3	BC022707|Tada3|101206|transcriptional adaptor 3	BC023879|Tada3|101206|transcriptional adaptor 3	BC026630|Tada3|101206|transcriptional adaptor 3	NM_133932|Tada3|101206|transcriptional adaptor 3
mm9_v1_chr7_-_117758395_117758412	0.648418	FOX{I1,J2}.p2	AK173257|Sbf2|319934|SET binding factor 2	AK048952|Sbf2|319934|SET binding factor 2	BC067204|Sbf2|319934|SET binding factor 2
mm9_v1_chr16_-_20426357_20426468	0.647974	FOX{I1,J2}.p2	BC042581|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	AB019003|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC090629|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	BC061132|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_013790|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5	NM_176839|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm9_v1_chr11_+_72609717_72609729	0.647709	FOX{I1,J2}.p2	AK158924|Zzef1|195018|zinc finger, ZZ-type with EF hand domain 1	NM_001045536|Zzef1|195018|zinc finger, ZZ-type with EF hand domain 1
mm9_v1_chr9_+_58100961_58101075	0.647289	FOX{I1,J2}.p2	NM_026942|Stoml1|69106|stomatin-like 1	AK045820|Stoml1|69106|stomatin-like 1	BC017536|Stoml1|69106|stomatin-like 1	BC037074|Stoml1|69106|stomatin-like 1	AK148324|Stoml1|69106|stomatin-like 1
mm9_v1_chr18_-_43058544_43058664	0.647287	FOX{I1,J2}.p2	AK039592|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	BC088979|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	NM_027531|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform	AK018119|Ppp2r2b|72930|protein phosphatase 2 (formerly 2A), regulatory subunit B (PR 52), beta isoform
mm9_v1_chr10_+_18189773_18189786	0.646941	FOX{I1,J2}.p2	BC030842|Nhsl1|215819|NHS-like 1	NM_001163592|Nhsl1|215819|NHS-like 1
mm9_v1_chr18_+_37112301_37112419	0.644117	FOX{I1,J2}.p2	AK149282|Pcdha4|12936|protocadherin alpha 4	AK048980|Pcdha4|12936|protocadherin alpha 4	BC060211|Pcdha4|12936|protocadherin alpha 4	D86916|Pcdha4|12936|protocadherin alpha 4	NM_007766|Pcdha4|12936|protocadherin alpha 4	AF464180|Pcdha4-g|100384868|protocadherin alpha 4-gamma	NM_001174154|Pcdha4-g|100384868|protocadherin alpha 4-gamma	AY013762|Pcdha4|12936|protocadherin alpha 4
mm9_v1_chr15_+_20378816_20378944	0.64339	FOX{I1,J2}.p2	
mm9_v1_chr6_-_143048295_143048370	0.642273	FOX{I1,J2}.p2	AK172966|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	BC053913|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	AK141590|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene
mm9_v1_chr2_-_121299743_121299792	0.642131	FOX{I1,J2}.p2	AK011317|Mfap1b|100034361|microfibrillar-associated protein 1B	AK018514|Mfap1b|100034361|microfibrillar-associated protein 1B	NM_001081975|Mfap1b|100034361|microfibrillar-associated protein 1B	AK169029|Mfap1b|100034361|microfibrillar-associated protein 1B	AK088946|Mfap1b|100034361|microfibrillar-associated protein 1B
mm9_v1_chr8_-_55809700_55809720	0.634682	FOX{I1,J2}.p2	AK013889|Wdr17|244484|WD repeat domain 17	AK020995|Wdr17|244484|WD repeat domain 17	AK044241|Wdr17|244484|WD repeat domain 17	NM_001172152|Wdr17|244484|WD repeat domain 17
mm9_v1_chr1_+_19198994_19199078	0.634196	FOX{I1,J2}.p2	AK017373|Tcfap2b|21419|transcription factor AP-2 beta	NM_009334|Tcfap2b|21419|transcription factor AP-2 beta	AK005128|Tcfap2b|21419|transcription factor AP-2 beta	AK028906|Tcfap2b|21419|transcription factor AP-2 beta	X78197|Tcfap2b|21419|transcription factor AP-2 beta
mm9_v1_chr12_+_110783786_110783839	0.632018	FOX{I1,J2}.p2	BC048191|Meg3|17263|maternally expressed 3
mm9_v1_chr12_+_75065510_75065528	0.630003	FOX{I1,J2}.p2	AK152833|Snapc1|75627|small nuclear RNA activating complex, polypeptide 1	AK138261|Snapc1|75627|small nuclear RNA activating complex, polypeptide 1	NM_178392|Snapc1|75627|small nuclear RNA activating complex, polypeptide 1
mm9_v1_chr14_+_14286471_14286627	0.629147	FOX{I1,J2}.p2	NM_001163032|Synpr|72003|synaptoporin	AK033999|Synpr|72003|synaptoporin	AK032442|Synpr|72003|synaptoporin	AK045705|Synpr|72003|synaptoporin	AK049661|Synpr|72003|synaptoporin
mm9_v1_chr1_+_37356745_37356791	0.628464	FOX{I1,J2}.p2	AK089671|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	AK149414|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I
mm9_v1_chr19_-_5349326_5349384	0.626493	FOX{I1,J2}.p2	BC027680|Cst6|73720|cystatin E/M	BC061036|Cst6|73720|cystatin E/M	AK003744|Cst6|73720|cystatin E/M
mm9_v1_chr6_-_71773747_71773805	0.623987	FOX{I1,J2}.p2	AK039187|Mrpl35|66223|mitochondrial ribosomal protein L35	AK010369|Mrpl35|66223|mitochondrial ribosomal protein L35	AK012807|Mrpl35|66223|mitochondrial ribosomal protein L35	AK004385|Mrpl35|66223|mitochondrial ribosomal protein L35	AK010223|Mrpl35|66223|mitochondrial ribosomal protein L35	BC028750|Mrpl35|66223|mitochondrial ribosomal protein L35	NM_025430|Mrpl35|66223|mitochondrial ribosomal protein L35
mm9_v1_chr16_+_36828464_36828529	0.620569	FOX{I1,J2}.p2	NM_177128|Iqcb1|320299|IQ calmodulin-binding motif containing 1	BC029084|Iqcb1|320299|IQ calmodulin-binding motif containing 1	AK078554|Iqcb1|320299|IQ calmodulin-binding motif containing 1	AK165220|Iqcb1|320299|IQ calmodulin-binding motif containing 1
mm9_v1_chr10_+_127936302_127936454	0.619212	FOX{I1,J2}.p2	AK040027|A430046D13Rik|654440|Riken cDNA A430046D13 gene
mm9_v1_chr13_-_6647924_6648034	0.615661	FOX{I1,J2}.p2	CT010268|Pfkp|56421|phosphofructokinase, platelet	AY779275|Pfkp|56421|phosphofructokinase, platelet	AY779276|Pfkp|56421|phosphofructokinase, platelet	BC006926|Pfkp|56421|phosphofructokinase, platelet	AK165422|Pfkp|56421|phosphofructokinase, platelet	AK165425|Pfkp|56421|phosphofructokinase, platelet	Y19008|Pfkp|56421|phosphofructokinase, platelet	AK049841|Pfkp|56421|phosphofructokinase, platelet	AK170624|Pfkp|56421|phosphofructokinase, platelet	NM_019703|Pfkp|56421|phosphofructokinase, platelet	AK004790|Pfkp|56421|phosphofructokinase, platelet	AK020367|Pfkp|56421|phosphofructokinase, platelet	AK054193|Pfkp|56421|phosphofructokinase, platelet	AK076803|Pfkp|56421|phosphofructokinase, platelet	AK078254|Pfkp|56421|phosphofructokinase, platelet	AK098162|Pfkp|56421|phosphofructokinase, platelet	AK152670|Pfkp|56421|phosphofructokinase, platelet	AK154125|Pfkp|56421|phosphofructokinase, platelet	AK171062|Pfkp|56421|phosphofructokinase, platelet	AF123533|Pfkp|56421|phosphofructokinase, platelet
mm9_v1_chr2_+_152495244_152495317	0.615269	FOX{I1,J2}.p2	AK051151|H13|14950|histocompatibility 13	AK050664|H13|14950|histocompatibility 13	AK171790|H13|14950|histocompatibility 13	AF515662|H13|14950|histocompatibility 13
mm9_v1_chr2_+_71049762_71049900	0.614359	FOX{I1,J2}.p2	NM_001198872|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198873|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198874|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198875|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	NM_001198876|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK019441|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK141837|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK150173|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK164322|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	AK164437|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992208|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992209|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2	GU992210|Dync1i2|13427|dynein cytoplasmic 1 intermediate chain 2
mm9_v1_chr17_-_24769539_24769566	0.613528	FOX{I1,J2}.p2	AK147487|Tsc2|22084|tuberous sclerosis 2	AK171007|Tsc2|22084|tuberous sclerosis 2	U39818|Tsc2|22084|tuberous sclerosis 2	AK147016|Tsc2|22084|tuberous sclerosis 2	BC052449|Tsc2|22084|tuberous sclerosis 2	BC060701|Tsc2|22084|tuberous sclerosis 2	AK190188|Tsc2|22084|tuberous sclerosis 2	AK170589|Tsc2|22084|tuberous sclerosis 2	AK148062|Tsc2|22084|tuberous sclerosis 2
mm9_v1_chr14_-_66211842_66211926	0.612197	FOX{I1,J2}.p2	NM_028811|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	AK012072|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	AK150058|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	BC057453|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)	AK088457|Elp3|74195|elongation protein 3 homolog (S. cerevisiae)
mm9_v1_chr2_-_38080023_38080025	0.611976	FOX{I1,J2}.p2	AK033323|8030493G06Rik|320880|RIKEN cDNA 8030493G06 gene
mm9_v1_chr13_+_113450958_113450993	0.605775	FOX{I1,J2}.p2	AK020109|Slc38a9|268706|solute carrier family 38, member 9	BC052361|Slc38a9|268706|solute carrier family 38, member 9	NM_178746|Slc38a9|268706|solute carrier family 38, member 9	AK044735|Slc38a9|268706|solute carrier family 38, member 9	AK043402|Slc38a9|268706|solute carrier family 38, member 9	AK034958|Slc38a9|268706|solute carrier family 38, member 9	AK039821|Slc38a9|268706|solute carrier family 38, member 9
mm9_v1_chr19_-_42160732_42160861	0.604156	FOX{I1,J2}.p2	AK180979|Morn4|226123|MORN repeat containing 4	AK214121|Morn4|226123|MORN repeat containing 4	BC023055|Morn4|226123|MORN repeat containing 4	AK159230|Morn4|226123|MORN repeat containing 4	AK154147|Morn4|226123|MORN repeat containing 4	NM_198108|Morn4|226123|MORN repeat containing 4
mm9_v1_chr4_+_102242664_102242699	0.603075	FOX{I1,J2}.p2	NM_001177980|Pde4b|18578|phosphodiesterase 4B, cAMP specific	BC023751|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr12_+_30213224_30213265	0.598554	FOX{I1,J2}.p2	AK012660|Myt1l|17933|myelin transcription factor 1-like	AK139366|Myt1l|17933|myelin transcription factor 1-like	NM_001093775|Myt1l|17933|myelin transcription factor 1-like	NM_001093778|Myt1l|17933|myelin transcription factor 1-like	NM_008666|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr6_-_56873688_56873808	0.595934	FOX{I1,J2}.p2	AK208033|Nt5c3|107569|5'-nucleotidase, cytosolic III
mm9_v1_chr7_+_19791687_19791691	0.593409	FOX{I1,J2}.p2	AK215580|Eml2|72205|echinoderm microtubule associated protein like 2
mm9_v1_chr19_-_47125334_47125422	0.589009	FOX{I1,J2}.p2	BC016195|Pcgf6|71041|polycomb group ring finger 6	NM_027654|Pcgf6|71041|polycomb group ring finger 6	AK016709|Pcgf6|71041|polycomb group ring finger 6	AB047007|Pcgf6|71041|polycomb group ring finger 6	BC089460|Pcgf6|71041|polycomb group ring finger 6	AK132448|Pcgf6|71041|polycomb group ring finger 6	AK155067|Pcgf6|71041|polycomb group ring finger 6
mm9_v1_chr2_+_163428073_163428114	0.588586	FOX{I1,J2}.p2	AK043791|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK052794|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK018052|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK156641|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK081680|Ttpal|76080|tocopherol (alpha) transfer protein-like	BC052389|Ttpal|76080|tocopherol (alpha) transfer protein-like	AK033600|Ttpal|76080|tocopherol (alpha) transfer protein-like
mm9_v1_chr16_+_56075506_56075529	0.587229	FOX{I1,J2}.p2	AK040314|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003971|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003972|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_001003973|Senp7|66315|SUMO1/sentrin specific peptidase 7	NM_025483|Senp7|66315|SUMO1/sentrin specific peptidase 7
mm9_v1_chr11_-_68825972_68825998	0.580422	FOX{I1,J2}.p2	
mm9_v1_chr12_+_38607291_38607482	0.574865	FOX{I1,J2}.p2	AK139408|Dgkb|217480|diacylglycerol kinase, beta	NM_178681|Dgkb|217480|diacylglycerol kinase, beta	AK083222|Dgkb|217480|diacylglycerol kinase, beta	AK047682|Dgkb|217480|diacylglycerol kinase, beta	AK044516|Dgkb|217480|diacylglycerol kinase, beta
mm9_v1_chr18_+_37925619_37925770	0.574743	FOX{I1,J2}.p2	BC054528|Pcdhga12|93724|protocadherin gamma subfamily A, 12	U88550|Pcdhga12|93724|protocadherin gamma subfamily A, 12	AY013795|Pcdhga12|93724|protocadherin gamma subfamily A, 12
mm9_v1_chr7_-_25084567_25084655	0.574369	FOX{I1,J2}.p2	NM_009561|Zfp61|22719|zinc finger protein 61	BC006618|Zfp61|22719|zinc finger protein 61
mm9_v1_chr4_+_98213324_98213424	0.572183	FOX{I1,J2}.p2	NM_001005787|Inadl|12695|InaD-like (Drosophila)	NM_007704|Inadl|12695|InaD-like (Drosophila)	AF060539|Inadl|12695|InaD-like (Drosophila)
mm9_v1_chr19_-_40588297_40588344	0.57083	FOX{I1,J2}.p2	NM_009166|Sorbs1|20411|sorbin and SH3 domain containing 1
mm9_v1_chr3_-_87689483_87689550	0.563839	FOX{I1,J2}.p2	BC052072|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	NM_033573|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC082784|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AF273750|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	AK078394|Prcc|94315|papillary renal cell carcinoma (translocation-associated)	BC027831|Prcc|94315|papillary renal cell carcinoma (translocation-associated)
mm9_v1_chr7_+_26404382_26404511	0.563836	FOX{I1,J2}.p2	AK021146|Atp5sl|66349|ATP5S-like	AK009150|Atp5sl|66349|ATP5S-like	AK002370|Atp5sl|66349|ATP5S-like	AK039669|Atp5sl|66349|ATP5S-like	NM_025504|Atp5sl|66349|ATP5S-like
mm9_v1_chr18_-_61867246_61867319	0.561755	FOX{I1,J2}.p2	BC060677|Pcyox1l|240334|prenylcysteine oxidase 1 like	AK050006|Pcyox1l|240334|prenylcysteine oxidase 1 like	NM_172832|Pcyox1l|240334|prenylcysteine oxidase 1 like
mm9_v1_chr17_+_73267643_73267665	0.560812	FOX{I1,J2}.p2	AK020110|Lbh|77889|limb-bud and heart	NM_029999|Lbh|77889|limb-bud and heart	AF317517|Lbh|77889|limb-bud and heart	BC026827|Lbh|77889|limb-bud and heart	BC052470|Lbh|77889|limb-bud and heart
mm9_v1_chr5_+_138882703_138882746	0.560566	FOX{I1,J2}.p2	NM_028130|Zfp157|72154|zinc finger protein 157	AK042470|Zfp157|72154|zinc finger protein 157	BC059261|Zfp157|72154|zinc finger protein 157	AK083851|Zfp157|72154|zinc finger protein 157	BC049676|Zfp157|72154|zinc finger protein 157	AK028290|Zfp157|72154|zinc finger protein 157
mm9_v1_chr9_-_76171352_76171416	0.559483	FOX{I1,J2}.p2	AY336084|Hcrtr2|387285|hypocretin (orexin) receptor 2	AY336085|Hcrtr2|387285|hypocretin (orexin) receptor 2	BC140957|Hcrtr2|387285|hypocretin (orexin) receptor 2	AK038551|Hcrtr2|387285|hypocretin (orexin) receptor 2	AK048781|Hcrtr2|387285|hypocretin (orexin) receptor 2	NM_198962|Hcrtr2|387285|hypocretin (orexin) receptor 2	AK079572|Hcrtr2|387285|hypocretin (orexin) receptor 2
mm9_v1_chr2_+_71291369_71291427	0.55758	FOX{I1,J2}.p2	AK010067|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	NM_025633|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	AK005241|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)	BC060739|Metap1d|66559|methionyl aminopeptidase type 1D (mitochondrial)
mm9_v1_chr13_+_59234737_59234835	0.555555	FOX{I1,J2}.p2	AK021108|Ntrk2|18212|neurotrophic tyrosine kinase, receptor, type 2
mm9_v1_chr14_-_109313298_109313300	0.554559	FOX{I1,J2}.p2	AK144290|Slitrk1|76965|SLIT and NTRK-like family, member 1
mm9_v1_chr4_+_126354857_126354998	0.553115	FOX{I1,J2}.p2	NM_011970|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AK078487|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AK164463|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	BC008265|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2	AF060090|Psmb2|26445|proteasome (prosome, macropain) subunit, beta type 2
mm9_v1_chr16_-_28753276_28753293	0.548129	FOX{I1,J2}.p2	BC030485|Fgf12|14167|fibroblast growth factor 12	AF020739|Fgf12|14167|fibroblast growth factor 12	NM_010199|Fgf12|14167|fibroblast growth factor 12
mm9_v1_chr2_-_120178819_120178881	0.54788	FOX{I1,J2}.p2	BC007479|Vps39|269338|vacuolar protein sorting 39 (yeast)	AF281050|Vps39|269338|vacuolar protein sorting 39 (yeast)	AF281051|Vps39|269338|vacuolar protein sorting 39 (yeast)	AB028844|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK141424|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK038824|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK042253|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK154103|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK170831|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK171008|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK159889|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK160109|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK084743|Vps39|269338|vacuolar protein sorting 39 (yeast)	NM_147153|Vps39|269338|vacuolar protein sorting 39 (yeast)	NM_178851|Vps39|269338|vacuolar protein sorting 39 (yeast)	AK140041|Vps39|269338|vacuolar protein sorting 39 (yeast)
mm9_v1_chr4_+_134479542_134479573	0.546106	FOX{I1,J2}.p2	BC002142|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC045256|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC051556|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC032060|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC043057|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AB041555|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK150665|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	AK152736|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC054728|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr3_-_52821116_52821157	0.545564	FOX{I1,J2}.p2	AB093286|Cog6|67542|component of oligomeric golgi complex 6	AK048986|Cog6|67542|component of oligomeric golgi complex 6	AK153320|Cog6|67542|component of oligomeric golgi complex 6	AK031149|Cog6|67542|component of oligomeric golgi complex 6	AK045223|Cog6|67542|component of oligomeric golgi complex 6	NM_026225|Cog6|67542|component of oligomeric golgi complex 6	AK016663|Cog6|67542|component of oligomeric golgi complex 6
mm9_v1_chr9_-_118059275_118059324	0.542171	FOX{I1,J2}.p2	AK008567|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)	BC048547|Cmc1|67899|COX assembly mitochondrial protein homolog (S. cerevisiae)
mm9_v1_chr10_-_26095736_26095813	0.54011	FOX{I1,J2}.p2	BC082309|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)	AK031398|L3mbtl3|237339|l(3)mbt-like 3 (Drosophila)
mm9_v1_chr11_+_75161934_75162104	0.539688	FOX{I1,J2}.p2	NM_001102611|Smyd4|319822|SET and MYND domain containing 4	AK166057|Smyd4|319822|SET and MYND domain containing 4	AK089959|Smyd4|319822|SET and MYND domain containing 4	AK141484|Smyd4|319822|SET and MYND domain containing 4	BC095952|Smyd4|319822|SET and MYND domain containing 4	BC049810|Smyd4|319822|SET and MYND domain containing 4	AK030380|Smyd4|319822|SET and MYND domain containing 4	AK154507|Smyd4|319822|SET and MYND domain containing 4
mm9_v1_chr7_+_19918350_19918477	0.536012	FOX{I1,J2}.p2	
mm9_v1_chr4_+_140542775_140542957	0.535552	FOX{I1,J2}.p2	AK171554|Atp13a2|74772|ATPase type 13A2	NM_001164366|Atp13a2|74772|ATPase type 13A2	NM_029097|Atp13a2|74772|ATPase type 13A2	AK156104|Atp13a2|74772|ATPase type 13A2	BC023746|Atp13a2|74772|ATPase type 13A2	AK171305|Atp13a2|74772|ATPase type 13A2	BC042661|Atp13a2|74772|ATPase type 13A2	BC025028|Atp13a2|74772|ATPase type 13A2	AK191875|Atp13a2|74772|ATPase type 13A2	AK197341|Atp13a2|74772|ATPase type 13A2	AK204523|Atp13a2|74772|ATPase type 13A2
mm9_v1_chr4_+_129190877_129190896	0.535465	FOX{I1,J2}.p2	AK079390|Marcksl1|17357|MARCKS-like 1	AK150261|Marcksl1|17357|MARCKS-like 1	AK152990|Marcksl1|17357|MARCKS-like 1	AK169355|Marcksl1|17357|MARCKS-like 1	X61399|Marcksl1|17357|MARCKS-like 1	BC006757|Marcksl1|17357|MARCKS-like 1
mm9_v1_chr8_+_119983566_119983649	0.535027	FOX{I1,J2}.p2	AK049761|4933407C03Rik|74440|RIKEN cDNA 4933407C03 gene
mm9_v1_chr2_+_48669677_48669740	0.533458	FOX{I1,J2}.p2	AK050252|Acvr2a|11480|activin receptor IIA	AK143186|Acvr2a|11480|activin receptor IIA
mm9_v1_chr18_+_60963495_60963509	0.533204	FOX{I1,J2}.p2	AK002232|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	AK020607|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	NM_001042605|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	NM_010545|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	BC003476|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	BC096435|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)	X07129|Cd74|16149|CD74 antigen (invariant polypeptide of major histocompatibility complex, class II antigen-associated)
mm9_v1_chr13_-_53472719_53472729	0.532319	FOX{I1,J2}.p2	AK084445|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	X95641|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	AK079578|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	BC046323|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1	NM_009269|Sptlc1|268656|serine palmitoyltransferase, long chain base subunit 1
mm9_v1_chr17_+_25960571_25960660	0.528367	FOX{I1,J2}.p2	NM_173741|Wdr24|268933|WD repeat domain 24	AK078694|Wdr24|268933|WD repeat domain 24	AK170253|Wdr24|268933|WD repeat domain 24	BC037651|Wdr24|268933|WD repeat domain 24
mm9_v1_chr16_-_4624877_4625001	0.527922	FOX{I1,J2}.p2	AB073618|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	BC024346|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	BC096419|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	AF349454|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	AK003227|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	AK008380|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)	NM_025571|Pam16|66449|presequence translocase-asssociated motor 16 homolog (S. cerevisiae)
mm9_v1_chr1_+_37356722_37356738	0.524088	FOX{I1,J2}.p2	AK162581|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I	NM_030266|Inpp4a|269180|inositol polyphosphate-4-phosphatase, type I
mm9_v1_chr6_+_129483238_129483284	0.52264	FOX{I1,J2}.p2	BC004602|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr5_+_99283433_99283479	0.521082	FOX{I1,J2}.p2	AK035299|Bmp3|110075|bone morphogenetic protein 3	AK040389|Bmp3|110075|bone morphogenetic protein 3	NM_173404|Bmp3|110075|bone morphogenetic protein 3	AK035393|Bmp3|110075|bone morphogenetic protein 3	AK037225|Bmp3|110075|bone morphogenetic protein 3
mm9_v1_chr10_+_73284612_73284690	0.519172	FOX{I1,J2}.p2	NM_001142735|Pcdh15|11994|protocadherin 15	NM_001142736|Pcdh15|11994|protocadherin 15	NM_001142737|Pcdh15|11994|protocadherin 15	NM_001142738|Pcdh15|11994|protocadherin 15	NM_001142739|Pcdh15|11994|protocadherin 15	NM_001142740|Pcdh15|11994|protocadherin 15	NM_001142741|Pcdh15|11994|protocadherin 15	NM_001142742|Pcdh15|11994|protocadherin 15	NM_001142743|Pcdh15|11994|protocadherin 15	NM_001142746|Pcdh15|11994|protocadherin 15	NM_001142747|Pcdh15|11994|protocadherin 15	NM_001142748|Pcdh15|11994|protocadherin 15	NM_001142760|Pcdh15|11994|protocadherin 15	NM_023115|Pcdh15|11994|protocadherin 15	AF281899|Pcdh15|11994|protocadherin 15	AY949849|Pcdh15|11994|protocadherin 15	DQ354396|Pcdh15|11994|protocadherin 15	DQ354397|Pcdh15|11994|protocadherin 15	DQ354398|Pcdh15|11994|protocadherin 15	DQ354399|Pcdh15|11994|protocadherin 15	DQ354400|Pcdh15|11994|protocadherin 15	DQ354401|Pcdh15|11994|protocadherin 15	DQ354402|Pcdh15|11994|protocadherin 15	DQ354403|Pcdh15|11994|protocadherin 15	DQ354404|Pcdh15|11994|protocadherin 15	DQ354405|Pcdh15|11994|protocadherin 15	DQ354406|Pcdh15|11994|protocadherin 15	DQ354407|Pcdh15|11994|protocadherin 15	DQ354408|Pcdh15|11994|protocadherin 15	DQ354409|Pcdh15|11994|protocadherin 15	DQ354410|Pcdh15|11994|protocadherin 15	DQ354411|Pcdh15|11994|protocadherin 15	DQ354412|Pcdh15|11994|protocadherin 15	DQ354413|Pcdh15|11994|protocadherin 15	DQ354414|Pcdh15|11994|protocadherin 15	DQ354415|Pcdh15|11994|protocadherin 15	AK139154|Pcdh15|11994|protocadherin 15	DQ354416|Pcdh15|11994|protocadherin 15	DQ354417|Pcdh15|11994|protocadherin 15	DQ354418|Pcdh15|11994|protocadherin 15
mm9_v1_chr7_+_53039273_53039322	0.519087	FOX{I1,J2}.p2	BC094377|Lmtk3|381983|lemur tyrosine kinase 3	NM_001005511|Lmtk3|381983|lemur tyrosine kinase 3	AB288873|Lmtk3|381983|lemur tyrosine kinase 3
mm9_v1_chr15_-_97077552_97077717	0.518321	FOX{I1,J2}.p2	BC095990|Amigo2|105827|adhesion molecule with Ig like domain 2	AK030848|Amigo2|105827|adhesion molecule with Ig like domain 2	AK038783|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_001164563|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_001164602|Amigo2|105827|adhesion molecule with Ig like domain 2	NM_178114|Amigo2|105827|adhesion molecule with Ig like domain 2
mm9_v1_chr16_+_3908975_3909105	0.517508	FOX{I1,J2}.p2	BC024910|Cluap1|76779|clusterin associated protein 1	NM_029738|Cluap1|76779|clusterin associated protein 1	AK009540|Cluap1|76779|clusterin associated protein 1	AK134648|Cluap1|76779|clusterin associated protein 1	AK166050|Cluap1|76779|clusterin associated protein 1	AK011846|Cluap1|76779|clusterin associated protein 1
mm9_v1_chr11_+_97702591_97702632	0.51449	FOX{I1,J2}.p2	AK081899|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK140210|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK042827|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK031146|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK035650|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK018341|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK080808|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene	AK082773|B230217C12Rik|68127|RIKEN cDNA B230217C12 gene
mm9_v1_chr7_-_13007839_13007937	0.512697	FOX{I1,J2}.p2	AK137311|Zfp551|619331|zinc fingr protein 551	NM_001033820|Zfp551|619331|zinc fingr protein 551	BC141160|Zfp551|619331|zinc fingr protein 551	BC145466|Zfp551|619331|zinc fingr protein 551
mm9_v1_chr2_-_131178551_131178627	0.508713	FOX{I1,J2}.p2	BC096529|Rnf24|51902|ring finger protein 24	AK154093|Rnf24|51902|ring finger protein 24	AK048813|Rnf24|51902|ring finger protein 24	AK015699|Rnf24|51902|ring finger protein 24	AK089207|Rnf24|51902|ring finger protein 24	AK083665|Rnf24|51902|ring finger protein 24	NM_178607|Rnf24|51902|ring finger protein 24
mm9_v1_chr7_-_135039020_135039157	0.508545	FOX{I1,J2}.p2	AK008509|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK008578|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK002742|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	BC031732|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK013996|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	AK003237|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1	NM_178600|Vkorc1|27973|vitamin K epoxide reductase complex, subunit 1
mm9_v1_chr7_+_118172447_118172534	0.505763	FOX{I1,J2}.p2	NM_009431|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK040331|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC024749|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK083921|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK045101|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK040205|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC080719|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC060091|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	AK148536|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC010344|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	BC053910|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)	L49502|Ctr9|22083|Ctr9, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
mm9_v1_chr2_+_158450623_158450686	0.505188	FOX{I1,J2}.p2	AK046312|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	AK142980|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	NM_175419|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	AK046584|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC028806|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC052039|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)	BC037522|Actr5|109275|ARP5 actin-related protein 5 homolog (yeast)
mm9_v1_chr16_-_22439642_22439745	0.503894	FOX{I1,J2}.p2	BC034680|Etv5|104156|ets variant gene 5	NM_023794|Etv5|104156|ets variant gene 5	AK031452|Etv5|104156|ets variant gene 5	AK168881|Etv5|104156|ets variant gene 5	AK049234|Etv5|104156|ets variant gene 5	AK164091|Etv5|104156|ets variant gene 5	AK018368|Etv5|104156|ets variant gene 5
mm9_v1_chr4_+_117222924_117223239	0.503773	FOX{I1,J2}.p2	AK144107|Eri3|140546|exoribonuclease 3	BC096545|Eri3|140546|exoribonuclease 3	AK083017|Eri3|140546|exoribonuclease 3	NM_080469|Eri3|140546|exoribonuclease 3	BC116685|Eri3|140546|exoribonuclease 3	BC117540|Eri3|140546|exoribonuclease 3
mm9_v1_chr19_+_46227052_46227083	0.50361	FOX{I1,J2}.p2	BC082336|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	AK019933|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1	BC011335|Gbf1|107338|golgi-specific brefeldin A-resistance factor 1
mm9_v1_chr11_+_66838648_66838688	0.502399	FOX{I1,J2}.p2	AK043094|Tmem220|338369|transmembrane protein 220	BC110628|Tmem220|338369|transmembrane protein 220	BC110629|Tmem220|338369|transmembrane protein 220	NM_177392|Tmem220|338369|transmembrane protein 220	AK078505|Tmem220|338369|transmembrane protein 220
mm9_v1_chr16_+_5885447_5885760	0.498683	FOX{I1,J2}.p2	AB041596|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	AK158194|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr18_-_12279951_12280047	0.498211	FOX{I1,J2}.p2	BC094382|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	NM_178801|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	BC137621|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK038472|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK037547|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK038419|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK031517|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK144963|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene	AK051727|6030446N20Rik|338363|RIKEN cDNA 6030446N20 gene
mm9_v1_chr4_+_129190872_129190875	0.494526	FOX{I1,J2}.p2	AK083913|Marcksl1|17357|MARCKS-like 1
mm9_v1_chr2_-_77118632_77118710	0.492786	FOX{I1,J2}.p2	BC013245|Sestd1|228071|SEC14 and spectrin domains 1	AK047939|Sestd1|228071|SEC14 and spectrin domains 1	BC044853|Sestd1|228071|SEC14 and spectrin domains 1	NM_175465|Sestd1|228071|SEC14 and spectrin domains 1
mm9_v1_chr9_+_63450444_63450525	0.492321	FOX{I1,J2}.p2	AK159897|Aagab|66939|alpha- and gamma-adaptin binding protein	NM_025857|Aagab|66939|alpha- and gamma-adaptin binding protein	BC027311|Aagab|66939|alpha- and gamma-adaptin binding protein	AK017714|Aagab|66939|alpha- and gamma-adaptin binding protein
mm9_v1_chr2_-_77008655_77008700	0.491808	FOX{I1,J2}.p2	AK045498|Ccdc141|545428|coiled-coil domain containing 141	AK011952|Ccdc141|545428|coiled-coil domain containing 141	AK053175|Ccdc141|545428|coiled-coil domain containing 141	NM_001025576|Ccdc141|545428|coiled-coil domain containing 141	AK041121|Ccdc141|545428|coiled-coil domain containing 141
mm9_v1_chr17_+_34781733_34781827	0.487796	FOX{I1,J2}.p2	AK146018|Fkbpl|56299|FK506 binding protein-like	BC046338|Fkbpl|56299|FK506 binding protein-like	NM_019873|Fkbpl|56299|FK506 binding protein-like
mm9_v1_chr1_-_84281018_84281160	0.485918	FOX{I1,J2}.p2	AK035542|Pid1|98496|phosphotyrosine interaction domain containing 1	AK083256|Pid1|98496|phosphotyrosine interaction domain containing 1	AK150971|Pid1|98496|phosphotyrosine interaction domain containing 1
mm9_v1_chr9_+_82723591_82723695	0.484553	FOX{I1,J2}.p2	AK076594|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK013036|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK045436|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	BC046301|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	BC061099|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AF093135|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK014712|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1	AK020448|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1
mm9_v1_chr11_+_90110701_90110805	0.483891	FOX{I1,J2}.p2	AK033889|Mmd|67468|monocyte to macrophage differentiation-associated	AK007961|Mmd|67468|monocyte to macrophage differentiation-associated	BC021914|Mmd|67468|monocyte to macrophage differentiation-associated	NM_026178|Mmd|67468|monocyte to macrophage differentiation-associated
mm9_v1_chr9_+_74823917_74823980	0.482969	FOX{I1,J2}.p2	BC031353|BC031353|235493|cDNA sequence BC031353	NM_153584|BC031353|235493|cDNA sequence BC031353
mm9_v1_chr3_-_127111968_127111977	0.482909	FOX{I1,J2}.p2	AK036018|Ank2|109676|ankyrin 2, brain
mm9_v1_chr10_-_126959397_126959444	0.478412	FOX{I1,J2}.p2	BC051396|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK012355|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)	AK169192|Shmt2|108037|serine hydroxymethyltransferase 2 (mitochondrial)
mm9_v1_chrX_-_34650263_34650340	0.477852	FOX{I1,J2}.p2	AK019989|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	BC058761|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	AK162222|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	AK011606|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	AK145431|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	NM_026573|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	BC117769|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)	BC117770|Upf3b|68134|UPF3 regulator of nonsense transcripts homolog B (yeast)
mm9_v1_chr14_-_73785068_73785151	0.477643	FOX{I1,J2}.p2	NM_008410|Itm2b|16432|integral membrane protein 2B	U76253|Itm2b|16432|integral membrane protein 2B	AK077482|Itm2b|16432|integral membrane protein 2B	BC010320|Itm2b|16432|integral membrane protein 2B	AK076139|Itm2b|16432|integral membrane protein 2B	AK152068|Itm2b|16432|integral membrane protein 2B	BC021786|Itm2b|16432|integral membrane protein 2B	AK152983|Itm2b|16432|integral membrane protein 2B	AK159619|Itm2b|16432|integral membrane protein 2B	AB030203|Itm2b|16432|integral membrane protein 2B	AK150378|Itm2b|16432|integral membrane protein 2B	AK150396|Itm2b|16432|integral membrane protein 2B	AK151714|Itm2b|16432|integral membrane protein 2B	AK151889|Itm2b|16432|integral membrane protein 2B	AK152516|Itm2b|16432|integral membrane protein 2B	AK152650|Itm2b|16432|integral membrane protein 2B	AK159378|Itm2b|16432|integral membrane protein 2B	AK160725|Itm2b|16432|integral membrane protein 2B
mm9_v1_chr2_-_32942666_32942723	0.476151	FOX{I1,J2}.p2	BC132143|Garnl3|99326|GTPase activating RANGAP domain-like 3	AK034068|Garnl3|99326|GTPase activating RANGAP domain-like 3	NM_178888|Garnl3|99326|GTPase activating RANGAP domain-like 3
mm9_v1_chrX_+_12619133_12619176	0.475839	FOX{I1,J2}.p2	AK134096|5730405O15Rik|70489|RIKEN cDNA 5730405O15 gene	AK017500|5730405O15Rik|70489|RIKEN cDNA 5730405O15 gene
mm9_v1_chr8_-_122364230_122364443	0.474642	FOX{I1,J2}.p2	CT010261|Cotl1|72042|coactosin-like 1 (Dictyostelium)	BC011068|Cotl1|72042|coactosin-like 1 (Dictyostelium)	BC010249|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK150888|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK007994|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK008085|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK010052|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK039644|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK151690|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK157694|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK172403|Cotl1|72042|coactosin-like 1 (Dictyostelium)	AK148854|Cotl1|72042|coactosin-like 1 (Dictyostelium)
mm9_v1_chr15_+_89041957_89042070	0.472755	FOX{I1,J2}.p2	AK084684|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	NM_026813|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	NM_027805|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	AK083335|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	BC024879|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2	AK018403|Ppp6r2|71474|protein phosphatase 6, regulatory subunit 2
mm9_v1_chr14_-_20796199_20796254	0.471479	FOX{I1,J2}.p2	AK075698|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2	AK160396|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2	AK012405|Gng2|14702|guanine nucleotide binding protein (G protein), gamma 2
mm9_v1_chr6_+_129483206_129483210	0.466291	FOX{I1,J2}.p2	AK018687|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	BC024706|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	NM_020590|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr2_+_10294062_10294208	0.464051	FOX{I1,J2}.p2	AK040600|Sfmbt2|353282|Scm-like with four mbt domains 2	NM_001198809|Sfmbt2|353282|Scm-like with four mbt domains 2	NM_177386|Sfmbt2|353282|Scm-like with four mbt domains 2	AK052339|Sfmbt2|353282|Scm-like with four mbt domains 2	BC115510|Sfmbt2|353282|Scm-like with four mbt domains 2	BC115511|Sfmbt2|353282|Scm-like with four mbt domains 2	AK147651|Sfmbt2|353282|Scm-like with four mbt domains 2
mm9_v1_chr14_-_55272452_55272539	0.463961	FOX{I1,J2}.p2	AF124725|Acin1|56215|apoptotic chromatin condensation inducer 1	AF124729|Acin1|56215|apoptotic chromatin condensation inducer 1	BC019127|Acin1|56215|apoptotic chromatin condensation inducer 1	BC094217|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_019567|Acin1|56215|apoptotic chromatin condensation inducer 1	AK012099|Acin1|56215|apoptotic chromatin condensation inducer 1	NM_001085472|Acin1|56215|apoptotic chromatin condensation inducer 1
mm9_v1_chr14_+_79826199_79826317	0.461506	FOX{I1,J2}.p2	AK135854|Kbtbd7|211255|kelch repeat and BTB (POZ) domain containing 7	BC096019|Kbtbd7|211255|kelch repeat and BTB (POZ) domain containing 7	NM_001024135|Kbtbd7|211255|kelch repeat and BTB (POZ) domain containing 7
mm9_v1_chr14_+_17197678_17197719	0.458022	FOX{I1,J2}.p2	AK087535|Top2b|21974|topoisomerase (DNA) II beta	AK163043|Top2b|21974|topoisomerase (DNA) II beta	AK041054|Top2b|21974|topoisomerase (DNA) II beta	BC041106|Top2b|21974|topoisomerase (DNA) II beta	BC054541|Top2b|21974|topoisomerase (DNA) II beta	NM_009409|Top2b|21974|topoisomerase (DNA) II beta
mm9_v1_chr7_-_13595141_13595224	0.455825	FOX{I1,J2}.p2	BC094359|Zbtb45|232879|zinc finger and BTB domain containing 45	NM_001024699|Zbtb45|232879|zinc finger and BTB domain containing 45	AK155880|Zbtb45|232879|zinc finger and BTB domain containing 45	AK166382|Zbtb45|232879|zinc finger and BTB domain containing 45	AK154877|Zbtb45|232879|zinc finger and BTB domain containing 45
mm9_v1_chrX_+_166123130_166123181	0.451988	FOX{I1,J2}.p2	AK160120|Mid1|17318|midline 1	NM_010797|Mid1|17318|midline 1	Y14848|Mid1|17318|midline 1
mm9_v1_chr1_-_75274936_75275038	0.448768	FOX{I1,J2}.p2	L34214|Resp18|19711|regulated endocrine-specific protein 18	NM_009049|Resp18|19711|regulated endocrine-specific protein 18
mm9_v1_chr6_+_45010040_45010086	0.448088	FOX{I1,J2}.p2	NM_001004357|Cntnap2|66797|contactin associated protein-like 2	AK129232|Cntnap2|66797|contactin associated protein-like 2
mm9_v1_chr5_+_136108487_136108731	0.440905	FOX{I1,J2}.p2	AK140006|Rhbdd2|215160|rhomboid domain containing 2	AK141182|Rhbdd2|215160|rhomboid domain containing 2	NM_146002|Rhbdd2|215160|rhomboid domain containing 2	AK165926|Rhbdd2|215160|rhomboid domain containing 2	AK041845|Rhbdd2|215160|rhomboid domain containing 2	AK030434|Rhbdd2|215160|rhomboid domain containing 2	AK043674|Rhbdd2|215160|rhomboid domain containing 2	BC018360|Rhbdd2|215160|rhomboid domain containing 2	BC028957|Rhbdd2|215160|rhomboid domain containing 2	AK189822|Rhbdd2|215160|rhomboid domain containing 2	AK212798|Rhbdd2|215160|rhomboid domain containing 2
mm9_v1_chr4_-_41670160_41670212	0.440801	FOX{I1,J2}.p2	AF098508|Dctn3|53598|dynactin 3	AK003255|Dctn3|53598|dynactin 3	BC061120|Dctn3|53598|dynactin 3	AK002720|Dctn3|53598|dynactin 3	AK011840|Dctn3|53598|dynactin 3	AK159344|Dctn3|53598|dynactin 3	NM_001159565|Dctn3|53598|dynactin 3	NM_016890|Dctn3|53598|dynactin 3
mm9_v1_chr6_+_30459848_30459899	0.440115	FOX{I1,J2}.p2	AK006038|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene	NM_027073|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene	BC049755|1700025E21Rik|75647|RIKEN cDNA 1700025E21 gene
mm9_v1_chr19_-_10944196_10944284	0.440077	FOX{I1,J2}.p2	BC006896|Tmem132a|98170|transmembrane protein 132A	AK173207|Tmem132a|98170|transmembrane protein 132A	AK036651|Tmem132a|98170|transmembrane protein 132A	AK032956|Tmem132a|98170|transmembrane protein 132A	AK048556|Tmem132a|98170|transmembrane protein 132A	AK164646|Tmem132a|98170|transmembrane protein 132A	NM_133804|Tmem132a|98170|transmembrane protein 132A
mm9_v1_chr18_-_84255781_84255953	0.439784	FOX{I1,J2}.p2	BC040215|Tshz1|110796|teashirt zinc finger family member 1	AK220545|Tshz1|110796|teashirt zinc finger family member 1	AK152140|Tshz1|110796|teashirt zinc finger family member 1	NM_001081300|Tshz1|110796|teashirt zinc finger family member 1
mm9_v1_chr5_+_89012537_89012542	0.4376	FOX{I1,J2}.p2	AK013185|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr4_-_136913576_136913662	0.435501	FOX{I1,J2}.p2	U37720|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167195|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	BC064792|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167400|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168013|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168076|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168089|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168276|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169232|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK144216|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK167609|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK003098|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK075567|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK145659|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK154870|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK166281|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK051543|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK151726|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168820|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK150563|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168503|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169122|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK169805|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK151087|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK153564|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK168758|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	AK159470|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)	NM_009861|Cdc42|12540|cell division cycle 42 homolog (S. cerevisiae)
mm9_v1_chr19_+_30020236_30020283	0.433901	FOX{I1,J2}.p2	AK075849|Il33|77125|interleukin 33	NM_001164724|Il33|77125|interleukin 33
mm9_v1_chr19_-_6984020_6984224	0.433386	FOX{I1,J2}.p2	AF110733|Prdx5|54683|peroxiredoxin 5	AK136130|Prdx5|54683|peroxiredoxin 5	AK002383|Prdx5|54683|peroxiredoxin 5	AK003332|Prdx5|54683|peroxiredoxin 5	AK152653|Prdx5|54683|peroxiredoxin 5	AF197951|Prdx5|54683|peroxiredoxin 5	NM_012021|Prdx5|54683|peroxiredoxin 5	AF124994|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr17_+_5343877_5344040	0.433015	FOX{I1,J2}.p2	AK049919|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK021005|Arid1b|239985|AT rich interactive domain 1B (SWI-like)	AK048918|Arid1b|239985|AT rich interactive domain 1B (SWI-like)
mm9_v1_chrX_-_147248815_147248863	0.432425	FOX{I1,J2}.p2	AJ277114|Maged2|80884|melanoma antigen, family D, 2	NM_030700|Maged2|80884|melanoma antigen, family D, 2	AK169006|Maged2|80884|melanoma antigen, family D, 2
mm9_v1_chr11_-_100683830_100683883	0.430888	FOX{I1,J2}.p2	AY040231|Stat5b|20851|signal transducer and activator of transcription 5B	AY042906|Stat5b|20851|signal transducer and activator of transcription 5B	AY044901|Stat5b|20851|signal transducer and activator of transcription 5B	AY044902|Stat5b|20851|signal transducer and activator of transcription 5B	AY044903|Stat5b|20851|signal transducer and activator of transcription 5B	U21110|Stat5b|20851|signal transducer and activator of transcription 5B	AK088966|Stat5b|20851|signal transducer and activator of transcription 5B	AK154014|Stat5b|20851|signal transducer and activator of transcription 5B	NM_011489|Stat5b|20851|signal transducer and activator of transcription 5B
mm9_v1_chr2_+_78709363_78709419	0.4294	FOX{I1,J2}.p2	AK168072|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)	AK048227|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)	AK076011|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)	X92664|Ube2e3|22193|ubiquitin-conjugating enzyme E2E 3, UBC4/5 homolog (yeast)
mm9_v1_chr9_-_107888239_107888272	0.429321	FOX{I1,J2}.p2	NM_026597|6230427J02Rik|68176|RIKEN cDNA 6230427J02 gene
mm9_v1_chr8_+_4613144_4613169	0.428781	FOX{I1,J2}.p2	BC003267|Zfp958|233987|zinc finger protein 958	AK037596|Zfp958|233987|zinc finger protein 958	AK037083|Zfp958|233987|zinc finger protein 958	NM_145591|Zfp958|233987|zinc finger protein 958
mm9_v1_chr15_-_102993757_102993775	0.427964	FOX{I1,J2}.p2	AK045411|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK172510|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK004735|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase
mm9_v1_chr3_-_95085544_95085726	0.426155	FOX{I1,J2}.p2	AF051908|Prune|229589|prune homolog (Drosophila)	AK142160|Prune|229589|prune homolog (Drosophila)	AK081637|Prune|229589|prune homolog (Drosophila)	AK020342|Prune|229589|prune homolog (Drosophila)	BC058635|Prune|229589|prune homolog (Drosophila)
mm9_v1_chr8_-_8690519_8690552	0.423318	FOX{I1,J2}.p2	BC046971|Arglu1|234023|arginine and glutamate rich 1	NM_176849|Arglu1|234023|arginine and glutamate rich 1
mm9_v1_chrX_-_100678555_100678592	0.422674	FOX{I1,J2}.p2	L04961|Xist|213742|inactive X specific transcripts	AK002727|Xist|213742|inactive X specific transcripts
mm9_v1_chr4_+_104829963_104829965	0.421499	FOX{I1,J2}.p2	BC005558|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr13_-_74346106_74346168	0.421193	FOX{I1,J2}.p2	AK012940|Exoc3|211446|exocyst complex component 3	AK131141|Exoc3|211446|exocyst complex component 3	BC031743|Exoc3|211446|exocyst complex component 3	AK088333|Exoc3|211446|exocyst complex component 3	AK141537|Exoc3|211446|exocyst complex component 3	NM_177333|Exoc3|211446|exocyst complex component 3	AK089979|Exoc3|211446|exocyst complex component 3
mm9_v1_chr7_-_17509228_17509415	0.421053	FOX{I1,J2}.p2	AK169630|Calm3|12315|calmodulin 3	BC050926|Calm3|12315|calmodulin 3	M19380|Calm3|12315|calmodulin 3	AK165568|Calm3|12315|calmodulin 3	AK153179|Calm3|12315|calmodulin 3	AK152754|Calm3|12315|calmodulin 3	AK151610|Calm3|12315|calmodulin 3	NM_007590|Calm3|12315|calmodulin 3
mm9_v1_chr16_+_17331463_17331501	0.420734	FOX{I1,J2}.p2	NM_008223|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr19_-_34736879_34736908	0.418653	FOX{I1,J2}.p2	AK090072|Gm14446|667373|predicted gene 14446
mm9_v1_chr1_-_138242666_138242682	0.418505	FOX{I1,J2}.p2	AK016014|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	AK028542|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	AK053092|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1	NM_001081360|Camsap1l1|67886|calmodulin regulated spectrin-associated protein 1-like 1
mm9_v1_chr6_-_39327637_39327722	0.417607	FOX{I1,J2}.p2	BC099673|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK076213|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK077836|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK167716|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	BC005744|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	AK145242|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3	NM_028123|Slc37a3|72144|solute carrier family 37 (glycerol-3-phosphate transporter), member 3
mm9_v1_chr10_-_127806232_127806252	0.41707	FOX{I1,J2}.p2	AK080862|Coq10a|210582|coenzyme Q10 homolog A (yeast)	BC147716|Coq10a|210582|coenzyme Q10 homolog A (yeast)	BC147722|Coq10a|210582|coenzyme Q10 homolog A (yeast)
mm9_v1_chr14_-_37911383_37911496	0.414972	FOX{I1,J2}.p2	AF426393|Cdhr1|170677|cadherin-related family member 1	BC042454|Cdhr1|170677|cadherin-related family member 1	AK143151|Cdhr1|170677|cadherin-related family member 1	BC058270|Cdhr1|170677|cadherin-related family member 1	NM_130878|Cdhr1|170677|cadherin-related family member 1
mm9_v1_chr19_-_4037895_4037928	0.413501	FOX{I1,J2}.p2	D30687|Gstp1|14870|glutathione S-transferase, pi 1	NM_013541|Gstp1|14870|glutathione S-transferase, pi 1	BC002048|Gstp1|14870|glutathione S-transferase, pi 1	BC061109|Gstp1|14870|glutathione S-transferase, pi 1
mm9_v1_chr3_+_89006824_89006905	0.411387	FOX{I1,J2}.p2	AK082767|Gba|14466|glucosidase, beta, acid	NM_001077411|Gba|14466|glucosidase, beta, acid	AK201806|Gba|14466|glucosidase, beta, acid	AK166198|Gba|14466|glucosidase, beta, acid	BC006663|Gba|14466|glucosidase, beta, acid	NM_008094|Gba|14466|glucosidase, beta, acid	AK152745|Gba|14466|glucosidase, beta, acid
mm9_v1_chrX_+_21061748_21061785	0.410382	FOX{I1,J2}.p2	AK140941|Agtr2|11609|angiotensin II receptor, type 2	AK086334|Agtr2|11609|angiotensin II receptor, type 2	NM_007429|Agtr2|11609|angiotensin II receptor, type 2	L32840|Agtr2|11609|angiotensin II receptor, type 2	S67465|Agtr2|11609|angiotensin II receptor, type 2	U04828|Agtr2|11609|angiotensin II receptor, type 2
mm9_v1_chr12_-_86039703_86039802	0.410288	FOX{I1,J2}.p2	AY993933|Tmem90a|627191|transmembrane protein 90a	AK140195|Tmem90a|627191|transmembrane protein 90a	NM_001033334|Tmem90a|627191|transmembrane protein 90a	AY993934|Tmem90a|627191|transmembrane protein 90a
mm9_v1_chr11_+_93905443_93905464	0.406374	FOX{I1,J2}.p2	AK147537|Spag9|70834|sperm associated antigen 9	AK147431|Spag9|70834|sperm associated antigen 9
mm9_v1_chr3_+_94736974_94736989	0.405705	FOX{I1,J2}.p2	AK002447|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr18_+_75160121_75160211	0.405075	FOX{I1,J2}.p2	NM_001002239|Rpl17|319195|ribosomal protein L17	BC091759|Rpl17|319195|ribosomal protein L17	AK088443|Rpl17|319195|ribosomal protein L17	AK002770|Rpl17|319195|ribosomal protein L17	AK011132|Rpl17|319195|ribosomal protein L17	AK011133|Rpl17|319195|ribosomal protein L17	AK137077|Rpl17|319195|ribosomal protein L17	BC090990|Rpl17|319195|ribosomal protein L17
mm9_v1_chr8_-_11635748_11635782	0.404149	FOX{I1,J2}.p2	AK031808|Ankrd10|102334|ankyrin repeat domain 10	AK033623|Ankrd10|102334|ankyrin repeat domain 10	AK038156|Ankrd10|102334|ankyrin repeat domain 10	AK042500|Ankrd10|102334|ankyrin repeat domain 10	AK081754|Ankrd10|102334|ankyrin repeat domain 10	AK082875|Ankrd10|102334|ankyrin repeat domain 10	AK084456|Ankrd10|102334|ankyrin repeat domain 10	AK143253|Ankrd10|102334|ankyrin repeat domain 10	NM_001167967|Ankrd10|102334|ankyrin repeat domain 10	NM_133971|Ankrd10|102334|ankyrin repeat domain 10	AK050983|Ankrd10|102334|ankyrin repeat domain 10
mm9_v1_chrX_-_106029678_106029693	0.404133	FOX{I1,J2}.p2	AK050539|Brwd3|382236|bromodomain and WD repeat domain containing 3	AK163354|Brwd3|382236|bromodomain and WD repeat domain containing 3	NM_001081477|Brwd3|382236|bromodomain and WD repeat domain containing 3
mm9_v1_chr8_+_121868362_121868462	0.40345	FOX{I1,J2}.p2	AK050550|Hsbp1|68196|heat shock factor binding protein 1	AK018708|Hsbp1|68196|heat shock factor binding protein 1	AK078498|Hsbp1|68196|heat shock factor binding protein 1	AK145940|Hsbp1|68196|heat shock factor binding protein 1	BC002153|Hsbp1|68196|heat shock factor binding protein 1	NM_024219|Hsbp1|68196|heat shock factor binding protein 1
mm9_v1_chr4_-_11892848_11892892	0.401495	FOX{I1,J2}.p2	BC048372|Pdp1|381511|pyruvate dehyrogenase phosphatase catalytic subunit 1	NM_001098231|Pdp1|381511|pyruvate dehyrogenase phosphatase catalytic subunit 1
mm9_v1_chr4_-_12015073_12015153	0.40106	FOX{I1,J2}.p2	AK017238|Tmem67|329795|transmembrane protein 67	AK039177|Tmem67|329795|transmembrane protein 67	AK042835|Tmem67|329795|transmembrane protein 67	AK133059|Tmem67|329795|transmembrane protein 67	AK045429|Tmem67|329795|transmembrane protein 67	NM_177861|Tmem67|329795|transmembrane protein 67	AK077246|Tmem67|329795|transmembrane protein 67
mm9_v1_chr8_-_63433528_63433596	0.400421	FOX{I1,J2}.p2	BC057133|Clcn3|12725|chloride channel 3	NM_173876|Clcn3|12725|chloride channel 3
mm9_v1_chr8_-_114378162_114378252	0.398963	FOX{I1,J2}.p2	AK160532|Cfdp1|23837|craniofacial development protein 1	BC005589|Cfdp1|23837|craniofacial development protein 1	AB010828|Cfdp1|23837|craniofacial development protein 1	NM_011801|Cfdp1|23837|craniofacial development protein 1	Y08219|Cfdp1|23837|craniofacial development protein 1	AK133989|Cfdp1|23837|craniofacial development protein 1
mm9_v1_chr7_+_129210954_129210978	0.398277	FOX{I1,J2}.p2	AK011862|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr1_+_94803538_94803618	0.39817	FOX{I1,J2}.p2	AK163560|Dusp28|67446|dual specificity phosphatase 28	AK002934|Dusp28|67446|dual specificity phosphatase 28	NM_175118|Dusp28|67446|dual specificity phosphatase 28	BC119127|Dusp28|67446|dual specificity phosphatase 28	BC051598|Dusp28|67446|dual specificity phosphatase 28	AK088940|Dusp28|67446|dual specificity phosphatase 28
mm9_v1_chr4_+_13678443_13678575	0.39805	FOX{I1,J2}.p2	NM_001111027|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr18_-_35900005_35900208	0.397857	FOX{I1,J2}.p2	DQ910493|Tmem173|72512|transmembrane protein 173	AK153868|Tmem173|72512|transmembrane protein 173	AK146284|Tmem173|72512|transmembrane protein 173	AX775911|Tmem173|72512|transmembrane protein 173	AK077788|Tmem173|72512|transmembrane protein 173	AK157370|Tmem173|72512|transmembrane protein 173	AK158458|Tmem173|72512|transmembrane protein 173	BC046640|Tmem173|72512|transmembrane protein 173	AK171612|Tmem173|72512|transmembrane protein 173	AK012006|Tmem173|72512|transmembrane protein 173	AK171065|Tmem173|72512|transmembrane protein 173	AK171203|Tmem173|72512|transmembrane protein 173	AK089405|Tmem173|72512|transmembrane protein 173	AK170724|Tmem173|72512|transmembrane protein 173	NM_028261|Tmem173|72512|transmembrane protein 173
mm9_v1_chr12_-_15822792_15822800	0.397194	FOX{I1,J2}.p2	AK080064|Trib2|217410|tribbles homolog 2 (Drosophila)	AK082329|Trib2|217410|tribbles homolog 2 (Drosophila)
mm9_v1_chr7_+_25039812_25039838	0.395541	FOX{I1,J2}.p2	AK032355|Zfp108|54678|zinc finger protein 108	NM_018791|Zfp108|54678|zinc finger protein 108	AF167315|Zfp108|54678|zinc finger protein 108
mm9_v1_chr11_+_22872062_22872100	0.395469	FOX{I1,J2}.p2	AK165562|Zrsr1|22183|zinc finger (CCCH type), RNA binding motif and serine/arginine rich 1
mm9_v1_chr15_+_5135711_5135737	0.394393	FOX{I1,J2}.p2	AK013464|Ttc33|67515|tetratricopeptide repeat domain 33	BC017533|Ttc33|67515|tetratricopeptide repeat domain 33	AK075643|Ttc33|67515|tetratricopeptide repeat domain 33
mm9_v1_chr3_+_67696141_67696177	0.394103	FOX{I1,J2}.p2	AK052136|Iqcj|208426|IQ motif containing J	NM_001113419|Iqcj-schip1|100505386|IQ motif containing J-schwannomin interacting protein 1 read-through transcript	NM_177585|Iqcj|208426|IQ motif containing J	BC107305|Iqcj|208426|IQ motif containing J	BC107306|Iqcj|208426|IQ motif containing J
mm9_v1_chr3_-_87734096_87734116	0.392949	FOX{I1,J2}.p2	NM_153562|Rrnad1|229503|ribosomal RNA adenine dimethylase domain containing 1
mm9_v1_chr19_+_37624879_37624965	0.390499	FOX{I1,J2}.p2	AK151524|Exoc6|107371|exocyst complex component 6	AK151838|Exoc6|107371|exocyst complex component 6	NM_175353|Exoc6|107371|exocyst complex component 6	AK082881|Exoc6|107371|exocyst complex component 6	BC026859|Exoc6|107371|exocyst complex component 6
mm9_v1_chr8_-_42140113_42140147	0.389951	FOX{I1,J2}.p2	BC043321|Mtus1|102103|mitochondrial tumor suppressor 1	AK043214|Mtus1|102103|mitochondrial tumor suppressor 1	AY626782|Mtus1|102103|mitochondrial tumor suppressor 1	NM_001005864|Mtus1|102103|mitochondrial tumor suppressor 1
mm9_v1_chrX_+_35953741_35953908	0.389529	FOX{I1,J2}.p2	AK087975|Mcts1|68995|malignant T cell amplified sequence 1	AK005292|Mcts1|68995|malignant T cell amplified sequence 1	NM_026902|Mcts1|68995|malignant T cell amplified sequence 1	BC010486|Mcts1|68995|malignant T cell amplified sequence 1
mm9_v1_chr18_+_65048630_65048682	0.389094	FOX{I1,J2}.p2	AK042621|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr2_-_59720568_59720662	0.388925	FOX{I1,J2}.p2	AK178836|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	AK011391|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	BC050792|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	BC061948|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	NM_001159636|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1	NM_028118|Wdsub1|72137|WD repeat, SAM and U-box domain containing 1
mm9_v1_chr1_+_174628164_174628196	0.3888	FOX{I1,J2}.p2	AK050392|Crp|12944|C-reactive protein, pentraxin-related	NM_007768|Crp|12944|C-reactive protein, pentraxin-related	X17496|Crp|12944|C-reactive protein, pentraxin-related	AK088477|Crp|12944|C-reactive protein, pentraxin-related	BC011124|Crp|12944|C-reactive protein, pentraxin-related
mm9_v1_chr2_+_121184334_121184455	0.386947	FOX{I1,J2}.p2	AK131953|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	NM_009897|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	Z13968|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK005076|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous	AK018487|Ckmt1|12716|creatine kinase, mitochondrial 1, ubiquitous
mm9_v1_chr6_-_98978185_98978383	0.386537	FOX{I1,J2}.p2	AK077062|Foxp1|108655|forkhead box P1	AK144920|Foxp1|108655|forkhead box P1	NM_001197322|Foxp1|108655|forkhead box P1
mm9_v1_chr5_+_110605872_110605990	0.386087	FOX{I1,J2}.p2	AK171773|Golga3|269682|golgi autoantigen, golgin subfamily a, 3	AK133623|Golga3|269682|golgi autoantigen, golgin subfamily a, 3	D78270|Golga3|269682|golgi autoantigen, golgin subfamily a, 3
mm9_v1_chr19_-_60302571_60302605	0.385498	FOX{I1,J2}.p2	BC056640|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK011404|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK044853|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	AK075914|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	NM_029648|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed	BC048505|D19Ertd737e|76539|DNA segment, Chr 19, ERATO Doi 737, expressed
mm9_v1_chr8_-_72149357_72149431	0.38546	FOX{I1,J2}.p2	AK083009|Zfp868|234362|zinc finger protein 868
mm9_v1_chr19_-_7473566_7473625	0.384833	FOX{I1,J2}.p2	
mm9_v1_chr12_+_33832550_33832590	0.383779	FOX{I1,J2}.p2	NM_028139|Atxn7l1|380753|ataxin 7-like 1
mm9_v1_chr2_+_152495196_152495240	0.38349	FOX{I1,J2}.p2	NM_001159551|H13|14950|histocompatibility 13	NM_001159552|H13|14950|histocompatibility 13	NM_001159553|H13|14950|histocompatibility 13	NM_010376|H13|14950|histocompatibility 13	AJ345032|H13|14950|histocompatibility 13	BC056977|H13|14950|histocompatibility 13	DQ168449|H13|14950|histocompatibility 13	AK012600|H13|14950|histocompatibility 13	AK007664|H13|14950|histocompatibility 13	AK004690|H13|14950|histocompatibility 13	AK019877|H13|14950|histocompatibility 13	AK039008|H13|14950|histocompatibility 13	AK049101|H13|14950|histocompatibility 13	AK159176|H13|14950|histocompatibility 13	AK028109|H13|14950|histocompatibility 13	AF483214|H13|14950|histocompatibility 13	AK080966|H13|14950|histocompatibility 13	AK169922|H13|14950|histocompatibility 13
mm9_v1_chr5_-_145962668_145962756	0.381734	FOX{I1,J2}.p2	BC099448|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	BC141244|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	U62906|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	BC027512|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	AK153972|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	AK013258|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	AK009842|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	AK138775|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14	NM_023322|Zkscan14|67235|zinc finger with KRAB and SCAN domains 14
mm9_v1_chr8_-_34858230_34858241	0.38173	FOX{I1,J2}.p2	AK012595|2700090O03Rik|72632|RIKEN cDNA 2700090O03 gene
mm9_v1_chr8_+_96335202_96335227	0.38147	FOX{I1,J2}.p2	M36778|Gnao1|14681|guanine nucleotide binding protein, alpha O	M36777|Gnao1|14681|guanine nucleotide binding protein, alpha O
mm9_v1_chr12_+_110800212_110800261	0.381163	FOX{I1,J2}.p2	AK018142|Meg3|17263|maternally expressed 3
mm9_v1_chr7_-_49897957_49897973	0.380259	FOX{I1,J2}.p2	AK162659|C330019L16Rik|208111|RIKEN cDNA C330019L16 gene	NM_001034857|C330019L16Rik|208111|RIKEN cDNA C330019L16 gene	AK141688|C330019L16Rik|208111|RIKEN cDNA C330019L16 gene
mm9_v1_chr11_-_121090386_121090415	0.380063	FOX{I1,J2}.p2	AK201274|BC017643|217370|cDNA sequence BC017643
mm9_v1_chr11_-_72609306_72609347	0.379994	FOX{I1,J2}.p2	BC086682|Cyb5d2|192986|cytochrome b5 domain containing 2	NM_001024926|Cyb5d2|192986|cytochrome b5 domain containing 2	AK142515|Cyb5d2|192986|cytochrome b5 domain containing 2
mm9_v1_chr15_-_102993714_102993747	0.379338	FOX{I1,J2}.p2	BC062960|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	NM_027885|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK090367|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK198888|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase	AK204061|Smug1|71726|single-strand selective monofunctional uracil DNA glycosylase
mm9_v1_chr4_-_91042997_91043190	0.378317	FOX{I1,J2}.p2	AK149201|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	AK141919|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)	NM_001177883|Elavl2|15569|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 2 (Hu antigen B)
mm9_v1_chr9_+_110379481_110379600	0.376581	FOX{I1,J2}.p2	AK029776|Kif9|16578|kinesin family member 9	AK087008|Kif9|16578|kinesin family member 9	NM_001163569|Kif9|16578|kinesin family member 9	AJ132889|Kif9|16578|kinesin family member 9	BC115765|Kif9|16578|kinesin family member 9	AK029506|Kif9|16578|kinesin family member 9
mm9_v1_chr4_+_126287086_126287097	0.376046	FOX{I1,J2}.p2	NM_001013755|5730409E04Rik|230757|RIKEN cDNA 5730409E04Rik gene	NM_001145950|5730409E04Rik|230757|RIKEN cDNA 5730409E04Rik gene
mm9_v1_chr17_-_25974021_25974145	0.375619	FOX{I1,J2}.p2	BC021549|Rhbdl1|214951|rhomboid, veinlet-like 1 (Drosophila)	NM_144816|Rhbdl1|214951|rhomboid, veinlet-like 1 (Drosophila)	AK140428|Rhbdl1|214951|rhomboid, veinlet-like 1 (Drosophila)
mm9_v1_chr2_-_126758970_126758970	0.374349	FOX{I1,J2}.p2	AB041547|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene	NM_023220|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene
mm9_v1_chr2_+_29658139_29658348	0.374178	FOX{I1,J2}.p2	AK170377|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	AK036919|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	NM_011989|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	AK155313|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	AK155388|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	AK196043|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4	BC023114|Slc27a4|26569|solute carrier family 27 (fatty acid transporter), member 4
mm9_v1_chr18_-_23197156_23197163	0.372695	FOX{I1,J2}.p2	BC056377|Nol4|319211|nucleolar protein 4	NM_001161483|Nol4|319211|nucleolar protein 4
mm9_v1_chr10_+_120471059_120471111	0.372598	FOX{I1,J2}.p2	AK077698|Wif1|24117|Wnt inhibitory factor 1	AK142443|Wif1|24117|Wnt inhibitory factor 1	AK158359|Wif1|24117|Wnt inhibitory factor 1	NM_011915|Wif1|24117|Wnt inhibitory factor 1
mm9_v1_chr2_-_113669159_113669225	0.372257	FOX{I1,J2}.p2	AK031856|Scg5|20394|secretogranin V	AK011938|Scg5|20394|secretogranin V	AK003049|Scg5|20394|secretogranin V	AK161556|Scg5|20394|secretogranin V	AK161579|Scg5|20394|secretogranin V	AK005331|Scg5|20394|secretogranin V	X15830|Scg5|20394|secretogranin V
mm9_v1_chr3_-_146433544_146433656	0.37191	FOX{I1,J2}.p2	AK163585|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	AK148728|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta	NM_001164199|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr18_-_46372017_46372260	0.371634	FOX{I1,J2}.p2	AY251389|Trim36|28105|tripartite motif-containing 36	AB103063|Trim36|28105|tripartite motif-containing 36	BC058106|Trim36|28105|tripartite motif-containing 36	NM_178872|Trim36|28105|tripartite motif-containing 36
mm9_v1_chr7_+_19868009_19868016	0.371278	FOX{I1,J2}.p2	AK144271|Rtn2|20167|reticulon 2 (Z-band associated protein)	BC031370|Rtn2|20167|reticulon 2 (Z-band associated protein)	NM_013648|Rtn2|20167|reticulon 2 (Z-band associated protein)	AF038538|Rtn2|20167|reticulon 2 (Z-band associated protein)
mm9_v1_chr1_+_75139300_75139429	0.368368	FOX{I1,J2}.p2	AK034667|Fam134a|227298|family with sequence similarity 134, member A	NM_170755|Fam134a|227298|family with sequence similarity 134, member A	AK172093|Fam134a|227298|family with sequence similarity 134, member A	BC070406|Fam134a|227298|family with sequence similarity 134, member A	AK165957|Fam134a|227298|family with sequence similarity 134, member A	AK160400|Fam134a|227298|family with sequence similarity 134, member A
mm9_v1_chrX_+_20374922_20374939	0.368064	FOX{I1,J2}.p2	AK034861|Araf|11836|v-raf murine sarcoma 3611 viral oncogene homolog
mm9_v1_chr4_+_126287109_126287125	0.366449	FOX{I1,J2}.p2	AK077438|5730409E04Rik|230757|RIKEN cDNA 5730409E04Rik gene
mm9_v1_chr5_-_100588412_100588450	0.363458	FOX{I1,J2}.p2	AK044702|Tmem150c|231503|transmembrane protein 150C
mm9_v1_chrX_-_161764912_161765057	0.361144	FOX{I1,J2}.p2	BC056342|Glra2|237213|glycine receptor, alpha 2 subunit	BC068987|Glra2|237213|glycine receptor, alpha 2 subunit	NM_183427|Glra2|237213|glycine receptor, alpha 2 subunit	AK135134|Glra2|237213|glycine receptor, alpha 2 subunit
mm9_v1_chr5_+_89012596_89012599	0.360991	FOX{I1,J2}.p2	BC049127|Rufy3|52822|RUN and FYVE domain containing 3	NM_027530|Rufy3|52822|RUN and FYVE domain containing 3
mm9_v1_chr10_+_80639393_80639464	0.359975	FOX{I1,J2}.p2	AK146947|Eef2|13629|eukaryotic translation elongation factor 2	AK169013|Eef2|13629|eukaryotic translation elongation factor 2	AK028938|Eef2|13629|eukaryotic translation elongation factor 2	AK168874|Eef2|13629|eukaryotic translation elongation factor 2	BC007152|Eef2|13629|eukaryotic translation elongation factor 2	BC013263|Eef2|13629|eukaryotic translation elongation factor 2	AK200555|Eef2|13629|eukaryotic translation elongation factor 2	AK151812|Eef2|13629|eukaryotic translation elongation factor 2	AK185912|Eef2|13629|eukaryotic translation elongation factor 2	AK214133|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr8_+_4613206_4613229	0.359634	FOX{I1,J2}.p2	BC138223|Zfp958|233987|zinc finger protein 958	BC145996|Zfp958|233987|zinc finger protein 958
mm9_v1_chr9_+_92502076_92502169	0.359179	FOX{I1,J2}.p2	
mm9_v1_chr1_-_37486768_37486947	0.358571	FOX{I1,J2}.p2	AK177444|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK218336|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK018255|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK040907|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK050432|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	BC002137|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK166651|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	AK169639|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene	NM_198006|6330578E17Rik|76178|RIKEN cDNA 6330578E17 gene
mm9_v1_chrX_+_71574403_71574439	0.356507	FOX{I1,J2}.p2	NM_008883|Plxna3|18846|plexin A3	BC093482|Plxna3|18846|plexin A3	D86950|Plxna3|18846|plexin A3
mm9_v1_chr5_-_124171015_124171067	0.356208	FOX{I1,J2}.p2	AK156770|Zcchc8|70650|zinc finger, CCHC domain containing 8	AK032349|Zcchc8|70650|zinc finger, CCHC domain containing 8	NM_027494|Zcchc8|70650|zinc finger, CCHC domain containing 8
mm9_v1_chr9_-_82868992_82869032	0.354653	FOX{I1,J2}.p2	AJ303103|Phip|83946|pleckstrin homology domain interacting protein	AB049460|Phip|83946|pleckstrin homology domain interacting protein	BC037036|Phip|83946|pleckstrin homology domain interacting protein	AK044935|Phip|83946|pleckstrin homology domain interacting protein	BC049950|Phip|83946|pleckstrin homology domain interacting protein	AK049736|Phip|83946|pleckstrin homology domain interacting protein	AK136530|Phip|83946|pleckstrin homology domain interacting protein
mm9_v1_chr4_-_56960287_56960321	0.354328	FOX{I1,J2}.p2	AK052826|D730040F13Rik|242474|RIKEN cDNA D730040F13 gene	AK085364|D730040F13Rik|242474|RIKEN cDNA D730040F13 gene	NM_175518|D730040F13Rik|242474|RIKEN cDNA D730040F13 gene
mm9_v1_chr12_+_12268901_12269011	0.353493	FOX{I1,J2}.p2	NM_001146119|Fam49a|76820|family with sequence similarity 49, member A	NM_029758|Fam49a|76820|family with sequence similarity 49, member A	AK047142|Fam49a|76820|family with sequence similarity 49, member A	BC049664|Fam49a|76820|family with sequence similarity 49, member A
mm9_v1_chr11_-_69495447_69495585	0.352338	FOX{I1,J2}.p2	NM_030702|Senp3|80886|SUMO/sentrin specific peptidase 3	AK088608|Senp3|80886|SUMO/sentrin specific peptidase 3	NM_001163571|Senp3|80886|SUMO/sentrin specific peptidase 3
mm9_v1_chr2_-_120796395_120796492	0.350003	FOX{I1,J2}.p2	AF061555|Ubr1|22222|ubiquitin protein ligase E3 component n-recognin 1	NM_009461|Ubr1|22222|ubiquitin protein ligase E3 component n-recognin 1
mm9_v1_chr4_-_140991985_140992019	0.349839	FOX{I1,J2}.p2	BC147054|Gm694|277744|predicted gene 694	BC147055|Gm694|277744|predicted gene 694	AK145525|Gm694|277744|predicted gene 694	NM_001033374|Gm694|277744|predicted gene 694
mm9_v1_chr7_+_51565563_51565633	0.349746	FOX{I1,J2}.p2	NM_001034115|Shank1|243961|SH3/ankyrin domain gene 1
mm9_v1_chrX_+_82293610_82293751	0.349244	FOX{I1,J2}.p2	AK045257|Dmd|13405|dystrophin, muscular dystrophy	AK013510|Dmd|13405|dystrophin, muscular dystrophy	AK075809|Dmd|13405|dystrophin, muscular dystrophy	AK087829|Dmd|13405|dystrophin, muscular dystrophy	AK036936|Dmd|13405|dystrophin, muscular dystrophy
mm9_v1_chr4_-_134409199_134409236	0.345906	FOX{I1,J2}.p2	BC042733|Tmem57|66146|transmembrane protein 57	BC044802|Tmem57|66146|transmembrane protein 57	BC037192|Tmem57|66146|transmembrane protein 57	BC019186|Tmem57|66146|transmembrane protein 57	AK020354|Tmem57|66146|transmembrane protein 57
mm9_v1_chr8_+_13869640_13869740	0.345335	FOX{I1,J2}.p2	NM_181854|Zfp828|101994|zinc finger protein 828	AK132164|Zfp828|101994|zinc finger protein 828	AK170835|Zfp828|101994|zinc finger protein 828	AK139963|Zfp828|101994|zinc finger protein 828	AK133990|Zfp828|101994|zinc finger protein 828	BC028991|Zfp828|101994|zinc finger protein 828	AK129444|Zfp828|101994|zinc finger protein 828
mm9_v1_chr13_-_76155834_76156159	0.34334	FOX{I1,J2}.p2	AK029602|Rfesd|218341|Rieske (Fe-S) domain containing	AK163574|Rfesd|218341|Rieske (Fe-S) domain containing	AK040255|Rfesd|218341|Rieske (Fe-S) domain containing	AK083705|Rfesd|218341|Rieske (Fe-S) domain containing	NM_178916|Rfesd|218341|Rieske (Fe-S) domain containing	NM_001131068|Rfesd|218341|Rieske (Fe-S) domain containing	BC030381|Rfesd|218341|Rieske (Fe-S) domain containing	NM_001131069|Rfesd|218341|Rieske (Fe-S) domain containing
mm9_v1_chr17_-_45570469_45570504	0.34138	FOX{I1,J2}.p2	BC003893|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK150562|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK150861|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK146892|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK172950|Cdc5l|71702|cell division cycle 5-like (S. pombe)
mm9_v1_chr2_-_132403964_132404008	0.340314	FOX{I1,J2}.p2	AK031658|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_001042671|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_001042672|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)	NM_028802|Gpcpd1|74182|glycerophosphocholine phosphodiesterase GDE1 homolog (S. cerevisiae)
mm9_v1_chr1_-_107253245_107253286	0.339066	FOX{I1,J2}.p2	AK044638|Rnf152|320311|ring finger protein 152	NM_001160368|Rnf152|320311|ring finger protein 152	NM_178779|Rnf152|320311|ring finger protein 152
mm9_v1_chr2_-_155127037_155127091	0.339003	FOX{I1,J2}.p2	BC013076|Pigu|228812|phosphatidylinositol glycan anchor biosynthesis, class U
mm9_v1_chr2_-_154196611_154196692	0.338671	FOX{I1,J2}.p2	BC025132|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1
mm9_v1_chr11_-_51449228_51449289	0.337307	FOX{I1,J2}.p2	BC016075|Rmnd5b|66089|required for meiotic nuclear division 5 homolog B (S. cerevisiae)
mm9_v1_chrX_-_72823345_72823551	0.337166	FOX{I1,J2}.p2	AB232636|Rab39b|67790|RAB39B, member RAS oncogene family	BC052472|Rab39b|67790|RAB39B, member RAS oncogene family	AK039013|Rab39b|67790|RAB39B, member RAS oncogene family	AK048981|Rab39b|67790|RAB39B, member RAS oncogene family	AK160737|Rab39b|67790|RAB39B, member RAS oncogene family	NM_175122|Rab39b|67790|RAB39B, member RAS oncogene family	AK018257|Rab39b|67790|RAB39B, member RAS oncogene family	AK020665|Rab39b|67790|RAB39B, member RAS oncogene family
mm9_v1_chr10_+_115254308_115254566	0.337039	FOX{I1,J2}.p2	AK087696|Tspan8|216350|tetraspanin 8	AK077301|Tspan8|216350|tetraspanin 8	BC027777|Tspan8|216350|tetraspanin 8	BC029808|Tspan8|216350|tetraspanin 8	NM_001168679|Tspan8|216350|tetraspanin 8	NM_001168680|Tspan8|216350|tetraspanin 8	NM_146010|Tspan8|216350|tetraspanin 8	BC029068|Tspan8|216350|tetraspanin 8	BC025461|Tspan8|216350|tetraspanin 8	BC034198|Tspan8|216350|tetraspanin 8
mm9_v1_chr10_+_34017221_34017318	0.336508	FOX{I1,J2}.p2	NM_030203|Tspyl4|72480|TSPY-like 4	AK034070|Tspyl4|72480|TSPY-like 4	AK158197|Tspyl4|72480|TSPY-like 4	BC017540|Tspyl4|72480|TSPY-like 4	BC034656|Tspyl4|72480|TSPY-like 4	AK030740|Tspyl4|72480|TSPY-like 4	AK034414|Tspyl4|72480|TSPY-like 4	AK020999|Tspyl4|72480|TSPY-like 4
mm9_v1_chr7_+_30644997_30645134	0.335392	FOX{I1,J2}.p2	NM_172740|Zfp420|233058|zinc finger protein 420	AK029387|Zfp420|233058|zinc finger protein 420	AK045435|Zfp420|233058|zinc finger protein 420	BC050249|Zfp420|233058|zinc finger protein 420	BC055817|Zfp420|233058|zinc finger protein 420	AK045821|Zfp420|233058|zinc finger protein 420
mm9_v1_chr1_-_133421746_133421916	0.335072	FOX{I1,J2}.p2	BC158055|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2	BC151081|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2	BC151082|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2	BC172152|Srgap2|14270|SLIT-ROBO Rho GTPase activating protein 2
mm9_v1_chr1_-_168339909_168339980	0.334383	FOX{I1,J2}.p2	AK031716|Pogk|71592|pogo transposable element with KRAB domain	BC072587|Pogk|71592|pogo transposable element with KRAB domain	AK048067|Pogk|71592|pogo transposable element with KRAB domain	AK048752|Pogk|71592|pogo transposable element with KRAB domain	AK053898|Pogk|71592|pogo transposable element with KRAB domain	NM_001142948|Pogk|71592|pogo transposable element with KRAB domain	NM_175170|Pogk|71592|pogo transposable element with KRAB domain
mm9_v1_chr19_-_8797689_8797858	0.334286	FOX{I1,J2}.p2	AK161280|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2	NM_001161413|Slc3a2|17254|solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
mm9_v1_chr7_-_36181628_36181850	0.333283	FOX{I1,J2}.p2	BC096687|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK153918|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK082457|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	NM_178643|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK040248|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK031566|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene	AK166481|C230052I12Rik|101831|RIKEN cDNA C230052I12 gene
mm9_v1_chr15_-_36426471_36426537	0.332369	FOX{I1,J2}.p2	AK088304|Ankrd46|68839|ankyrin repeat domain 46	AK148049|Ankrd46|68839|ankyrin repeat domain 46	BC094595|Ankrd46|68839|ankyrin repeat domain 46	BC086659|Ankrd46|68839|ankyrin repeat domain 46
mm9_v1_chr4_-_62131905_62131926	0.330289	FOX{I1,J2}.p2	AF274321|Wdr31|71354|WD repeat domain 31	NM_023597|Wdr31|71354|WD repeat domain 31	BC037102|Wdr31|71354|WD repeat domain 31	AK017259|Wdr31|71354|WD repeat domain 31	AK141026|Wdr31|71354|WD repeat domain 31
mm9_v1_chr5_-_123271283_123271353	0.32672	FOX{I1,J2}.p2	AK147951|Anapc5|59008|anaphase-promoting complex subunit 5	BC046804|Anapc5|59008|anaphase-promoting complex subunit 5	AK075969|Anapc5|59008|anaphase-promoting complex subunit 5	AK159713|Anapc5|59008|anaphase-promoting complex subunit 5	AK159916|Anapc5|59008|anaphase-promoting complex subunit 5	AK167561|Anapc5|59008|anaphase-promoting complex subunit 5	AK168737|Anapc5|59008|anaphase-promoting complex subunit 5	AK168814|Anapc5|59008|anaphase-promoting complex subunit 5	AB041593|Anapc5|59008|anaphase-promoting complex subunit 5	AK151314|Anapc5|59008|anaphase-promoting complex subunit 5	AK151905|Anapc5|59008|anaphase-promoting complex subunit 5	AK152981|Anapc5|59008|anaphase-promoting complex subunit 5	AK153373|Anapc5|59008|anaphase-promoting complex subunit 5	AK153422|Anapc5|59008|anaphase-promoting complex subunit 5	AK159204|Anapc5|59008|anaphase-promoting complex subunit 5	AK148679|Anapc5|59008|anaphase-promoting complex subunit 5	AK049719|Anapc5|59008|anaphase-promoting complex subunit 5	AK169196|Anapc5|59008|anaphase-promoting complex subunit 5	AK088327|Anapc5|59008|anaphase-promoting complex subunit 5	NM_001042491|Anapc5|59008|anaphase-promoting complex subunit 5	NM_021505|Anapc5|59008|anaphase-promoting complex subunit 5
mm9_v1_chr11_+_4795308_4795373	0.326113	FOX{I1,J2}.p2	AK040311|Thoc5|107829|THO complex 5	AK050734|Thoc5|107829|THO complex 5	NM_172438|Thoc5|107829|THO complex 5	BC039758|Thoc5|107829|THO complex 5	AK087099|Thoc5|107829|THO complex 5
mm9_v1_chr1_+_129101551_129101562	0.323578	FOX{I1,J2}.p2	NM_145128|Mgat5|107895|mannoside acetylglucosaminyltransferase 5
mm9_v1_chr6_+_47827535_47827591	0.321456	FOX{I1,J2}.p2	NM_146175|Zfp282|101095|zinc finger protein 282	AK088531|Zfp282|101095|zinc finger protein 282	AK148038|Zfp282|101095|zinc finger protein 282
mm9_v1_chr12_-_86611513_86611563	0.320753	FOX{I1,J2}.p2	BC079861|Mlh3|217716|mutL homolog 3 (E coli)	NM_175337|Mlh3|217716|mutL homolog 3 (E coli)	BC072599|Mlh3|217716|mutL homolog 3 (E coli)	AK132195|Mlh3|217716|mutL homolog 3 (E coli)	AK035887|Mlh3|217716|mutL homolog 3 (E coli)
mm9_v1_chr14_-_25306175_25306259	0.319542	FOX{I1,J2}.p2	BC151168|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	BC151002|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	BC151169|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	AK143315|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	BC053071|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A
mm9_v1_chr7_+_63305516_63305584	0.31799	FOX{I1,J2}.p2	NM_010418|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm9_v1_chr2_-_25316432_25316473	0.317919	FOX{I1,J2}.p2	AK046066|BC029214|227622|cDNA sequence BC029214
mm9_v1_chr11_-_97643692_97643709	0.317914	FOX{I1,J2}.p2	AK012694|Rpl23|65019|ribosomal protein L23	AK018730|Rpl23|65019|ribosomal protein L23	AK150671|Rpl23|65019|ribosomal protein L23	AK002579|Rpl23|65019|ribosomal protein L23	AK010680|Rpl23|65019|ribosomal protein L23
mm9_v1_chr6_-_119798116_119798193	0.317834	FOX{I1,J2}.p2	AK053824|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1	AK035989|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1	AK048990|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1	AF340028|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1	AF340029|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1	NM_053204|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1	NM_178085|Erc1|111173|ELKS/RAB6-interacting/CAST family member 1
mm9_v1_chr18_+_37164856_37165092	0.317683	FOX{I1,J2}.p2	BC079625|Pcdha10|12943|protocadherin alpha 10	AY013757|Pcdha10|12943|protocadherin alpha 10	NM_009961|Pcdha10|12943|protocadherin alpha 10	AB008178|Pcdha10|12943|protocadherin alpha 10
mm9_v1_chr3_+_95985065_95985205	0.317401	FOX{I1,J2}.p2	AK080525|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK144166|Sv2a|64051|synaptic vesicle glycoprotein 2 a	BC046587|Sv2a|64051|synaptic vesicle glycoprotein 2 a	NM_022030|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK080502|Sv2a|64051|synaptic vesicle glycoprotein 2 a	AK028318|Sv2a|64051|synaptic vesicle glycoprotein 2 a
mm9_v1_chr2_-_113669229_113669239	0.317368	FOX{I1,J2}.p2	BC029021|Scg5|20394|secretogranin V
mm9_v1_chr13_+_60703261_60703571	0.316803	FOX{I1,J2}.p2	NM_029653|Dapk1|69635|death associated protein kinase 1	AY245540|Dapk1|69635|death associated protein kinase 1	AY245541|Dapk1|69635|death associated protein kinase 1	BC057317|Dapk1|69635|death associated protein kinase 1	BC060161|Dapk1|69635|death associated protein kinase 1	AK009701|Dapk1|69635|death associated protein kinase 1	AK145922|Dapk1|69635|death associated protein kinase 1	NM_134062|Dapk1|69635|death associated protein kinase 1
mm9_v1_chr13_+_68736315_68736329	0.316357	FOX{I1,J2}.p2	AK005609|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	AK138387|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	NM_027035|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	BC049693|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	BC119515|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene	BC119516|1700001L19Rik|69315|RIKEN cDNA 1700001L19 gene
mm9_v1_chr5_-_141178229_141178331	0.315586	FOX{I1,J2}.p2	AK029333|Iqce|74239|IQ motif containing E	BC059223|Iqce|74239|IQ motif containing E	NM_028833|Iqce|74239|IQ motif containing E
mm9_v1_chr13_-_84204320_84204376	0.312329	FOX{I1,J2}.p2	AK082072|LOC553095|553095|hypothetical LOC553095
mm9_v1_chr17_-_23923018_23923069	0.312082	FOX{I1,J2}.p2	AK019378|Flywch2|76917|FLYWCH family member 2	AK013108|Flywch2|76917|FLYWCH family member 2	NM_029798|Flywch2|76917|FLYWCH family member 2
mm9_v1_chr7_-_4947629_4947709	0.311334	FOX{I1,J2}.p2	AK003337|Zfp579|68490|zinc finger protein 579	AK082494|Zfp579|68490|zinc finger protein 579	AK143550|Zfp579|68490|zinc finger protein 579	NM_026741|Zfp579|68490|zinc finger protein 579	AK148159|Zfp579|68490|zinc finger protein 579
mm9_v1_chr10_+_80614066_80614217	0.310599	FOX{I1,J2}.p2	AK018596|Zbtb7a|16969|zinc finger and BTB domain containing 7a
mm9_v1_chr3_-_146433200_146433208	0.310062	FOX{I1,J2}.p2	NM_001164198|Prkacb|18749|protein kinase, cAMP dependent, catalytic, beta
mm9_v1_chr10_-_14425271_14425365	0.308208	FOX{I1,J2}.p2	AK009227|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	BC026752|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK002611|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	NM_025418|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK003213|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)	AK004323|Vta1|66201|Vps20-associated 1 homolog (S. cerevisiae)
mm9_v1_chr11_-_74710562_74710581	0.307711	FOX{I1,J2}.p2	BC058414|Sgsm2|97761|small G protein signaling modulator 2	BC060163|Sgsm2|97761|small G protein signaling modulator 2	NM_197943|Sgsm2|97761|small G protein signaling modulator 2
mm9_v1_chrX_-_61530170_61530177	0.307267	FOX{I1,J2}.p2	AK053065|Slitrk4|245446|SLIT and NTRK-like family, member 4	NM_178740|Slitrk4|245446|SLIT and NTRK-like family, member 4
mm9_v1_chr2_+_143741050_143741074	0.30687	FOX{I1,J2}.p2	NM_019771|Dstn|56431|destrin
mm9_v1_chr19_+_5460588_5460693	0.306811	FOX{I1,J2}.p2	AK008093|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	AK028029|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	AK008132|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	AK012629|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	BC049284|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	AK019399|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	BC031716|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	AF270700|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein	NM_021438|Fibp|58249|fibroblast growth factor (acidic) intracellular binding protein
mm9_v1_chr18_+_31948788_31948829	0.306347	FOX{I1,J2}.p2	AK011600|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027002|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	AK009093|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	BC004810|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D	NM_027101|Polr2d|69241|polymerase (RNA) II (DNA directed) polypeptide D
mm9_v1_chr5_-_45190857_45190945	0.305249	FOX{I1,J2}.p2	U89487|Ldb2|16826|LIM domain binding 2	U89489|Ldb2|16826|LIM domain binding 2	BC079611|Ldb2|16826|LIM domain binding 2	AK147160|Ldb2|16826|LIM domain binding 2	AK146860|Ldb2|16826|LIM domain binding 2	NM_001077398|Ldb2|16826|LIM domain binding 2	NM_010698|Ldb2|16826|LIM domain binding 2
mm9_v1_chr7_-_148358709_148358768	0.305217	FOX{I1,J2}.p2	AK145173|Rnh1|107702|ribonuclease/angiogenin inhibitor 1	NM_001172100|Rnh1|107702|ribonuclease/angiogenin inhibitor 1
mm9_v1_chr8_+_108692750_108692777	0.304763	FOX{I1,J2}.p2	AK165979|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK165629|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK053899|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK030762|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK046548|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK049478|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK164666|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	NM_178798|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6	AK157379|Slc7a6|330836|solute carrier family 7 (cationic amino acid transporter, y+ system), member 6
mm9_v1_chrX_-_7753020_7753088	0.301668	FOX{I1,J2}.p2	AK166256|Tbc1d25|209815|TBC1 domain family, member 25	AK040932|Tbc1d25|209815|TBC1 domain family, member 25	BC060178|Tbc1d25|209815|TBC1 domain family, member 25
mm9_v1_chr7_+_17545027_17545143	0.3015	FOX{I1,J2}.p2	AK079661|Pnmal1|71691|PNMA-like 1	BC048228|Pnmal1|71691|PNMA-like 1	NM_001007569|Pnmal1|71691|PNMA-like 1
mm9_v1_chr1_+_130140700_130141098	0.301449	FOX{I1,J2}.p2	AK029431|Ubxn4|67812|UBX domain protein 4	BC019795|Ubxn4|67812|UBX domain protein 4	BC012271|Ubxn4|67812|UBX domain protein 4	NM_026390|Ubxn4|67812|UBX domain protein 4	AK011233|Ubxn4|67812|UBX domain protein 4	AK012824|Ubxn4|67812|UBX domain protein 4	AK019371|Ubxn4|67812|UBX domain protein 4	AK148333|Ubxn4|67812|UBX domain protein 4	AK032206|Ubxn4|67812|UBX domain protein 4	AK147795|Ubxn4|67812|UBX domain protein 4	AK075716|Ubxn4|67812|UBX domain protein 4
mm9_v1_chr16_+_91465283_91465348	0.301115	FOX{I1,J2}.p2	AK162627|A930006K02Rik|78433|RIKEN cDNA A930006K02 gene	AK038602|A930006K02Rik|78433|RIKEN cDNA A930006K02 gene
mm9_v1_chr4_+_104829951_104829954	0.30075	FOX{I1,J2}.p2	AK011276|Ppap2b|67916|phosphatidic acid phosphatase type 2B	NM_080555|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr1_-_54495779_54495827	0.300042	FOX{I1,J2}.p2	AK160997|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3	BC141157|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3	AK145040|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3	AK165830|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3	NM_001033194|Gtf3c3|98488|general transcription factor IIIC, polypeptide 3
mm9_v1_chr19_+_8816292_8816349	0.299567	FOX{I1,J2}.p2	AK166087|Stx5a|56389|syntaxin 5A	NM_019829|Stx5a|56389|syntaxin 5A	BC021883|Stx5a|56389|syntaxin 5A
mm9_v1_chr2_-_71205587_71205679	0.298582	FOX{I1,J2}.p2	BC013845|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	BC060505|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK019150|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK083156|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	NM_172436|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK147948|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK030595|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK144958|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12	AK208043|Slc25a12|78830|solute carrier family 25 (mitochondrial carrier, Aralar), member 12
mm9_v1_chr8_-_93657840_93657925	0.297561	FOX{I1,J2}.p2	BC008130|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	Z68183|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	AK146459|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	AK158704|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein	BC034861|Aktip|14339|thymoma viral proto-oncogene 1 interacting protein
mm9_v1_chr2_+_169459145_169459258	0.296292	FOX{I1,J2}.p2	NM_080455|Tshz2|228911|teashirt zinc finger family member 2	BC079550|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chrX_+_7496899_7497045	0.296032	FOX{I1,J2}.p2	AF181560|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	NM_013892|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AF293356|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AK076137|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	AK002969|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor	BC012263|Pcsk1n|30052|proprotein convertase subtilisin/kexin type 1 inhibitor
mm9_v1_chr4_-_142889372_142889476	0.294795	FOX{I1,J2}.p2	NM_010329|Pdpn|14726|podoplanin	AK158855|Pdpn|14726|podoplanin
mm9_v1_chr11_+_109511476_109511595	0.293426	FOX{I1,J2}.p2	AK158562|Prkar1a|19084|protein kinase, cAMP dependent regulatory, type I, alpha
mm9_v1_chr3_+_121747377_121747377	0.293124	FOX{I1,J2}.p2	AF000149|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	BC057853|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4	NM_007378|Abca4|11304|ATP-binding cassette, sub-family A (ABC1), member 4
mm9_v1_chr5_+_139064086_139064121	0.292334	FOX{I1,J2}.p2	AK131909|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	AK131916|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	NM_183025|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	AK039936|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene	BC055299|A430033K04Rik|243308|RIKEN cDNA A430033K04 gene
mm9_v1_chr7_+_129210948_129210953	0.292142	FOX{I1,J2}.p2	AK135258|Ubfd1|28018|ubiquitin family domain containing 1	AK140891|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr8_-_23763885_23763908	0.291391	FOX{I1,J2}.p2	AF513911|Polb|18970|polymerase (DNA directed), beta	BC060998|Polb|18970|polymerase (DNA directed), beta	AK077127|Polb|18970|polymerase (DNA directed), beta	AK151436|Polb|18970|polymerase (DNA directed), beta	AK146745|Polb|18970|polymerase (DNA directed), beta	BC006681|Polb|18970|polymerase (DNA directed), beta	NM_011130|Polb|18970|polymerase (DNA directed), beta
mm9_v1_chr17_+_26389850_26389887	0.291328	FOX{I1,J2}.p2	AK160293|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	NM_025881|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	NM_028190|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like
mm9_v1_chr18_-_43597890_43597947	0.288813	FOX{I1,J2}.p2	AF501324|Dpysl3|22240|dihydropyrimidinase-like 3
mm9_v1_chr1_+_174078258_174078296	0.287761	FOX{I1,J2}.p2	AK167059|Dcaf8|98193|DDB1 and CUL4 associated factor 8	BC023804|Dcaf8|98193|DDB1 and CUL4 associated factor 8	AK209691|Dcaf8|98193|DDB1 and CUL4 associated factor 8	AK098114|Dcaf8|98193|DDB1 and CUL4 associated factor 8
mm9_v1_chr14_+_48092235_48092236	0.287542	FOX{I1,J2}.p2	AK020018|Fbxo34|78938|F-box protein 34	NM_001146085|Fbxo34|78938|F-box protein 34	NM_001146086|Fbxo34|78938|F-box protein 34	NM_030236|Fbxo34|78938|F-box protein 34
mm9_v1_chr4_+_104829867_104829919	0.287138	FOX{I1,J2}.p2	AK159136|Ppap2b|67916|phosphatidic acid phosphatase type 2B
mm9_v1_chr6_+_51473868_51474033	0.286518	FOX{I1,J2}.p2	AK150704|Snx10|71982|sorting nexin 10	AK150999|Snx10|71982|sorting nexin 10	AK151320|Snx10|71982|sorting nexin 10	AK151520|Snx10|71982|sorting nexin 10	AK153127|Snx10|71982|sorting nexin 10	NM_001127349|Snx10|71982|sorting nexin 10	AK152949|Snx10|71982|sorting nexin 10	AK152825|Snx10|71982|sorting nexin 10	AK153356|Snx10|71982|sorting nexin 10	AK010399|Snx10|71982|sorting nexin 10	AK169110|Snx10|71982|sorting nexin 10	BC010334|Snx10|71982|sorting nexin 10	AK042505|Snx10|71982|sorting nexin 10	AK150878|Snx10|71982|sorting nexin 10
mm9_v1_chr11_-_70847078_70847118	0.285447	FOX{I1,J2}.p2	NM_134022|6330403K07Rik|103712|RIKEN cDNA 6330403K07 gene
mm9_v1_chr8_+_73051648_73051650	0.285441	FOX{I1,J2}.p2	AK153000|Fkbp8|14232|FK506 binding protein 8	AK165281|Fkbp8|14232|FK506 binding protein 8	AK146122|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr6_-_143048580_143048646	0.285059	FOX{I1,J2}.p2	AK029825|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	AK021056|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	BC027763|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	AK143732|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	NM_001109688|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	NM_029081|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene	NM_029897|5730419I09Rik|74741|RIKEN cDNA 5730419I09 gene
mm9_v1_chr9_-_66767436_66767566	0.284514	FOX{I1,J2}.p2	AB232601|Rab8b|235442|RAB8B, member RAS oncogene family	AK031251|Rab8b|235442|RAB8B, member RAS oncogene family	BC157974|Rab8b|235442|RAB8B, member RAS oncogene family	AK051218|Rab8b|235442|RAB8B, member RAS oncogene family	AK084650|Rab8b|235442|RAB8B, member RAS oncogene family	AK155621|Rab8b|235442|RAB8B, member RAS oncogene family	BC059208|Rab8b|235442|RAB8B, member RAS oncogene family	NM_173413|Rab8b|235442|RAB8B, member RAS oncogene family
mm9_v1_chr5_+_144670857_144670916	0.284263	FOX{I1,J2}.p2	AK146365|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC139774|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC066110|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	NM_008886|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC058189|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	AK014190|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	AK017847|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	AK034866|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC086637|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC141287|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC022179|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	AK083049|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC083502|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)	BC110684|Pms2|18861|postmeiotic segregation increased 2 (S. cerevisiae)
mm9_v1_chr5_-_129459236_129459360	0.282782	FOX{I1,J2}.p2	NM_001081388|Rimbp2|231760|RIMS binding protein 2	AK044685|Rimbp2|231760|RIMS binding protein 2
mm9_v1_chr5_+_140981515_140981584	0.282582	FOX{I1,J2}.p2	NM_021528|Chst12|59031|carbohydrate sulfotransferase 12	AK142155|Chst12|59031|carbohydrate sulfotransferase 12	BC003201|Chst12|59031|carbohydrate sulfotransferase 12
mm9_v1_chr18_+_37460452_37460636	0.28236	FOX{I1,J2}.p2	AK030570|Pcdhb3|93874|protocadherin beta 3	NM_053128|Pcdhb3|93874|protocadherin beta 3	BC079557|Pcdhb3|93874|protocadherin beta 3	AF326296|Pcdhb3|93874|protocadherin beta 3	AY013785|Pcdhb3|93874|protocadherin beta 3
mm9_v1_chr2_-_152657392_152657404	0.281981	FOX{I1,J2}.p2	AK150028|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr19_+_38339167_38339370	0.280907	FOX{I1,J2}.p2	AK045443|Lgi1|56839|leucine-rich repeat LGI family, member 1	BC066090|Lgi1|56839|leucine-rich repeat LGI family, member 1	NM_020278|Lgi1|56839|leucine-rich repeat LGI family, member 1	AF246818|Lgi1|56839|leucine-rich repeat LGI family, member 1	AK035873|Lgi1|56839|leucine-rich repeat LGI family, member 1	AK031996|Lgi1|56839|leucine-rich repeat LGI family, member 1
mm9_v1_chr4_+_126803305_126803317	0.280588	FOX{I1,J2}.p2	AK156456|Gm12942|100039968|predicted gene 12942
mm9_v1_chr10_+_120471255_120471291	0.280447	FOX{I1,J2}.p2	BC013268|Wif1|24117|Wnt inhibitory factor 1	AF122923|Wif1|24117|Wnt inhibitory factor 1
mm9_v1_chr1_-_141273617_141273676	0.279997	FOX{I1,J2}.p2	AF406641|Crb1|170788|crumbs homolog 1 (Drosophila)	AY450552|Crb1|170788|crumbs homolog 1 (Drosophila)	NM_133239|Crb1|170788|crumbs homolog 1 (Drosophila)	AF492496|Crb1|170788|crumbs homolog 1 (Drosophila)
mm9_v1_chr3_+_95085263_95085296	0.27946	FOX{I1,J2}.p2	
mm9_v1_chr9_-_53418394_53418489	0.279365	FOX{I1,J2}.p2	AK146241|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK032097|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK075593|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	BC024763|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	BC024429|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AJ510150|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK169771|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK081715|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	NM_144784|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1	AK163402|Acat1|110446|acetyl-Coenzyme A acetyltransferase 1
mm9_v1_chr15_-_91403581_91403640	0.279214	FOX{I1,J2}.p2	BC119586|Slc2a13|239606|solute carrier family 2 (facilitated glucose transporter), member 13	BC119587|Slc2a13|239606|solute carrier family 2 (facilitated glucose transporter), member 13	AK041673|Slc2a13|239606|solute carrier family 2 (facilitated glucose transporter), member 13
mm9_v1_chr17_-_35183667_35183733	0.278881	FOX{I1,J2}.p2	NM_001146215|Msh5|17687|mutS homolog 5 (E. coli)	AF107352|Msh5|17687|mutS homolog 5 (E. coli)	AK042083|Msh5|17687|mutS homolog 5 (E. coli)
mm9_v1_chr14_+_31292797_31292864	0.27883	FOX{I1,J2}.p2	BC066173|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	AK047460|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	AK171707|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm9_v1_chr9_-_100407241_100407274	0.27855	FOX{I1,J2}.p2	AK053155|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1	AK054051|Nck1|17973|non-catalytic region of tyrosine kinase adaptor protein 1
mm9_v1_chr2_+_32480924_32481016	0.27728	FOX{I1,J2}.p2	AK089270|Ak1|11636|adenylate kinase 1	NM_001198791|Ak1|11636|adenylate kinase 1	BC014802|Ak1|11636|adenylate kinase 1
mm9_v1_chr7_+_129210847_129210947	0.277156	FOX{I1,J2}.p2	AK017851|Ubfd1|28018|ubiquitin family domain containing 1
mm9_v1_chr18_+_37678006_37678134	0.275003	FOX{I1,J2}.p2	AK043492|Pcdhb22|93893|protocadherin beta 22	NM_053147|Pcdhb22|93893|protocadherin beta 22	BC094239|Pcdhb22|93893|protocadherin beta 22	AF326315|Pcdhb22|93893|protocadherin beta 22	AY013784|Pcdhb22|93893|protocadherin beta 22
mm9_v1_chr4_+_83063621_83063661	0.27484	FOX{I1,J2}.p2	AK049933|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK016168|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK007563|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK010932|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK031870|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK031924|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	BC048713|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	NM_029949|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3	AK019863|Snapc3|77634|small nuclear RNA activating complex, polypeptide 3
mm9_v1_chr16_+_38742365_38742408	0.274789	FOX{I1,J2}.p2	AK050005|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	NM_019804|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK052013|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK053603|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK085368|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	BC031115|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AF142672|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AF158746|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK045602|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK018658|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	BC013492|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
mm9_v1_chr6_+_3448385_3448452	0.274721	FOX{I1,J2}.p2	NM_001167750|Ccdc132|73288|coiled-coil domain containing 132	NM_001167751|Ccdc132|73288|coiled-coil domain containing 132	NM_024260|Ccdc132|73288|coiled-coil domain containing 132	AY254697|Ccdc132|73288|coiled-coil domain containing 132	AK075898|Ccdc132|73288|coiled-coil domain containing 132	AK042031|Ccdc132|73288|coiled-coil domain containing 132	AK018415|Ccdc132|73288|coiled-coil domain containing 132	BC043092|Ccdc132|73288|coiled-coil domain containing 132	AK129458|Ccdc132|73288|coiled-coil domain containing 132	BC036294|Ccdc132|73288|coiled-coil domain containing 132
mm9_v1_chr7_-_106632113_106632218	0.274565	FOX{I1,J2}.p2	AK206775|Rps3|27050|ribosomal protein S3	X76772|Rps3|27050|ribosomal protein S3	BC010721|Rps3|27050|ribosomal protein S3	AK165174|Rps3|27050|ribosomal protein S3	AK167266|Rps3|27050|ribosomal protein S3	AK168845|Rps3|27050|ribosomal protein S3	AK150479|Rps3|27050|ribosomal protein S3	AK003181|Rps3|27050|ribosomal protein S3	AK011655|Rps3|27050|ribosomal protein S3	AK146796|Rps3|27050|ribosomal protein S3	AK012234|Rps3|27050|ribosomal protein S3	AK012314|Rps3|27050|ribosomal protein S3	AK012538|Rps3|27050|ribosomal protein S3	AK088038|Rps3|27050|ribosomal protein S3	AK143603|Rps3|27050|ribosomal protein S3	AK148030|Rps3|27050|ribosomal protein S3	AK160526|Rps3|27050|ribosomal protein S3	AK167210|Rps3|27050|ribosomal protein S3	AK010579|Rps3|27050|ribosomal protein S3	AK010678|Rps3|27050|ribosomal protein S3	AK051243|Rps3|27050|ribosomal protein S3	AK146165|Rps3|27050|ribosomal protein S3	AK159508|Rps3|27050|ribosomal protein S3	AK164077|Rps3|27050|ribosomal protein S3	AK166750|Rps3|27050|ribosomal protein S3	NM_012052|Rps3|27050|ribosomal protein S3
mm9_v1_chr1_+_109407998_109408121	0.274255	FOX{I1,J2}.p2	AK081487|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_001174170|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	NM_011111|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2	AK090049|Serpinb2|18788|serine (or cysteine) peptidase inhibitor, clade B, member 2
mm9_v1_chrX_+_102318792_102318798	0.27412	FOX{I1,J2}.p2	AK209904|Magee1|107528|melanoma antigen, family E, 1
mm9_v1_chr6_+_128349783_128350065	0.273848	FOX{I1,J2}.p2	AJ278170|Nrip2|60345|nuclear receptor interacting protein 2	NM_001162858|Nrip2|60345|nuclear receptor interacting protein 2	NM_021717|Nrip2|60345|nuclear receptor interacting protein 2	AK156526|Nrip2|60345|nuclear receptor interacting protein 2	AK134689|Nrip2|60345|nuclear receptor interacting protein 2	BC115523|Nrip2|60345|nuclear receptor interacting protein 2	BC094230|Nrip2|60345|nuclear receptor interacting protein 2
mm9_v1_chr2_+_80457201_80457422	0.273706	FOX{I1,J2}.p2	AF237618|Dusp19|68082|dual specificity phosphatase 19	NM_024438|Dusp19|68082|dual specificity phosphatase 19	AK010127|Dusp19|68082|dual specificity phosphatase 19	AK077871|Dusp19|68082|dual specificity phosphatase 19	AK170170|Dusp19|68082|dual specificity phosphatase 19	AK018369|Dusp19|68082|dual specificity phosphatase 19	AB051896|Dusp19|68082|dual specificity phosphatase 19	AK049927|Dusp19|68082|dual specificity phosphatase 19	AB038769|Dusp19|68082|dual specificity phosphatase 19	BC021591|Dusp19|68082|dual specificity phosphatase 19	AK083610|Dusp19|68082|dual specificity phosphatase 19
mm9_v1_chr2_+_48669628_48669670	0.273163	FOX{I1,J2}.p2	NM_007396|Acvr2a|11480|activin receptor IIA	AK081022|Acvr2a|11480|activin receptor IIA
mm9_v1_chr3_-_87862384_87862439	0.272979	FOX{I1,J2}.p2	BC058362|Apoa1bp|246703|apolipoprotein A-I binding protein	AJ344092|Apoa1bp|246703|apolipoprotein A-I binding protein	AY566271|Apoa1bp|246703|apolipoprotein A-I binding protein	NM_144897|Apoa1bp|246703|apolipoprotein A-I binding protein	AK159846|Apoa1bp|246703|apolipoprotein A-I binding protein
mm9_v1_chr9_-_98502063_98502097	0.272816	FOX{I1,J2}.p2	BC037653|Mrps22|64655|mitochondrial ribosomal protein S22	BC051198|Mrps22|64655|mitochondrial ribosomal protein S22	AK013925|Mrps22|64655|mitochondrial ribosomal protein S22	AK154600|Mrps22|64655|mitochondrial ribosomal protein S22	NM_025485|Mrps22|64655|mitochondrial ribosomal protein S22
mm9_v1_chr17_+_46818005_46818130	0.272463	FOX{I1,J2}.p2	AK010863|Mea1|17256|male enhanced antigen 1	AK008305|Mea1|17256|male enhanced antigen 1	AK008194|Mea1|17256|male enhanced antigen 1	AK010904|Mea1|17256|male enhanced antigen 1	AK010962|Mea1|17256|male enhanced antigen 1	AK012617|Mea1|17256|male enhanced antigen 1	AK005369|Mea1|17256|male enhanced antigen 1	AK005106|Mea1|17256|male enhanced antigen 1	L10401|Mea1|17256|male enhanced antigen 1	M27938|Mea1|17256|male enhanced antigen 1	NM_010787|Mea1|17256|male enhanced antigen 1	AK011189|Mea1|17256|male enhanced antigen 1	D17341|Mea1|17256|male enhanced antigen 1
mm9_v1_chr10_+_81590757_81590757	0.27197	FOX{I1,J2}.p2	AK137251|AU041133|216177|expressed sequence AU041133	NM_001163064|AU041133|216177|expressed sequence AU041133
mm9_v1_chr19_-_10752469_10752560	0.271115	FOX{I1,J2}.p2	AF240776|Pga5|58803|pepsinogen 5, group I	AK004109|Pga5|58803|pepsinogen 5, group I	AK168924|Pga5|58803|pepsinogen 5, group I	BC119523|Pga5|58803|pepsinogen 5, group I	AK053965|Pga5|58803|pepsinogen 5, group I	NM_021453|Pga5|58803|pepsinogen 5, group I
mm9_v1_chr2_-_154198449_154198468	0.270729	FOX{I1,J2}.p2	AK010081|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK010097|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	NM_025876|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK088517|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1	AK136570|Cdk5rap1|66971|CDK5 regulatory subunit associated protein 1
mm9_v1_chr4_+_101927543_101927649	0.270429	FOX{I1,J2}.p2	NM_019840|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AF208023|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AJ297397|Pde4b|18578|phosphodiesterase 4B, cAMP specific	AK031977|Pde4b|18578|phosphodiesterase 4B, cAMP specific
mm9_v1_chr14_-_52533039_52533074	0.268798	FOX{I1,J2}.p2	AK158900|Ndrg2|29811|N-myc downstream regulated gene 2
mm9_v1_chr13_+_67295437_67295470	0.268033	FOX{I1,J2}.p2	NM_001048204|Zfp455|218311|zinc finger protein 455	AK028336|Zfp455|218311|zinc finger protein 455
mm9_v1_chrX_-_20639111_20639168	0.267783	FOX{I1,J2}.p2	AK155039|Zfp182|319535|zinc finger protein 182	BC063066|Zfp182|319535|zinc finger protein 182	AK045698|Zfp182|319535|zinc finger protein 182	NM_001013387|Zfp182|319535|zinc finger protein 182	NM_001111076|Zfp182|319535|zinc finger protein 182	AK043973|Zfp182|319535|zinc finger protein 182
mm9_v1_chr7_-_125629996_125630002	0.266655	FOX{I1,J2}.p2	AK164927|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2	AK081844|Itpripl2|319622|inositol 1,4,5-triphosphate receptor interacting protein-like 2
mm9_v1_chr13_-_86186317_86186413	0.265768	FOX{I1,J2}.p2	X52940|Cox7c|12867|cytochrome c oxidase, subunit VIIc	AK027989|Cox7c|12867|cytochrome c oxidase, subunit VIIc	AK002494|Cox7c|12867|cytochrome c oxidase, subunit VIIc	AK153444|Cox7c|12867|cytochrome c oxidase, subunit VIIc	BC086792|Cox7c|12867|cytochrome c oxidase, subunit VIIc	BC010772|Cox7c|12867|cytochrome c oxidase, subunit VIIc	AK168077|Cox7c|12867|cytochrome c oxidase, subunit VIIc	AK131871|Cox7c|12867|cytochrome c oxidase, subunit VIIc	NM_007749|Cox7c|12867|cytochrome c oxidase, subunit VIIc
mm9_v1_chr16_-_13984713_13984713	0.265735	FOX{I1,J2}.p2	AK017110|Ifitm7|74482|interferon induced transmembrane protein 7	NM_028968|Ifitm7|74482|interferon induced transmembrane protein 7
mm9_v1_chr8_+_72273591_72273622	0.265582	FOX{I1,J2}.p2	AK007047|1700093C20Rik|76623|RIKEN cDNA 1700093C20 gene
mm9_v1_chr12_-_82586058_82586128	0.265174	FOX{I1,J2}.p2	AK008486|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	BC005675|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK007450|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK007562|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK040003|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK082374|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK087666|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK088794|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	NM_025461|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
mm9_v1_chr1_-_64167574_64167617	0.265174	FOX{I1,J2}.p2	AB221646|Klf7|93691|Kruppel-like factor 7 (ubiquitous)
mm9_v1_chr6_-_30340952_30341009	0.264759	FOX{I1,J2}.p2	BC037445|Zc3hc1|232679|zinc finger, C3HC type 1	AJ537495|Zc3hc1|232679|zinc finger, C3HC type 1	AK151694|Zc3hc1|232679|zinc finger, C3HC type 1	BC050141|Zc3hc1|232679|zinc finger, C3HC type 1	AK088527|Zc3hc1|232679|zinc finger, C3HC type 1	AK167465|Zc3hc1|232679|zinc finger, C3HC type 1	NM_172735|Zc3hc1|232679|zinc finger, C3HC type 1
mm9_v1_chr8_+_63471991_63472061	0.264611	FOX{I1,J2}.p2	AK173292|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AY850065|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	NM_175089|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AK077047|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	AK045202|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC070443|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC157939|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC158009|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1	BC172091|Nek1|18004|NIMA (never in mitosis gene a)-related expressed kinase 1
mm9_v1_chr6_-_137118197_137118219	0.264599	FOX{I1,J2}.p2	AK028025|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	AK133734|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr2_+_132512617_132512719	0.263376	FOX{I1,J2}.p2	BC138171|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene	AK004090|1110034G24Rik|73747|RIKEN cDNA 1110034G24 gene
mm9_v1_chr6_+_47785659_47785733	0.262812	FOX{I1,J2}.p2	AK046208|Zfp398|272347|zinc finger protein 398	NM_027477|Zfp398|272347|zinc finger protein 398	NM_173034|Zfp398|272347|zinc finger protein 398	AK017770|Zfp398|272347|zinc finger protein 398	AK078250|Zfp398|272347|zinc finger protein 398	AK089190|Zfp398|272347|zinc finger protein 398	AK155461|Zfp398|272347|zinc finger protein 398	AK081169|Zfp398|272347|zinc finger protein 398	BC112382|Zfp398|272347|zinc finger protein 398
mm9_v1_chr16_-_87432721_87432850	0.261994	FOX{I1,J2}.p2	AK173009|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK165062|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK036725|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	AK019706|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	BC116272|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	BC116273|Ltn1|78913|listerin E3 ubiquitin protein ligase 1	NM_001081068|Ltn1|78913|listerin E3 ubiquitin protein ligase 1
mm9_v1_chr16_-_28753298_28753313	0.26152	FOX{I1,J2}.p2	AK018774|Fgf12|14167|fibroblast growth factor 12
mm9_v1_chr12_-_46175433_46175475	0.261468	FOX{I1,J2}.p2	NM_144552|Stxbp6|217517|syntaxin binding protein 6 (amisyn)
mm9_v1_chr1_+_180168023_180168042	0.259163	FOX{I1,J2}.p2	AK216786|Pppde1|78825|PPPDE peptidase domain containing 1
mm9_v1_chr3_-_80606500_80606592	0.25887	FOX{I1,J2}.p2	BC066193|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	X57498|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)	BC048248|Gria2|14800|glutamate receptor, ionotropic, AMPA2 (alpha 2)
mm9_v1_chr3_+_95462640_95462703	0.256288	FOX{I1,J2}.p2	NM_008562|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr11_-_77997042_77997098	0.25628	FOX{I1,J2}.p2	BC026656|Rpl23a|268449|ribosomal protein L23A	BC096637|Rpl23a|268449|ribosomal protein L23A	AF452721|Rpl23a|268449|ribosomal protein L23A	BC029892|Rpl23a|268449|ribosomal protein L23A	AK028387|Rpl23a|268449|ribosomal protein L23A	AK152095|Rpl23a|268449|ribosomal protein L23A	BC086884|Rpl23a|268449|ribosomal protein L23A	BC086883|Rpl23a|268449|ribosomal protein L23A	BC125640|Rpl23a|268449|ribosomal protein L23A	BC125642|Rpl23a|268449|ribosomal protein L23A	NM_207523|Rpl23a|268449|ribosomal protein L23A
mm9_v1_chr11_+_70338865_70338909	0.255864	FOX{I1,J2}.p2	AK132042|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	AK078437|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	AK167123|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	AK167227|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6	BC013897|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6
mm9_v1_chr2_-_23904343_23904369	0.255444	FOX{I1,J2}.p2	AB444950|Hnmt|140483|histamine N-methyltransferase	AB444951|Hnmt|140483|histamine N-methyltransferase	AK160131|Hnmt|140483|histamine N-methyltransferase
mm9_v1_chr2_-_79296732_79296799	0.254389	FOX{I1,J2}.p2	BC094611|Neurod1|18012|neurogenic differentiation 1	BC018241|Neurod1|18012|neurogenic differentiation 1	AK018781|Neurod1|18012|neurogenic differentiation 1	AK005073|Neurod1|18012|neurogenic differentiation 1	NM_010894|Neurod1|18012|neurogenic differentiation 1	AK028055|Neurod1|18012|neurogenic differentiation 1
mm9_v1_chr13_-_67182447_67182480	0.253994	FOX{I1,J2}.p2	BC089368|Zfp708|432769|zinc finger protein 708	AK132353|Zfp708|432769|zinc finger protein 708	NM_001012448|Zfp708|432769|zinc finger protein 708
mm9_v1_chr1_+_155587480_155587527	0.253372	FOX{I1,J2}.p2	AK079543|Rgs16|19734|regulator of G-protein signaling 16	NM_011267|Rgs16|19734|regulator of G-protein signaling 16	AK154324|Rgs16|19734|regulator of G-protein signaling 16	U94828|Rgs16|19734|regulator of G-protein signaling 16	U67189|Rgs16|19734|regulator of G-protein signaling 16	BC049968|Rgs16|19734|regulator of G-protein signaling 16	BC010980|Rgs16|19734|regulator of G-protein signaling 16	BC055459|Rgs16|19734|regulator of G-protein signaling 16	U72881|Rgs16|19734|regulator of G-protein signaling 16
mm9_v1_chr14_-_96918064_96918252	0.253092	FOX{I1,J2}.p2	AK031932|Klhl1|93688|kelch-like 1 (Drosophila)	AF252281|Klhl1|93688|kelch-like 1 (Drosophila)	BC094584|Klhl1|93688|kelch-like 1 (Drosophila)	NM_053105|Klhl1|93688|kelch-like 1 (Drosophila)
mm9_v1_chr11_-_103815361_103815405	0.25274	FOX{I1,J2}.p2	BC006627|Nsf|18195|N-ethylmaleimide sensitive fusion protein	NM_008740|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr16_+_32914183_32914232	0.252701	FOX{I1,J2}.p2	AK155550|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	NM_001081255|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK076529|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC151058|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC157924|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	BC172144|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3	AK133482|Lrch3|70144|leucine-rich repeats and calponin homology (CH) domain containing 3
mm9_v1_chr17_-_24670527_24670832	0.250902	FOX{I1,J2}.p2	AB232621|Rab26|328778|RAB26, member RAS oncogene family	BC094931|Rab26|328778|RAB26, member RAS oncogene family	AK043912|Rab26|328778|RAB26, member RAS oncogene family	AK080607|Rab26|328778|RAB26, member RAS oncogene family	NM_177375|Rab26|328778|RAB26, member RAS oncogene family	BC118018|Rab26|328778|RAB26, member RAS oncogene family
mm9_v1_chr13_+_33119282_33119422	0.250494	FOX{I1,J2}.p2	AK005491|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	NM_011452|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	U96705|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	AK167563|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	AK171850|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b	BC064768|Serpinb9b|20706|serine (or cysteine) peptidase inhibitor, clade B, member 9b
mm9_v1_chr17_+_8503966_8504073	0.249204	FOX{I1,J2}.p2	BC091770|Sft2d1|106489|SFT2 domain containing 1	NM_134114|Sft2d1|106489|SFT2 domain containing 1	BC006777|Sft2d1|106489|SFT2 domain containing 1	AK171776|Sft2d1|106489|SFT2 domain containing 1	AK151338|Sft2d1|106489|SFT2 domain containing 1	BC130232|Sft2d1|106489|SFT2 domain containing 1	AK017471|Sft2d1|106489|SFT2 domain containing 1
mm9_v1_chr9_+_109954534_109954609	0.249087	FOX{I1,J2}.p2	AK138416|Mtap4|17758|microtubule-associated protein 4	AK146790|Mtap4|17758|microtubule-associated protein 4	BC042645|Mtap4|17758|microtubule-associated protein 4	AK134996|Mtap4|17758|microtubule-associated protein 4
mm9_v1_chr4_-_134409044_134409108	0.248589	FOX{I1,J2}.p2	AY364165|Tmem57|66146|transmembrane protein 57	BC054355|Tmem57|66146|transmembrane protein 57	BC010714|Tmem57|66146|transmembrane protein 57
mm9_v1_chr3_-_107948968_107949026	0.248266	FOX{I1,J2}.p2	BC041107|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	BC003462|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK168578|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK133749|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK169067|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3	AK167438|Gnai3|14679|guanine nucleotide binding protein (G protein), alpha inhibiting 3
mm9_v1_chr7_-_26460133_26460159	0.246254	FOX{I1,J2}.p2	BC058996|Tmem91|320208|transmembrane protein 91	AK043858|Tmem91|320208|transmembrane protein 91	AK086094|Tmem91|320208|transmembrane protein 91
mm9_v1_chr1_-_52874276_52874420	0.245098	FOX{I1,J2}.p2	BC025072|Inpp1|16329|inositol polyphosphate-1-phosphatase	U27295|Inpp1|16329|inositol polyphosphate-1-phosphatase	AK078382|Inpp1|16329|inositol polyphosphate-1-phosphatase
mm9_v1_chr8_+_3515373_3515441	0.243777	FOX{I1,J2}.p2	AF173829|Pnpla6|50767|patatin-like phospholipase domain containing 6	NM_001122818|Pnpla6|50767|patatin-like phospholipase domain containing 6	NM_015801|Pnpla6|50767|patatin-like phospholipase domain containing 6	AK040720|Pnpla6|50767|patatin-like phospholipase domain containing 6	BC054789|Pnpla6|50767|patatin-like phospholipase domain containing 6	BC056999|Pnpla6|50767|patatin-like phospholipase domain containing 6
mm9_v1_chr14_-_104243379_104243389	0.243148	FOX{I1,J2}.p2	AK083415|Ednrb|13618|endothelin receptor type B	NM_001136061|Ednrb|13618|endothelin receptor type B
mm9_v1_chr12_+_118896501_118896507	0.243074	FOX{I1,J2}.p2	AK083591|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr6_+_21899978_21900058	0.242624	FOX{I1,J2}.p2	AK146145|Ing3|71777|inhibitor of growth family, member 3	AK030364|Ing3|71777|inhibitor of growth family, member 3
mm9_v1_chr12_-_81861527_81861701	0.242448	FOX{I1,J2}.p2	AK147473|Gm1568|380768|predicted gene 1568	BC067044|Gm1568|380768|predicted gene 1568	NM_001008423|Gm1568|380768|predicted gene 1568
mm9_v1_chr11_-_121090513_121090656	0.242	FOX{I1,J2}.p2	BC026616|BC017643|217370|cDNA sequence BC017643	AK158402|BC017643|217370|cDNA sequence BC017643	AK170767|BC017643|217370|cDNA sequence BC017643	BC017643|BC017643|217370|cDNA sequence BC017643	NM_144832|BC017643|217370|cDNA sequence BC017643	AK159453|BC017643|217370|cDNA sequence BC017643	AK168104|BC017643|217370|cDNA sequence BC017643	BC027406|BC017643|217370|cDNA sequence BC017643	AK145884|BC017643|217370|cDNA sequence BC017643
mm9_v1_chrX_-_102265380_102265463	0.241062	FOX{I1,J2}.p2	AK153718|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC019699|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK017459|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085485|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK085098|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084980|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	BC055463|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK080296|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK043766|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK047017|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK084653|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK144934|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK157237|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene	AK164650|5530601H04Rik|71445|RIKEN cDNA 5530601H04 gene
mm9_v1_chr8_-_72149070_72149075	0.241046	FOX{I1,J2}.p2	AK139223|Zfp868|234362|zinc finger protein 868	NM_001045553|Zfp868|234362|zinc finger protein 868
mm9_v1_chr6_-_56873822_56873940	0.240372	FOX{I1,J2}.p2	AK011894|Nt5c3|107569|5'-nucleotidase, cytosolic III	AK011525|Nt5c3|107569|5'-nucleotidase, cytosolic III	NM_026004|Nt5c3|107569|5'-nucleotidase, cytosolic III
mm9_v1_chr9_-_109986879_109987026	0.238828	FOX{I1,J2}.p2	AK193613|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr2_-_91550688_91550738	0.237706	FOX{I1,J2}.p2	BC023673|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK163962|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	BC023712|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	BC033419|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK149672|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK171440|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	BC016669|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	NM_145528|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK154470|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)	AK171206|Atg13|51897|ATG13 autophagy related 13 homolog (S. cerevisiae)
mm9_v1_chr13_+_49777464_49777562	0.236808	FOX{I1,J2}.p2	NM_172015|Iars|105148|isoleucine-tRNA synthetase	BC067029|Iars|105148|isoleucine-tRNA synthetase	AK087992|Iars|105148|isoleucine-tRNA synthetase	AK133856|Iars|105148|isoleucine-tRNA synthetase	AK136132|Iars|105148|isoleucine-tRNA synthetase
mm9_v1_chr15_-_36426543_36426556	0.235456	FOX{I1,J2}.p2	BC035553|Ankrd46|68839|ankyrin repeat domain 46	NM_175134|Ankrd46|68839|ankyrin repeat domain 46
mm9_v1_chr7_+_104991443_104991474	0.235204	FOX{I1,J2}.p2	BC055740|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	BC060157|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	NM_011035|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1	BC079838|Pak1|18479|p21 protein (Cdc42/Rac)-activated kinase 1
mm9_v1_chr4_+_122731563_122731731	0.235038	FOX{I1,J2}.p2	AK188355|Trit1|66966|tRNA isopentenyltransferase 1	AK219389|Trit1|66966|tRNA isopentenyltransferase 1	AK189511|Trit1|66966|tRNA isopentenyltransferase 1
mm9_v1_chr12_+_4776100_4776256	0.23426	FOX{I1,J2}.p2	AK013595|Pfn4|382562|profilin family, member 4	NM_028376|Pfn4|382562|profilin family, member 4	AY495949|Pfn4|382562|profilin family, member 4	BC116888|Pfn4|382562|profilin family, member 4	BC116890|Pfn4|382562|profilin family, member 4
mm9_v1_chr18_+_37663917_37664076	0.233851	FOX{I1,J2}.p2	AK045399|Pcdhb20|93891|protocadherin beta 20	NM_053145|Pcdhb20|93891|protocadherin beta 20	AK046137|Pcdhb20|93891|protocadherin beta 20	AF326313|Pcdhb20|93891|protocadherin beta 20	AK045527|Pcdhb20|93891|protocadherin beta 20	BC031895|Pcdhb20|93891|protocadherin beta 20	AY013782|Pcdhb20|93891|protocadherin beta 20
mm9_v1_chr19_+_26681759_26681957	0.233348	FOX{I1,J2}.p2	AK147322|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr10_+_57718246_57718291	0.232247	FOX{I1,J2}.p2	AK008992|Gcc2|70297|GRIP and coiled-coil domain containing 2	AK011206|Gcc2|70297|GRIP and coiled-coil domain containing 2	AK045701|Gcc2|70297|GRIP and coiled-coil domain containing 2	NM_027375|Gcc2|70297|GRIP and coiled-coil domain containing 2	BC139007|Gcc2|70297|GRIP and coiled-coil domain containing 2	BC145495|Gcc2|70297|GRIP and coiled-coil domain containing 2	BC027339|Gcc2|70297|GRIP and coiled-coil domain containing 2
mm9_v1_chr2_+_88231404_88231405	0.231792	FOX{I1,J2}.p2	BC140109|Olfr1178|258203|olfactory receptor 1178	BC140153|Olfr1178|258203|olfactory receptor 1178	BC143174|Olfr1178|258203|olfactory receptor 1178	NM_001011868|Olfr1178|258203|olfactory receptor 1178
mm9_v1_chr14_+_30781514_30781692	0.231625	FOX{I1,J2}.p2	NM_019979|Selk|80795|selenoprotein K	AK008419|Selk|80795|selenoprotein K	BC038049|Selk|80795|selenoprotein K	AK003206|Selk|80795|selenoprotein K	BC096677|Selk|80795|selenoprotein K	AK007523|Selk|80795|selenoprotein K	AK006674|Selk|80795|selenoprotein K	BC096044|Selk|80795|selenoprotein K
mm9_v1_chr9_+_57385317_57385465	0.231379	FOX{I1,J2}.p2	AK028365|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	NM_001166364|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	NM_175273|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	BC111883|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene	BC112403|2310046O06Rik|78323|RIKEN cDNA 2310046O06 gene
mm9_v1_chr4_-_150026205_150026286	0.230918	FOX{I1,J2}.p2	AK134677|Slc45a1|242773|solute carrier family 45, member 1	BC051188|Slc45a1|242773|solute carrier family 45, member 1	AK134683|Slc45a1|242773|solute carrier family 45, member 1	AK158002|Slc45a1|242773|solute carrier family 45, member 1	AK082651|Slc45a1|242773|solute carrier family 45, member 1	NM_173774|Slc45a1|242773|solute carrier family 45, member 1
mm9_v1_chr12_+_73637330_73637353	0.230701	FOX{I1,J2}.p2	AK076035|1810048J11Rik|67708|RIKEN cDNA 1810048J11 gene	NM_026327|1810048J11Rik|67708|RIKEN cDNA 1810048J11 gene
mm9_v1_chr8_-_74195650_74195661	0.230659	FOX{I1,J2}.p2	NM_001029873|Unc13a|382018|unc-13 homolog A (C. elegans)	AK035920|Unc13a|382018|unc-13 homolog A (C. elegans)
mm9_v1_chr11_-_29925939_29926032	0.230079	FOX{I1,J2}.p2	AK049034|Eml6|237711|echinoderm microtubule associated protein like 6	NM_146016|Eml6|237711|echinoderm microtubule associated protein like 6
mm9_v1_chr10_+_59740430_59740512	0.229468	FOX{I1,J2}.p2	AK159108|Psap|19156|prosaposin	AK148152|Psap|19156|prosaposin	S71616|Psap|19156|prosaposin	AK161313|Psap|19156|prosaposin	AK159457|Psap|19156|prosaposin	AK152819|Psap|19156|prosaposin	AK217017|Psap|19156|prosaposin	AK148150|Psap|19156|prosaposin	AK152319|Psap|19156|prosaposin	AK159221|Psap|19156|prosaposin	AK152408|Psap|19156|prosaposin	AK167198|Psap|19156|prosaposin	AK145607|Psap|19156|prosaposin	AK148545|Psap|19156|prosaposin	AK150331|Psap|19156|prosaposin	AK151234|Psap|19156|prosaposin	AK151525|Psap|19156|prosaposin	AK151529|Psap|19156|prosaposin	AK151852|Psap|19156|prosaposin	AK151907|Psap|19156|prosaposin	AK151943|Psap|19156|prosaposin	AK152134|Psap|19156|prosaposin	AK152505|Psap|19156|prosaposin	AK152557|Psap|19156|prosaposin	AK152605|Psap|19156|prosaposin	AK159414|Psap|19156|prosaposin	AK159589|Psap|19156|prosaposin	AK159728|Psap|19156|prosaposin	AK159862|Psap|19156|prosaposin	AK159936|Psap|19156|prosaposin	AK160019|Psap|19156|prosaposin	AK160049|Psap|19156|prosaposin	AK160877|Psap|19156|prosaposin	AK166879|Psap|19156|prosaposin	AK167099|Psap|19156|prosaposin	AK167252|Psap|19156|prosaposin	AK093881|Psap|19156|prosaposin	AK152355|Psap|19156|prosaposin	AK159333|Psap|19156|prosaposin	AK167418|Psap|19156|prosaposin	AK088369|Psap|19156|prosaposin	AK135637|Psap|19156|prosaposin	AK145802|Psap|19156|prosaposin	AK150645|Psap|19156|prosaposin	AK151034|Psap|19156|prosaposin	AK151230|Psap|19156|prosaposin	AK151251|Psap|19156|prosaposin	AK151875|Psap|19156|prosaposin	AK151891|Psap|19156|prosaposin	AK152126|Psap|19156|prosaposin	AK152280|Psap|19156|prosaposin	AK153404|Psap|19156|prosaposin	AK159164|Psap|19156|prosaposin	AK159167|Psap|19156|prosaposin	AK159198|Psap|19156|prosaposin	AK159244|Psap|19156|prosaposin	AK159266|Psap|19156|prosaposin	AK159341|Psap|19156|prosaposin	AK159384|Psap|19156|prosaposin	AK159451|Psap|19156|prosaposin	AK159487|Psap|19156|prosaposin	AK159492|Psap|19156|prosaposin	AK159510|Psap|19156|prosaposin	AK159528|Psap|19156|prosaposin	AK159530|Psap|19156|prosaposin	AK159604|Psap|19156|prosaposin	AK159634|Psap|19156|prosaposin	AK159638|Psap|19156|prosaposin	AK159657|Psap|19156|prosaposin	AK159664|Psap|19156|prosaposin	AK159685|Psap|19156|prosaposin	AK159692|Psap|19156|prosaposin	AK159709|Psap|19156|prosaposin	AK159720|Psap|19156|prosaposin	AK159840|Psap|19156|prosaposin	AK159861|Psap|19156|prosaposin	AK159877|Psap|19156|prosaposin	AK159910|Psap|19156|prosaposin	AK159915|Psap|19156|prosaposin	AK159982|Psap|19156|prosaposin	AK160015|Psap|19156|prosaposin	AK160021|Psap|19156|prosaposin	AK160024|Psap|19156|prosaposin	AK160046|Psap|19156|prosaposin	AK160073|Psap|19156|prosaposin	AK160108|Psap|19156|prosaposin	AK166700|Psap|19156|prosaposin	AK166707|Psap|19156|prosaposin	AK166811|Psap|19156|prosaposin	AK166849|Psap|19156|prosaposin	AK166909|Psap|19156|prosaposin	AK166920|Psap|19156|prosaposin	AK166946|Psap|19156|prosaposin	AK166959|Psap|19156|prosaposin	AK166984|Psap|19156|prosaposin	AK167014|Psap|19156|prosaposin	AK167025|Psap|19156|prosaposin	AK167073|Psap|19156|prosaposin	AK167108|Psap|19156|prosaposin	AK167111|Psap|19156|prosaposin	AK167147|Psap|19156|prosaposin	AK167213|Psap|19156|prosaposin	AK167237|Psap|19156|prosaposin	BC141089|Psap|19156|prosaposin	BC145359|Psap|19156|prosaposin	U27340|Psap|19156|prosaposin	AK089998|Psap|19156|prosaposin	AK151173|Psap|19156|prosaposin	AK152117|Psap|19156|prosaposin	AK159427|Psap|19156|prosaposin	AK159463|Psap|19156|prosaposin	AK159994|Psap|19156|prosaposin	AK166744|Psap|19156|prosaposin	AK167243|Psap|19156|prosaposin	AK167719|Psap|19156|prosaposin	AK170416|Psap|19156|prosaposin	AK159722|Psap|19156|prosaposin	S36200|Psap|19156|prosaposin
mm9_v1_chr2_-_120070817_120071070	0.229413	FOX{I1,J2}.p2	AK049063|Pla2g4e|329502|phospholipase A2, group IVE	BC137899|Pla2g4e|329502|phospholipase A2, group IVE	BC145020|Pla2g4e|329502|phospholipase A2, group IVE	AB195277|Pla2g4e|329502|phospholipase A2, group IVE	BC066085|Pla2g4e|329502|phospholipase A2, group IVE	NM_177845|Pla2g4e|329502|phospholipase A2, group IVE
mm9_v1_chr15_-_103278889_103278900	0.229299	FOX{I1,J2}.p2	BC048502|BC048502|223927|cDNA sequence BC048502	NM_177631|BC048502|223927|cDNA sequence BC048502	AK131692|BC048502|223927|cDNA sequence BC048502
mm9_v1_chr8_+_73053287_73053425	0.228749	FOX{I1,J2}.p2	BC003739|Fkbp8|14232|FK506 binding protein 8	AY225340|Fkbp8|14232|FK506 binding protein 8	AK216136|Fkbp8|14232|FK506 binding protein 8	AF030635|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr7_+_17659388_17659431	0.226857	FOX{I1,J2}.p2	BC030357|Psg16|26436|pregnancy specific glycoprotein 16	NM_007676|Psg16|26436|pregnancy specific glycoprotein 16	U34272|Psg16|26436|pregnancy specific glycoprotein 16
mm9_v1_chr18_+_37649118_37649272	0.226538	FOX{I1,J2}.p2	AK140341|Pcdhb18|93889|protocadherin beta 18	NM_053143|Pcdhb18|93889|protocadherin beta 18	BC099958|Pcdhb18|93889|protocadherin beta 18	AY013779|Pcdhb18|93889|protocadherin beta 18
mm9_v1_chr3_+_94914936_94915064	0.225462	FOX{I1,J2}.p2	BC043029|Vps72|21427|vacuolar protein sorting 72 (yeast)	NM_009336|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK140284|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK155191|Vps72|21427|vacuolar protein sorting 72 (yeast)	BC004834|Vps72|21427|vacuolar protein sorting 72 (yeast)	D43643|Vps72|21427|vacuolar protein sorting 72 (yeast)	AK179387|Vps72|21427|vacuolar protein sorting 72 (yeast)
mm9_v1_chr3_-_94937886_94937954	0.224299	FOX{I1,J2}.p2	BC028867|Scnm1|69269|sodium channel modifier 1	AK013948|Scnm1|69269|sodium channel modifier 1	NM_001163573|Scnm1|69269|sodium channel modifier 1	NM_027013|Scnm1|69269|sodium channel modifier 1
mm9_v1_chrX_+_101678109_101678127	0.22366	FOX{I1,J2}.p2	NM_001081189|Uprt|331487|uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)
mm9_v1_chr4_+_53644336_53644426	0.223643	FOX{I1,J2}.p2	NM_001195284|Fsd1l|319636|fibronectin type III and SPRY domain containing 1-like	NM_176966|Fsd1l|319636|fibronectin type III and SPRY domain containing 1-like	AK140020|Fsd1l|319636|fibronectin type III and SPRY domain containing 1-like	AK038893|Fsd1l|319636|fibronectin type III and SPRY domain containing 1-like	BC130265|Fsd1l|319636|fibronectin type III and SPRY domain containing 1-like
mm9_v1_chr7_-_134028480_134028480	0.223447	FOX{I1,J2}.p2	NM_001163774|Taok2|381921|TAO kinase 2	NM_001163775|Taok2|381921|TAO kinase 2
mm9_v1_chr7_-_49948087_49948135	0.222909	FOX{I1,J2}.p2	BC068175|Gm5595|434179|predicted gene 5595	NM_001008427|Gm5595|434179|predicted gene 5595
mm9_v1_chrX_+_150266835_150266835	0.221499	FOX{I1,J2}.p2	BC068162|Spin2|278240|spindlin family, member 2	NM_001005370|Spin2|278240|spindlin family, member 2
mm9_v1_chr12_-_82586025_82586042	0.219782	FOX{I1,J2}.p2	BC100533|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)	AK079975|Cox16|66272|COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
mm9_v1_chr16_-_20610796_20610837	0.219544	FOX{I1,J2}.p2	BC031893|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)	AK090067|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)	AK149510|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)	NM_145939|Alg3|208624|asparagine-linked glycosylation 3 homolog (yeast, alpha-1,3-mannosyltransferase)
mm9_v1_chr8_+_96334879_96334940	0.219476	FOX{I1,J2}.p2	BC051989|Gnao1|14681|guanine nucleotide binding protein, alpha O
mm9_v1_chr6_+_54987993_54988082	0.218886	FOX{I1,J2}.p2	NM_180678|Gars|353172|glycyl-tRNA synthetase	AK012758|Gars|353172|glycyl-tRNA synthetase	BC021747|Gars|353172|glycyl-tRNA synthetase	AK146238|Gars|353172|glycyl-tRNA synthetase	AK165857|Gars|353172|glycyl-tRNA synthetase
mm9_v1_chr9_+_3335472_3335500	0.218781	FOX{I1,J2}.p2	AK020197|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK054267|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK081459|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK133489|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK041810|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)	AK033352|Alkbh8|67667|alkB, alkylation repair homolog 8 (E. coli)
mm9_v1_chr11_+_117515548_117515602	0.218548	FOX{I1,J2}.p2	NM_198022|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr11_-_12364886_12365020	0.218225	FOX{I1,J2}.p2	AK147366|Cobl|12808|cordon-bleu	AK147633|Cobl|12808|cordon-bleu	NM_172496|Cobl|12808|cordon-bleu
mm9_v1_chr17_-_85461840_85461859	0.217883	FOX{I1,J2}.p2	AK019367|Prepl|213760|prolyl endopeptidase-like
mm9_v1_chr3_+_63780020_63780051	0.217799	FOX{I1,J2}.p2	AK146654|Gmps|229363|guanine monophosphate synthetase
mm9_v1_chr8_-_74195545_74195647	0.217746	FOX{I1,J2}.p2	AY753536|Unc13a|382018|unc-13 homolog A (C. elegans)	AK010728|Unc13a|382018|unc-13 homolog A (C. elegans)
mm9_v1_chrX_-_91457986_91458033	0.217231	FOX{I1,J2}.p2	AK128949|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK171317|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	BC063755|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	BC139234|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	BC139235|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	NM_012010|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK165866|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK150095|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked	AK146900|Eif2s3x|26905|eukaryotic translation initiation factor 2, subunit 3, structural gene X-linked
mm9_v1_chr2_+_120802698_120802797	0.216593	FOX{I1,J2}.p2	AK161890|Tmem62|96957|transmembrane protein 62	BC070410|Tmem62|96957|transmembrane protein 62	NM_175285|Tmem62|96957|transmembrane protein 62
mm9_v1_chr3_+_94641626_94641643	0.216223	FOX{I1,J2}.p2	BC085188|Pogz|229584|pogo transposable element with ZNF domain	AK035255|Pogz|229584|pogo transposable element with ZNF domain	AK086062|Pogz|229584|pogo transposable element with ZNF domain	AK161889|Pogz|229584|pogo transposable element with ZNF domain	BC139432|Pogz|229584|pogo transposable element with ZNF domain	BC139433|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr5_-_115273443_115273497	0.216083	FOX{I1,J2}.p2	AK148078|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	BC089033|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	BC096574|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	AK012147|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene	NM_181075|2610524H06Rik|330173|RIKEN cDNA 2610524H06 gene
mm9_v1_chr6_+_129483215_129483234	0.215558	FOX{I1,J2}.p2	AK011975|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK159015|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1	AK167500|Gabarapl1|57436|gamma-aminobutyric acid (GABA) A receptor-associated protein-like 1
mm9_v1_chr5_-_100588586_100588606	0.213625	FOX{I1,J2}.p2	AK044570|Tmem150c|231503|transmembrane protein 150C	BC062109|Tmem150c|231503|transmembrane protein 150C
mm9_v1_chr4_+_12067263_12067419	0.212151	FOX{I1,J2}.p2	NM_028226|Rbm12b|72397|RNA binding motif protein 12B	AK030861|Rbm12b|72397|RNA binding motif protein 12B
mm9_v1_chr8_+_28134259_28134401	0.211974	FOX{I1,J2}.p2	BC036333|Erlin2|244373|ER lipid raft associated 2	AK030557|Erlin2|244373|ER lipid raft associated 2	BC038374|Erlin2|244373|ER lipid raft associated 2	NM_153592|Erlin2|244373|ER lipid raft associated 2
mm9_v1_chr2_-_7317513_7317626	0.21169	FOX{I1,J2}.p2	AF090696|Celf2|14007|CUGBP, Elav-like family member 2	NM_001110232|Celf2|14007|CUGBP, Elav-like family member 2
mm9_v1_chr2_+_163051189_163051200	0.211656	FOX{I1,J2}.p2	NM_001098799|Tox2|269389|TOX high mobility group box family member 2
mm9_v1_chr7_+_24866915_24866972	0.211601	FOX{I1,J2}.p2	AK144892|Zfp180|210135|zinc finger protein 180	AK083802|Zfp180|210135|zinc finger protein 180	BC085472|Zfp180|210135|zinc finger protein 180	AK145004|Zfp180|210135|zinc finger protein 180	BC066115|Zfp180|210135|zinc finger protein 180	AK141922|Zfp180|210135|zinc finger protein 180	NM_001045486|Zfp180|210135|zinc finger protein 180	AK154182|Zfp180|210135|zinc finger protein 180	BC063741|Zfp180|210135|zinc finger protein 180
mm9_v1_chr2_-_25110765_25110876	0.210997	FOX{I1,J2}.p2	
mm9_v1_chr19_+_12535268_12535270	0.210457	FOX{I1,J2}.p2	AK030216|Mpeg1|17476|macrophage expressed gene 1	NM_010821|Mpeg1|17476|macrophage expressed gene 1
mm9_v1_chr7_+_28018002_28018114	0.210299	FOX{I1,J2}.p2	NM_133770|Adck4|76889|aarF domain containing kinase 4	AK002619|Adck4|76889|aarF domain containing kinase 4
mm9_v1_chr13_+_120251647_120251660	0.210238	FOX{I1,J2}.p2	BC030738|4833420G17Rik|67392|RIKEN cDNA 4833420G17 gene
mm9_v1_chr6_-_122289630_122289670	0.20996	FOX{I1,J2}.p2	S73882|Phc1|13619|polyhomeotic-like 1 (Drosophila)	S73883|Phc1|13619|polyhomeotic-like 1 (Drosophila)	S73884|Phc1|13619|polyhomeotic-like 1 (Drosophila)	BC046535|Phc1|13619|polyhomeotic-like 1 (Drosophila)	AK167590|Phc1|13619|polyhomeotic-like 1 (Drosophila)
mm9_v1_chrX_+_68617918_68617964	0.209729	FOX{I1,J2}.p2	BC056376|Mtmr1|53332|myotubularin related protein 1	NM_016985|Mtmr1|53332|myotubularin related protein 1	BC057337|Mtmr1|53332|myotubularin related protein 1	AF073997|Mtmr1|53332|myotubularin related protein 1
mm9_v1_chr9_+_120019498_120019516	0.209386	FOX{I1,J2}.p2	AK078385|Slc25a38|208638|solute carrier family 25, member 38	BC010801|Slc25a38|208638|solute carrier family 25, member 38	NM_144793|Slc25a38|208638|solute carrier family 25, member 38
mm9_v1_chr3_-_90237092_90237456	0.209288	FOX{I1,J2}.p2	BC055344|Ints3|229543|integrator complex subunit 3	AK033296|Ints3|229543|integrator complex subunit 3	AK146699|Ints3|229543|integrator complex subunit 3
mm9_v1_chr12_-_52849709_52849723	0.2087	FOX{I1,J2}.p2	AK077185|Hectd1|207304|HECT domain containing 1
mm9_v1_chr13_-_77230519_77230547	0.206054	FOX{I1,J2}.p2	BC083095|Ankrd32|105377|ankyrin repeat domain 32
mm9_v1_chr4_-_134409254_134409295	0.205987	FOX{I1,J2}.p2	AY846873|Tmem57|66146|transmembrane protein 57	AY846874|Tmem57|66146|transmembrane protein 57	NM_025382|Tmem57|66146|transmembrane protein 57
mm9_v1_chr7_-_3629631_3629799	0.205757	FOX{I1,J2}.p2	AK211361|Mboat7|77582|membrane bound O-acyltransferase domain containing 7
mm9_v1_chr4_-_87679175_87679310	0.205493	FOX{I1,J2}.p2	BC021420|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AF372456|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_027326|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr16_+_35770488_35770517	0.204964	FOX{I1,J2}.p2	AK028824|Hspbap1|66667|Hspb associated protein 1	AK138906|Hspbap1|66667|Hspb associated protein 1	AK049404|Hspbap1|66667|Hspb associated protein 1	AK076189|Hspbap1|66667|Hspb associated protein 1	AK017731|Hspbap1|66667|Hspb associated protein 1
mm9_v1_chr14_-_99445271_99445388	0.20425	FOX{I1,J2}.p2	AK168114|Mzt1|76789|mitotic spindle organizing protein 1	AK047481|Mzt1|76789|mitotic spindle organizing protein 1	AK082817|Mzt1|76789|mitotic spindle organizing protein 1	AK087564|Mzt1|76789|mitotic spindle organizing protein 1	AK169036|Mzt1|76789|mitotic spindle organizing protein 1	AK170746|Mzt1|76789|mitotic spindle organizing protein 1	BC038168|Mzt1|76789|mitotic spindle organizing protein 1	AK165605|Mzt1|76789|mitotic spindle organizing protein 1	BC098481|Mzt1|76789|mitotic spindle organizing protein 1	AK150268|Mzt1|76789|mitotic spindle organizing protein 1	AK151232|Mzt1|76789|mitotic spindle organizing protein 1	AK151358|Mzt1|76789|mitotic spindle organizing protein 1	AK151819|Mzt1|76789|mitotic spindle organizing protein 1	AK010788|Mzt1|76789|mitotic spindle organizing protein 1	BC117005|Mzt1|76789|mitotic spindle organizing protein 1	BC117007|Mzt1|76789|mitotic spindle organizing protein 1	AK160911|Mzt1|76789|mitotic spindle organizing protein 1	NM_175245|Mzt1|76789|mitotic spindle organizing protein 1
mm9_v1_chr7_+_86040793_86040943	0.203882	FOX{I1,J2}.p2	AK031972|Aen|68048|apoptosis enhancing nuclease	NM_001162939|Aen|68048|apoptosis enhancing nuclease	NM_026531|Aen|68048|apoptosis enhancing nuclease	AK165708|Aen|68048|apoptosis enhancing nuclease	AK012555|Aen|68048|apoptosis enhancing nuclease	AK090056|Aen|68048|apoptosis enhancing nuclease	AK166806|Aen|68048|apoptosis enhancing nuclease	AK167042|Aen|68048|apoptosis enhancing nuclease	AK076421|Aen|68048|apoptosis enhancing nuclease	AK167658|Aen|68048|apoptosis enhancing nuclease	AK017644|Aen|68048|apoptosis enhancing nuclease	AK089090|Aen|68048|apoptosis enhancing nuclease	BC022614|Aen|68048|apoptosis enhancing nuclease
mm9_v1_chr9_-_53822931_53822996	0.203818	FOX{I1,J2}.p2	BC049160|Elmod1|270162|ELMO domain containing 1	AK029207|Elmod1|270162|ELMO domain containing 1
mm9_v1_chr6_+_86959829_86959929	0.203797	FOX{I1,J2}.p2	AK145558|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	NM_001170591|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	NM_020045|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AK081950|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AK002244|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AK003730|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AJ132616|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	BC018355|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)	AY335195|Nfu1|56748|NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae)
mm9_v1_chr7_+_110368156_110368233	0.203001	FOX{I1,J2}.p2	BC141016|Olfr594|258246|olfactory receptor 594	NM_207143|Olfr594|258246|olfactory receptor 594
mm9_v1_chr13_+_97158248_97158334	0.20272	FOX{I1,J2}.p2	AK150656|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	NM_026173|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK012926|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC037631|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC027118|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK089013|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	AK004769|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)	BC016527|Poc5|67463|POC5 centriolar protein homolog (Chlamydomonas)
mm9_v1_chr8_+_74967757_74967859	0.202713	FOX{I1,J2}.p2	AK133815|1700030K09Rik|72254|RIKEN cDNA 1700030K09 gene	NM_028170|1700030K09Rik|72254|RIKEN cDNA 1700030K09 gene	BC008558|1700030K09Rik|72254|RIKEN cDNA 1700030K09 gene	AK089918|1700030K09Rik|72254|RIKEN cDNA 1700030K09 gene
mm9_v1_chr5_-_23122181_23122418	0.202187	FOX{I1,J2}.p2	AB006036|Srpk2|20817|serine/arginine-rich protein specific kinase 2	BC020178|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK136861|Srpk2|20817|serine/arginine-rich protein specific kinase 2	AK169580|Srpk2|20817|serine/arginine-rich protein specific kinase 2	NM_009274|Srpk2|20817|serine/arginine-rich protein specific kinase 2
mm9_v1_chr6_-_30341017_30341032	0.201996	FOX{I1,J2}.p2	AK168071|Zc3hc1|232679|zinc finger, C3HC type 1	AK146228|Zc3hc1|232679|zinc finger, C3HC type 1	AK167992|Zc3hc1|232679|zinc finger, C3HC type 1
mm9_v1_chr11_+_3584631_3584687	0.20105	FOX{I1,J2}.p2	AK018377|Morc2a|74522|microrchidia 2A
mm9_v1_chr7_-_34981664_34981695	0.200917	FOX{I1,J2}.p2	BC115797|Pdcd2l|68079|programmed cell death 2-like	AK077948|Pdcd2l|68079|programmed cell death 2-like	NM_026549|Pdcd2l|68079|programmed cell death 2-like	AK151495|Pdcd2l|68079|programmed cell death 2-like	AK003339|Pdcd2l|68079|programmed cell death 2-like	AK154811|Pdcd2l|68079|programmed cell death 2-like
mm9_v1_chr9_-_20619426_20619525	0.200349	FOX{I1,J2}.p2	BC024367|Col5a3|53867|collagen, type V, alpha 3	BC138417|Col5a3|53867|collagen, type V, alpha 3	BC138419|Col5a3|53867|collagen, type V, alpha 3	BC145269|Col5a3|53867|collagen, type V, alpha 3	AF176645|Col5a3|53867|collagen, type V, alpha 3	NM_016919|Col5a3|53867|collagen, type V, alpha 3	AB040491|Col5a3|53867|collagen, type V, alpha 3
mm9_v1_chr5_+_145965427_145965536	0.199553	FOX{I1,J2}.p2	NM_001167944|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	NM_016683|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK173086|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	AK019484|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5	BC060248|Zkscan5|22757|zinc finger with KRAB and SCAN domains 5
mm9_v1_chr11_+_80022584_80022586	0.19946	FOX{I1,J2}.p2	AK032096|Rhot1|59040|ras homolog gene family, member T1	AK054472|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr1_+_154802198_154802230	0.198812	FOX{I1,J2}.p2	BC089007|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2	NM_175460|Nmnat2|226518|nicotinamide nucleotide adenylyltransferase 2
mm9_v1_chr11_+_4886860_4887033	0.19875	FOX{I1,J2}.p2	AK155892|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	NM_007454|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	AK165747|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	AK170376|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	AK159273|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	AK160042|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	Y07919|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	BC008513|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit	AK180383|Ap1b1|11764|adaptor protein complex AP-1, beta 1 subunit
mm9_v1_chr8_+_19784580_19784661	0.198704	FOX{I1,J2}.p2	AK088897|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene
mm9_v1_chr4_+_134479583_134479637	0.198486	FOX{I1,J2}.p2	BC056986|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed	BC046231|D4Wsu53e|27981|DNA segment, Chr 4, Wayne State University 53, expressed
mm9_v1_chr17_+_85025803_85025818	0.197843	FOX{I1,J2}.p2	AK160259|Dync2li1|213575|dynein cytoplasmic 2 light intermediate chain 1
mm9_v1_chr6_+_121014481_121014613	0.197812	FOX{I1,J2}.p2	AK085340|Gm4651|100043793|predicted gene 4651
mm9_v1_chr14_-_109313333_109313374	0.197802	FOX{I1,J2}.p2	AK173296|Slitrk1|76965|SLIT and NTRK-like family, member 1
mm9_v1_chr5_-_38952934_38952968	0.196932	FOX{I1,J2}.p2	AK004644|Wdr1|22388|WD repeat domain 1
mm9_v1_chr17_+_70774131_70774133	0.196838	FOX{I1,J2}.p2	NM_027712|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	NM_177639|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1	BC062120|Dlgap1|224997|discs, large (Drosophila) homolog-associated protein 1
mm9_v1_chr7_+_31993360_31993375	0.195861	FOX{I1,J2}.p2	
mm9_v1_chr1_+_97230610_97230736	0.195287	FOX{I1,J2}.p2	AK152164|Fam174a|67698|family with sequence similarity 174, member A
mm9_v1_chr11_-_120410992_120411040	0.195024	FOX{I1,J2}.p2	BC025536|Fam195b|192173|family with sequence similarity 195, member B	AK147780|Fam195b|192173|family with sequence similarity 195, member B	NM_001033231|Fam195b|192173|family with sequence similarity 195, member B
mm9_v1_chrX_-_6765768_6765839	0.19493	FOX{I1,J2}.p2	AK142227|Clcn5|12728|chloride channel 5	AK145763|Clcn5|12728|chloride channel 5	BC036347|Clcn5|12728|chloride channel 5	AK052990|Clcn5|12728|chloride channel 5	AF134117|Clcn5|12728|chloride channel 5	NM_016691|Clcn5|12728|chloride channel 5
mm9_v1_chr5_-_149862867_149863025	0.194671	FOX{I1,J2}.p2	BC110667|Hmgb1|15289|high mobility group box 1	AK037928|Hmgb1|15289|high mobility group box 1
mm9_v1_chr10_+_116018336_116018351	0.194536	FOX{I1,J2}.p2	AK077360|5330438D12Rik|327824|RIKEN cDNA 5330438D12 gene
mm9_v1_chr13_+_73604668_73604698	0.194425	FOX{I1,J2}.p2	AK155286|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK081865|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK046079|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK046507|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK170723|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK171582|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK132379|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1	AK169190|Lpcat1|210992|lysophosphatidylcholine acyltransferase 1
mm9_v1_chr2_+_76244578_76244594	0.194352	FOX{I1,J2}.p2	AK044411|Osbpl6|99031|oxysterol binding protein-like 6	NM_145525|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr7_+_50469408_50469408	0.193841	FOX{I1,J2}.p2	EU599041|EU599041|100170401|expressed sequence EU599041	EU599042|EU599041|100170401|expressed sequence EU599041	NM_001177525|EU599041|100170401|expressed sequence EU599041
mm9_v1_chr16_+_17331507_17331521	0.193464	FOX{I1,J2}.p2	BC089610|Serpind1|15160|serine (or cysteine) peptidase inhibitor, clade D, member 1
mm9_v1_chr10_+_87663839_87663973	0.193265	FOX{I1,J2}.p2	AK013835|Ccdc53|67282|coiled-coil domain containing 53	AK158822|Ccdc53|67282|coiled-coil domain containing 53	NM_001122960|Ccdc53|67282|coiled-coil domain containing 53	NM_026070|Ccdc53|67282|coiled-coil domain containing 53	NM_027487|Ccdc53|67282|coiled-coil domain containing 53	AK017732|Ccdc53|67282|coiled-coil domain containing 53	AK004206|Ccdc53|67282|coiled-coil domain containing 53	AK028599|Ccdc53|67282|coiled-coil domain containing 53	AK009358|Ccdc53|67282|coiled-coil domain containing 53	BC029256|Ccdc53|67282|coiled-coil domain containing 53
mm9_v1_chr9_-_99469275_99469317	0.192931	FOX{I1,J2}.p2	BC038866|Armc8|74125|armadillo repeat containing 8	AK004793|Armc8|74125|armadillo repeat containing 8	NM_001166138|Armc8|74125|armadillo repeat containing 8	NM_028768|Armc8|74125|armadillo repeat containing 8
mm9_v1_chr14_+_78304045_78304240	0.191995	FOX{I1,J2}.p2	AK136055|Epsti1|108670|epithelial stromal interaction 1 (breast)	NM_029495|Epsti1|108670|epithelial stromal interaction 1 (breast)	NM_178825|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK135710|Epsti1|108670|epithelial stromal interaction 1 (breast)	AY239224|Epsti1|108670|epithelial stromal interaction 1 (breast)	BC021821|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK077376|Epsti1|108670|epithelial stromal interaction 1 (breast)	BC020120|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK017174|Epsti1|108670|epithelial stromal interaction 1 (breast)	AY239223|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK030289|Epsti1|108670|epithelial stromal interaction 1 (breast)	AK077223|Epsti1|108670|epithelial stromal interaction 1 (breast)
mm9_v1_chr3_-_127111869_127111953	0.191332	FOX{I1,J2}.p2	AK047866|Ank2|109676|ankyrin 2, brain	AK084070|Ank2|109676|ankyrin 2, brain	AK036179|Ank2|109676|ankyrin 2, brain	AK166115|Ank2|109676|ankyrin 2, brain	AK046947|Ank2|109676|ankyrin 2, brain
mm9_v1_chr6_-_115788429_115788481	0.191075	FOX{I1,J2}.p2	BC060267|BC060267|212516|cDNA sequence BC060267	NM_001110506|BC060267|212516|cDNA sequence BC060267
mm9_v1_chr5_+_121039024_121039042	0.190949	FOX{I1,J2}.p2	AK076996|Iqcd|75732|IQ motif containing D	NM_029408|Iqcd|75732|IQ motif containing D	AK017032|Iqcd|75732|IQ motif containing D	BC125429|Iqcd|75732|IQ motif containing D	BC137644|Iqcd|75732|IQ motif containing D	BC100441|Iqcd|75732|IQ motif containing D
mm9_v1_chr1_+_7079000_7079035	0.190784	FOX{I1,J2}.p2	NM_183028|Pcmtd1|319263|protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
mm9_v1_chrX_+_7274259_7274353	0.190588	FOX{I1,J2}.p2	NM_173747|Gpkow|209416|G patch domain and KOW motifs	AK017864|Gpkow|209416|G patch domain and KOW motifs	AK144167|Gpkow|209416|G patch domain and KOW motifs	AK028433|Gpkow|209416|G patch domain and KOW motifs	BC092224|Gpkow|209416|G patch domain and KOW motifs
mm9_v1_chr5_-_131783942_131783957	0.190302	FOX{I1,J2}.p2	AK087726|Wbscr17|212996|Williams-Beuren syndrome chromosome region 17 homolog (human)
mm9_v1_chr18_+_37854011_37854154	0.190221	FOX{I1,J2}.p2	AK043161|Pcdhga5|93713|protocadherin gamma subfamily A, 5	BC057404|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AK043491|Pcdhga5|93713|protocadherin gamma subfamily A, 5	AY013799|Pcdhga5|93713|protocadherin gamma subfamily A, 5	NM_033588|Pcdhga5|93713|protocadherin gamma subfamily A, 5
mm9_v1_chr11_-_120092784_120092898	0.189662	FOX{I1,J2}.p2	AK034741|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene	AK162948|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene	AK013668|2900052L18Rik|76835|RIKEN cDNA 2900052L18 gene
mm9_v1_chr5_+_29895742_29895846	0.189522	FOX{I1,J2}.p2	AK046056|Ube3c|100763|ubiquitin protein ligase E3C	NM_133907|Ube3c|100763|ubiquitin protein ligase E3C	AK122187|Ube3c|100763|ubiquitin protein ligase E3C
mm9_v1_chr10_+_74500008_74500039	0.188866	FOX{I1,J2}.p2	AK046113|Rab36|76877|RAB36, member RAS oncogene family
mm9_v1_chr1_+_88199795_88199833	0.188818	FOX{I1,J2}.p2	NM_145222|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	AK080081|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7	AF502429|B3gnt7|227327|UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 7
mm9_v1_chr15_-_79762947_79763095	0.18743	FOX{I1,J2}.p2	AB221539|Cbx7|52609|chromobox homolog 7	AK045714|Cbx7|52609|chromobox homolog 7	NM_144811|Cbx7|52609|chromobox homolog 7
mm9_v1_chr18_+_23573977_23574064	0.186816	FOX{I1,J2}.p2	AF143543|Dtna|13527|dystrobrevin alpha	AK019477|Dtna|13527|dystrobrevin alpha	AK003829|Dtna|13527|dystrobrevin alpha	AF143542|Dtna|13527|dystrobrevin alpha	AF143544|Dtna|13527|dystrobrevin alpha
mm9_v1_chr6_-_113841295_113841343	0.186767	FOX{I1,J2}.p2	AK147357|Atp2b2|11941|ATPase, Ca++ transporting, plasma membrane 2
mm9_v1_chr19_+_26822892_26822948	0.186589	FOX{I1,J2}.p2	NM_026003|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2	AK011935|Smarca2|67155|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2
mm9_v1_chr15_-_77137425_77137482	0.186581	FOX{I1,J2}.p2	AK139555|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_001110827|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_053104|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2	NM_175387|Rbfox2|93686|RNA binding protein, fox-1 homolog (C. elegans) 2
mm9_v1_chr7_-_99889932_99889979	0.186537	FOX{I1,J2}.p2	AK014157|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK051992|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK018467|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK019505|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK084903|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK084084|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene	AK145781|4632427E13Rik|666737|RIKEN cDNA 4632427E13 gene
mm9_v1_chr3_-_152645206_152645210	0.186377	FOX{I1,J2}.p2	AK042683|St6galnac5|26938|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
mm9_v1_chr8_+_34763709_34763709	0.185213	FOX{I1,J2}.p2	BC056357|Gsr|14782|glutathione reductase	BC057325|Gsr|14782|glutathione reductase	NM_010344|Gsr|14782|glutathione reductase
mm9_v1_chr9_+_57408729_57408820	0.184743	FOX{I1,J2}.p2	AK003080|Scamp2|24044|secretory carrier membrane protein 2	AK161002|Scamp2|24044|secretory carrier membrane protein 2	NM_022813|Scamp2|24044|secretory carrier membrane protein 2	AF295402|Scamp2|24044|secretory carrier membrane protein 2	AK171766|Scamp2|24044|secretory carrier membrane protein 2	BC003452|Scamp2|24044|secretory carrier membrane protein 2	BC014751|Scamp2|24044|secretory carrier membrane protein 2
mm9_v1_chr2_-_21126852_21126991	0.18366	FOX{I1,J2}.p2	BC132425|Enkur|71233|enkurin, TRPC channel interacting protein	BC132451|Enkur|71233|enkurin, TRPC channel interacting protein	BC099519|Enkur|71233|enkurin, TRPC channel interacting protein	AY454124|Enkur|71233|enkurin, TRPC channel interacting protein	AK017056|Enkur|71233|enkurin, TRPC channel interacting protein	NM_027728|Enkur|71233|enkurin, TRPC channel interacting protein
mm9_v1_chr1_-_172145380_172145502	0.183655	FOX{I1,J2}.p2	Y10725|Uhmk1|16589|U2AF homology motif (UHM) kinase 1
mm9_v1_chr11_+_49016828_49017024	0.183263	FOX{I1,J2}.p2	AK088060|Zfp62|22720|zinc finger protein 62	AK157730|Zfp62|22720|zinc finger protein 62	AK167091|Zfp62|22720|zinc finger protein 62	AK028351|Zfp62|22720|zinc finger protein 62	AK048619|Zfp62|22720|zinc finger protein 62	NM_001024846|Zfp62|22720|zinc finger protein 62	NM_009562|Zfp62|22720|zinc finger protein 62	AK154767|Zfp62|22720|zinc finger protein 62	AK079774|Zfp62|22720|zinc finger protein 62	AK165654|Zfp62|22720|zinc finger protein 62
mm9_v1_chr14_+_28290299_28290355	0.183153	FOX{I1,J2}.p2	AK173099|D14Abb1e|218850|DNA segment, Chr 14, Abbott 1 expressed
mm9_v1_chr10_+_126437764_126437859	0.182674	FOX{I1,J2}.p2	NM_009635|Avil|11567|advillin	AF059486|Avil|11567|advillin	AK154851|Avil|11567|advillin	AK155900|Avil|11567|advillin	AK170878|Avil|11567|advillin	AK171324|Avil|11567|advillin	AK171319|Avil|11567|advillin	AF041448|Avil|11567|advillin	BC119222|Avil|11567|advillin	BC120545|Avil|11567|advillin
mm9_v1_chr2_+_155970003_155970079	0.1821	FOX{I1,J2}.p2	AY028425|Romo1|67067|reactive oxygen species modulator 1	NM_025946|Romo1|67067|reactive oxygen species modulator 1
mm9_v1_chr9_+_3532302_3532353	0.182063	FOX{I1,J2}.p2	NM_001033322|Gucy1a2|234889|guanylate cyclase 1, soluble, alpha 2
mm9_v1_chr10_+_111409750_111409849	0.182043	FOX{I1,J2}.p2	NM_178610|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK012108|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK045526|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK036447|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK146926|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC089510|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK011972|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK030560|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK032472|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK041854|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	AK168675|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)	BC094236|Krr1|52705|KRR1, small subunit (SSU) processome component, homolog (yeast)
mm9_v1_chr17_-_86544514_86544514	0.181931	FOX{I1,J2}.p2	AK021298|Srbd1|78586|S1 RNA binding domain 1	NM_030133|Srbd1|78586|S1 RNA binding domain 1
mm9_v1_chr11_-_103815317_103815332	0.181545	FOX{I1,J2}.p2	AK085086|Nsf|18195|N-ethylmaleimide sensitive fusion protein	U10120|Nsf|18195|N-ethylmaleimide sensitive fusion protein
mm9_v1_chr15_+_76369247_76369393	0.181302	FOX{I1,J2}.p2	AK161447|Gpr172b|52710|G protein-coupled receptor 172B	AK142597|Gpr172b|52710|G protein-coupled receptor 172B	AK080449|Gpr172b|52710|G protein-coupled receptor 172B	BC016264|Gpr172b|52710|G protein-coupled receptor 172B	AK152335|Gpr172b|52710|G protein-coupled receptor 172B	AK029579|Gpr172b|52710|G protein-coupled receptor 172B	NM_029643|Gpr172b|52710|G protein-coupled receptor 172B	AK008081|Gpr172b|52710|G protein-coupled receptor 172B	AK032015|Gpr172b|52710|G protein-coupled receptor 172B
mm9_v1_chr15_+_79501284_79501317	0.180442	FOX{I1,J2}.p2	AK008133|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK009868|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	NM_172609|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK150787|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK013471|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK049442|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK150360|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK152843|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	AK167803|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)	BC056920|Tomm22|223696|translocase of outer mitochondrial membrane 22 homolog (yeast)
mm9_v1_chr15_+_3220766_3220979	0.180402	FOX{I1,J2}.p2	NM_001042613|Sepp1|20363|selenoprotein P, plasma, 1	NM_001042614|Sepp1|20363|selenoprotein P, plasma, 1	AK188386|Sepp1|20363|selenoprotein P, plasma, 1	NM_009155|Sepp1|20363|selenoprotein P, plasma, 1
mm9_v1_chr11_+_71564481_71564540	0.179941	FOX{I1,J2}.p2	BC030477|Wscd1|216881|WSC domain containing 1
mm9_v1_chr5_+_118426721_118426771	0.179339	FOX{I1,J2}.p2	BC021871|Fbxo21|231670|F-box protein 21
mm9_v1_chr10_-_77472501_77472567	0.179081	FOX{I1,J2}.p2	NM_008826|Pfkl|18641|phosphofructokinase, liver, B-type
mm9_v1_chr11_+_62389048_62389081	0.178471	FOX{I1,J2}.p2	AK134052|Trpv2|22368|transient receptor potential cation channel, subfamily V, member 2
mm9_v1_chr2_+_111323505_111323588	0.178071	FOX{I1,J2}.p2	BC137761|Olfr1289|258399|olfactory receptor 1289	BC120736|Olfr1289|258399|olfactory receptor 1289	NM_146404|Olfr1289|258399|olfactory receptor 1289
mm9_v1_chr5_-_21371421_21371421	0.177362	FOX{I1,J2}.p2	AF529192|Slc26a5|80979|solute carrier family 26, member 5	NM_030727|Slc26a5|80979|solute carrier family 26, member 5
mm9_v1_chr6_+_113187821_113187914	0.177226	FOX{I1,J2}.p2	NM_026849|Mtmr14|97287|myotubularin related protein 14	AK161445|Mtmr14|97287|myotubularin related protein 14	BC018294|Mtmr14|97287|myotubularin related protein 14	AK034867|Mtmr14|97287|myotubularin related protein 14
mm9_v1_chr5_+_135526788_135526925	0.17699	FOX{I1,J2}.p2	
mm9_v1_chr10_+_10869224_10869321	0.17674	FOX{I1,J2}.p2	AK082160|Shprh|268281|SNF2 histone linker PHD RING helicase	AK053448|Shprh|268281|SNF2 histone linker PHD RING helicase	NM_001077707|Shprh|268281|SNF2 histone linker PHD RING helicase	NM_172937|Shprh|268281|SNF2 histone linker PHD RING helicase	BC055003|Shprh|268281|SNF2 histone linker PHD RING helicase	AK048265|Shprh|268281|SNF2 histone linker PHD RING helicase	AK085285|Shprh|268281|SNF2 histone linker PHD RING helicase	AK011809|Shprh|268281|SNF2 histone linker PHD RING helicase	AY162264|Shprh|268281|SNF2 histone linker PHD RING helicase	AY162266|Shprh|268281|SNF2 histone linker PHD RING helicase
mm9_v1_chr7_-_137689460_137689480	0.176283	FOX{I1,J2}.p2	AK179472|Nsmce4a|67872|non-SMC element 4 homolog A (S. cerevisiae)
mm9_v1_chr19_-_34953810_34953944	0.176015	FOX{I1,J2}.p2	AK017345|Pank1|75735|pantothenate kinase 1	AF347700|Pank1|75735|pantothenate kinase 1	NM_001114339|Pank1|75735|pantothenate kinase 1
mm9_v1_chr11_-_62190182_62190262	0.175661	FOX{I1,J2}.p2	AB093281|Ncor1|20185|nuclear receptor co-repressor 1
mm9_v1_chr12_+_11272691_11272706	0.175247	FOX{I1,J2}.p2	BC090630|Smc6|67241|structural maintenance of chromosomes 6	NM_025695|Smc6|67241|structural maintenance of chromosomes 6
mm9_v1_chr10_+_98453513_98453709	0.175033	FOX{I1,J2}.p2	AK053569|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1	AK042547|Atp2b1|67972|ATPase, Ca++ transporting, plasma membrane 1
mm9_v1_chr6_-_49213980_49214011	0.174601	FOX{I1,J2}.p2	AK171788|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK172413|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	BC057448|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	BC058764|Tra2a|101214|transformer 2 alpha homolog (Drosophila)	AK076606|Tra2a|101214|transformer 2 alpha homolog (Drosophila)
mm9_v1_chr18_+_37906739_37906841	0.17443	FOX{I1,J2}.p2	AY013793|Pcdhga10|93722|protocadherin gamma subfamily A, 10	NM_033593|Pcdhga10|93722|protocadherin gamma subfamily A, 10
mm9_v1_chr4_+_53024724_53024848	0.174143	FOX{I1,J2}.p2	AK012480|Nipsnap3b|66536|nipsnap homolog 3B (C. elegans)	NM_025623|Nipsnap3b|66536|nipsnap homolog 3B (C. elegans)	AK004458|Nipsnap3b|66536|nipsnap homolog 3B (C. elegans)	AK008786|Nipsnap3b|66536|nipsnap homolog 3B (C. elegans)	AF353623|Nipsnap3b|66536|nipsnap homolog 3B (C. elegans)	BC019505|Nipsnap3b|66536|nipsnap homolog 3B (C. elegans)
mm9_v1_chr15_-_3253525_3253525	0.172556	FOX{I1,J2}.p2	NM_001166063|Ccdc152|100039139|coiled-coil domain containing 152
mm9_v1_chr7_-_121706466_121706500	0.172177	FOX{I1,J2}.p2	AK050453|Cyp2r1|244209|cytochrome P450, family 2, subfamily r, polypeptide 1	BC108962|Cyp2r1|244209|cytochrome P450, family 2, subfamily r, polypeptide 1	AY323818|Cyp2r1|244209|cytochrome P450, family 2, subfamily r, polypeptide 1	BC108961|Cyp2r1|244209|cytochrome P450, family 2, subfamily r, polypeptide 1	NM_177382|Cyp2r1|244209|cytochrome P450, family 2, subfamily r, polypeptide 1
mm9_v1_chr17_-_36034316_36034327	0.171961	FOX{I1,J2}.p2	NM_001033630|2310061I04Rik|69662|RIKEN cDNA 2310061I04 gene
mm9_v1_chr16_+_8470854_8470905	0.171912	FOX{I1,J2}.p2	AK136614|BC024814|239706|cDNA sequence BC024814	AK089212|BC024814|239706|cDNA sequence BC024814	BC024814|BC024814|239706|cDNA sequence BC024814	NM_146247|BC024814|239706|cDNA sequence BC024814
mm9_v1_chr9_+_107479247_107479317	0.170415	FOX{I1,J2}.p2	AK028942|Hyal1|15586|hyaluronoglucosaminidase 1	NM_008317|Hyal1|15586|hyaluronoglucosaminidase 1	BC021636|Hyal1|15586|hyaluronoglucosaminidase 1	AF011567|Hyal1|15586|hyaluronoglucosaminidase 1
mm9_v1_chr12_+_30512469_30512567	0.170143	FOX{I1,J2}.p2	AK049967|Myt1l|17933|myelin transcription factor 1-like
mm9_v1_chr3_-_88262982_88263022	0.170135	FOX{I1,J2}.p2	NM_001163490|Sema4a|20351|sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4A
mm9_v1_chr6_-_112897259_112897274	0.169803	FOX{I1,J2}.p2	AK045508|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	AK051262|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3	NM_080448|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3
mm9_v1_chr9_+_57437238_57437346	0.169516	FOX{I1,J2}.p2	NM_027895|Ulk3|71742|unc-51-like kinase 3 (C. elegans)	BC037093|Ulk3|71742|unc-51-like kinase 3 (C. elegans)	AK004783|Ulk3|71742|unc-51-like kinase 3 (C. elegans)	BC151153|Ulk3|71742|unc-51-like kinase 3 (C. elegans)	AK154642|Ulk3|71742|unc-51-like kinase 3 (C. elegans)
mm9_v1_chr2_+_22478131_22478182	0.169158	FOX{I1,J2}.p2	BC018380|Gad2|14417|glutamic acid decarboxylase 2	AK136834|Gad2|14417|glutamic acid decarboxylase 2	AF326549|Gad2|14417|glutamic acid decarboxylase 2	AF326550|Gad2|14417|glutamic acid decarboxylase 2
mm9_v1_chr13_+_55794441_55794492	0.167694	FOX{I1,J2}.p2	AK088693|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene	BC051430|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene	NM_181278|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr12_+_39506844_39506916	0.167583	FOX{I1,J2}.p2	NM_007960|Etv1|14009|ets variant gene 1	L10426|Etv1|14009|ets variant gene 1	AK144713|Etv1|14009|ets variant gene 1	BC005645|Etv1|14009|ets variant gene 1
mm9_v1_chr5_-_92777875_92777914	0.167387	FOX{I1,J2}.p2	AF227743|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	M33266|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	NM_021274|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	BC030067|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	BC057150|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK150380|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK156907|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK172540|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	M86829|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK144279|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK150765|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151210|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151248|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151415|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK151534|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK152568|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK152814|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK153181|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157130|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157139|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157589|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK157678|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK146144|Cxcl10|15945|chemokine (C-X-C motif) ligand 10	AK152234|Cxcl10|15945|chemokine (C-X-C motif) ligand 10
mm9_v1_chr5_+_117827904_117828056	0.167213	FOX{I1,J2}.p2	AK195234|Wsb2|59043|WD repeat and SOCS box-containing 2	AK198504|Wsb2|59043|WD repeat and SOCS box-containing 2	AK206996|Wsb2|59043|WD repeat and SOCS box-containing 2	AK210681|Wsb2|59043|WD repeat and SOCS box-containing 2
mm9_v1_chr14_+_31362306_31362551	0.167193	FOX{I1,J2}.p2	AK166763|Tkt|21881|transketolase	AK167084|Tkt|21881|transketolase	AK140965|Tkt|21881|transketolase	AK030446|Tkt|21881|transketolase	NM_009388|Tkt|21881|transketolase	AK152460|Tkt|21881|transketolase	AK002627|Tkt|21881|transketolase	AK012794|Tkt|21881|transketolase	AK145677|Tkt|21881|transketolase	AK150139|Tkt|21881|transketolase	AK150901|Tkt|21881|transketolase	AK159922|Tkt|21881|transketolase	U05809|Tkt|21881|transketolase	AK050793|Tkt|21881|transketolase	AK146157|Tkt|21881|transketolase	AK144146|Tkt|21881|transketolase	AK150769|Tkt|21881|transketolase	AK150844|Tkt|21881|transketolase	AK150856|Tkt|21881|transketolase	AK152245|Tkt|21881|transketolase	AK151916|Tkt|21881|transketolase	AK151969|Tkt|21881|transketolase	AK152886|Tkt|21881|transketolase	BC055336|Tkt|21881|transketolase	AK216935|Tkt|21881|transketolase	AK181952|Tkt|21881|transketolase
mm9_v1_chr9_-_110892114_110892227	0.166858	FOX{I1,J2}.p2	AY562227|Rtp3|235636|receptor transporter protein 3	BC150678|Rtp3|235636|receptor transporter protein 3	AJ428064|Rtp3|235636|receptor transporter protein 3	BC112903|Rtp3|235636|receptor transporter protein 3	NM_153100|Rtp3|235636|receptor transporter protein 3
mm9_v1_chr3_-_95161071_95161127	0.166778	FOX{I1,J2}.p2	AK135833|Setdb1|84505|SET domain, bifurcated 1	BC079537|Setdb1|84505|SET domain, bifurcated 1	AF091628|Setdb1|84505|SET domain, bifurcated 1	AF546078|Setdb1|84505|SET domain, bifurcated 1	AY091600|Setdb1|84505|SET domain, bifurcated 1	BC060173|Setdb1|84505|SET domain, bifurcated 1	AK132202|Setdb1|84505|SET domain, bifurcated 1	NM_001163641|Setdb1|84505|SET domain, bifurcated 1	NM_001163642|Setdb1|84505|SET domain, bifurcated 1	NM_018877|Setdb1|84505|SET domain, bifurcated 1
mm9_v1_chr1_-_170085342_170085390	0.166274	FOX{I1,J2}.p2	AK083616|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr13_+_104968913_104969020	0.16544	FOX{I1,J2}.p2	AK042070|Trim23|81003|tripartite motif-containing 23	AK018217|Trim23|81003|tripartite motif-containing 23	AK029533|Trim23|81003|tripartite motif-containing 23	AK030843|Trim23|81003|tripartite motif-containing 23	AK036210|Trim23|81003|tripartite motif-containing 23	AK088922|Trim23|81003|tripartite motif-containing 23	BC056390|Trim23|81003|tripartite motif-containing 23	BC059017|Trim23|81003|tripartite motif-containing 23
mm9_v1_chr5_+_118426774_118426787	0.165277	FOX{I1,J2}.p2	AK049723|Fbxo21|231670|F-box protein 21	NM_145564|Fbxo21|231670|F-box protein 21	AK076521|Fbxo21|231670|F-box protein 21
mm9_v1_chr9_-_108363229_108363406	0.16526	FOX{I1,J2}.p2	AK157991|Klhdc8b|78267|kelch domain containing 8B	AK087143|Klhdc8b|78267|kelch domain containing 8B	AK154428|Klhdc8b|78267|kelch domain containing 8B
mm9_v1_chr6_+_141472906_141473070	0.165042	FOX{I1,J2}.p2	AK045782|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_001177772|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	NM_021471|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK048926|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AK161010|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	BC078456|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1	AY007379|Slco1c1|58807|solute carrier organic anion transporter family, member 1c1
mm9_v1_chr18_-_67404904_67404933	0.164703	FOX{I1,J2}.p2	AK158446|Mppe1|225651|metallophosphoesterase 1
mm9_v1_chr18_-_43847367_43847426	0.164671	FOX{I1,J2}.p2	AK133750|Jakmip2|76217|janus kinase and microtubule interacting protein 2	NM_001163637|Jakmip2|76217|janus kinase and microtubule interacting protein 2
mm9_v1_chr2_-_32630929_32631152	0.164646	FOX{I1,J2}.p2	AK133273|Ttc16|338348|tetratricopeptide repeat domain 16	AK164721|Ttc16|338348|tetratricopeptide repeat domain 16	AK089384|Ttc16|338348|tetratricopeptide repeat domain 16
mm9_v1_chr12_-_103196366_103196464	0.164466	FOX{I1,J2}.p2	AF537188|Atxn3|110616|ataxin 3	AK030842|Atxn3|110616|ataxin 3	AK008675|Atxn3|110616|ataxin 3	BC087880|Atxn3|110616|ataxin 3	BC049743|Atxn3|110616|ataxin 3	NM_001167914|Atxn3|110616|ataxin 3	NM_029705|Atxn3|110616|ataxin 3
mm9_v1_chr5_+_122804377_122804463	0.164388	FOX{I1,J2}.p2	AK150330|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	AK008248|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	AK004103|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	AF193794|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	NM_019780|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	BC005663|Vps29|56433|vacuolar protein sorting 29 (S. pombe)	AK036426|Vps29|56433|vacuolar protein sorting 29 (S. pombe)
mm9_v1_chr17_-_26081875_26081875	0.163974	FOX{I1,J2}.p2	AK143822|Nhlrc4|621239|NHL repeat containing 4	NM_001039038|Nhlrc4|621239|NHL repeat containing 4
mm9_v1_chr11_-_69485800_69485832	0.163894	FOX{I1,J2}.p2	BC099392|Eif4a1|13681|eukaryotic translation initiation factor 4A1	BC012282|Eif4a1|13681|eukaryotic translation initiation factor 4A1	BC049915|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169030|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166527|Eif4a1|13681|eukaryotic translation initiation factor 4A1	X03039|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK159643|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167205|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK168697|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169156|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK011529|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK077429|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK135752|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK135994|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK144850|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK146464|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166439|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167003|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167083|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167988|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK168780|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169023|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169057|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK169279|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166572|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK088124|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK145375|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK145508|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK146424|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK152694|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK162017|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK166674|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167196|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK167906|Eif4a1|13681|eukaryotic translation initiation factor 4A1	AK010644|Eif4a1|13681|eukaryotic translation initiation factor 4A1
mm9_v1_chr4_-_134409149_134409155	0.162442	FOX{I1,J2}.p2	AK038972|Tmem57|66146|transmembrane protein 57	BC054769|Tmem57|66146|transmembrane protein 57
mm9_v1_chr5_-_110698814_110698873	0.161707	FOX{I1,J2}.p2	BC052179|Pgam5|72542|phosphoglycerate mutase family member 5	BC021317|Pgam5|72542|phosphoglycerate mutase family member 5	AK162266|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chr1_+_83156336_83156343	0.161301	FOX{I1,J2}.p2	AK016977|Wdr69|71227|WD repeat domain 69	BC049704|Wdr69|71227|WD repeat domain 69	BC144994|Wdr69|71227|WD repeat domain 69	BC145995|Wdr69|71227|WD repeat domain 69	NM_027725|Wdr69|71227|WD repeat domain 69	AK016201|Wdr69|71227|WD repeat domain 69
mm9_v1_chr2_+_69058005_69058054	0.160718	FOX{I1,J2}.p2	AK148450|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	Z47787|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	BC111905|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	AK148465|G6pc2|14378|glucose-6-phosphatase, catalytic, 2	NM_021331|G6pc2|14378|glucose-6-phosphatase, catalytic, 2
mm9_v1_chr2_+_181501718_181501871	0.160633	FOX{I1,J2}.p2	AK165786|Myt1|17932|myelin transcription factor 1	NM_001171616|Myt1|17932|myelin transcription factor 1	NM_008665|Myt1|17932|myelin transcription factor 1	AB082378|Myt1|17932|myelin transcription factor 1	AK082994|Myt1|17932|myelin transcription factor 1
mm9_v1_chr6_-_134837738_134837876	0.160203	FOX{I1,J2}.p2	U46923|Gpr19|14760|G protein-coupled receptor 19	BC050187|Gpr19|14760|G protein-coupled receptor 19	NM_001167697|Gpr19|14760|G protein-coupled receptor 19	NM_001167699|Gpr19|14760|G protein-coupled receptor 19	NM_008157|Gpr19|14760|G protein-coupled receptor 19
mm9_v1_chr18_+_38611212_38611226	0.160043	FOX{I1,J2}.p2	
mm9_v1_chrX_-_101866402_101866402	0.159991	FOX{I1,J2}.p2	AK132304|Zdhhc15|108672|zinc finger, DHHC domain containing 15	NM_175358|Zdhhc15|108672|zinc finger, DHHC domain containing 15
mm9_v1_chr9_-_15084310_15084404	0.159819	FOX{I1,J2}.p2	BC020185|Med17|234959|mediator complex subunit 17	NM_144933|Med17|234959|mediator complex subunit 17	AK033151|Med17|234959|mediator complex subunit 17	AK142033|Med17|234959|mediator complex subunit 17	AK038451|Med17|234959|mediator complex subunit 17	AK049112|Med17|234959|mediator complex subunit 17	AK151377|Med17|234959|mediator complex subunit 17
mm9_v1_chr9_-_97011440_97011575	0.159737	FOX{I1,J2}.p2	BC008171|Slc25a36|192287|solute carrier family 25, member 36	AK078779|Slc25a36|192287|solute carrier family 25, member 36	NM_138756|Slc25a36|192287|solute carrier family 25, member 36	AK042075|Slc25a36|192287|solute carrier family 25, member 36	AK053646|Slc25a36|192287|solute carrier family 25, member 36
mm9_v1_chr5_+_106039499_106039528	0.15968	FOX{I1,J2}.p2	AK081556|Lrrc8c|100604|leucine rich repeat containing 8 family, member C
mm9_v1_chrX_-_147451785_147451868	0.15955	FOX{I1,J2}.p2	BC079653|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	BC057033|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	BC020354|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	NM_001168600|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like	NM_198110|Gnl3l|237107|guanine nucleotide binding protein-like 3 (nucleolar)-like
mm9_v1_chr3_+_136333670_136333672	0.159379	FOX{I1,J2}.p2	AK150393|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr7_+_109358966_109359049	0.159303	FOX{I1,J2}.p2	AK134287|Pgap2|233575|post-GPI attachment to proteins 2
mm9_v1_chr9_-_110959702_110959793	0.159154	FOX{I1,J2}.p2	AF030185|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	AK145946|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	AK007808|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	NM_017466|Ccrl2|54199|chemokine (C-C motif) receptor-like 2
mm9_v1_chr2_+_24132788_24133018	0.159087	FOX{I1,J2}.p2	AK008977|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK009741|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK076547|Il1f5|54450|interleukin 1 family, member 5 (delta)	NM_019451|Il1f5|54450|interleukin 1 family, member 5 (delta)	AK010020|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF200495|Il1f5|54450|interleukin 1 family, member 5 (delta)	AJ250429|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132600|Il1f5|54450|interleukin 1 family, member 5 (delta)	BC132602|Il1f5|54450|interleukin 1 family, member 5 (delta)	AF230378|Il1f5|54450|interleukin 1 family, member 5 (delta)
mm9_v1_chr5_-_124053691_124053818	0.15866	FOX{I1,J2}.p2	AK030387|Clip1|56430|CAP-GLY domain containing linker protein 1
mm9_v1_chr19_+_17468498_17468584	0.158574	FOX{I1,J2}.p2	NM_019437|Rfk|54391|riboflavin kinase	AK002806|Rfk|54391|riboflavin kinase
mm9_v1_chr4_-_115747606_115747639	0.157825	FOX{I1,J2}.p2	AK003539|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	BC011388|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK019085|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK003266|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK088185|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK054005|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein
mm9_v1_chr4_+_19935389_19935537	0.157495	FOX{I1,J2}.p2	BC026882|Ttpa|50500|tocopherol (alpha) transfer protein
mm9_v1_chr1_-_16646922_16646999	0.157384	FOX{I1,J2}.p2	AK012909|Tceb1|67923|transcription elongation factor B (SIII), polypeptide 1	AK039746|Tceb1|67923|transcription elongation factor B (SIII), polypeptide 1	BC009104|Tceb1|67923|transcription elongation factor B (SIII), polypeptide 1	NM_026456|Tceb1|67923|transcription elongation factor B (SIII), polypeptide 1	AK013089|Tceb1|67923|transcription elongation factor B (SIII), polypeptide 1	AK011958|Tceb1|67923|transcription elongation factor B (SIII), polypeptide 1
mm9_v1_chr2_+_164323024_164323043	0.157231	FOX{I1,J2}.p2	NM_133779|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK049171|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK049990|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK019717|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK090020|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK155057|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK153462|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK153464|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK044499|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	AK157226|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T
mm9_v1_chr1_-_99024782_99024879	0.157082	FOX{I1,J2}.p2	BC139066|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	BC139067|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK132668|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK161249|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK016647|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	AK029505|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1	NM_028942|Slco6c1|74441|solute carrier organic anion transporter family, member 6c1
mm9_v1_chr13_+_76718869_76718988	0.156859	FOX{I1,J2}.p2	AK154322|Mctp1|78771|multiple C2 domains, transmembrane 1	AK144765|Mctp1|78771|multiple C2 domains, transmembrane 1
mm9_v1_chr8_+_73282270_73282383	0.15645	FOX{I1,J2}.p2	
mm9_v1_chr7_+_25689359_25689364	0.156316	FOX{I1,J2}.p2	NM_001130152|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr6_-_38249209_38249350	0.156195	FOX{I1,J2}.p2	AK084475|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK045287|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	AK051064|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	NM_172467|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138180|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like	BC138181|Zc3hav1l|209032|zinc finger CCCH-type, antiviral 1-like
mm9_v1_chr9_-_85637765_85637765	0.15592	FOX{I1,J2}.p2	NM_001081282|Ibtk|108837|inhibitor of Bruton agammaglobulinemia tyrosine kinase
mm9_v1_chr7_+_128061297_128061331	0.155586	FOX{I1,J2}.p2	AK012184|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	AK144721|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	AK146279|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	AK159723|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	BC037637|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E	BC028924|Polr3e|26939|polymerase (RNA) III (DNA directed) polypeptide E
mm9_v1_chr11_+_20991321_20991416	0.155444	FOX{I1,J2}.p2	AK151660|Peli1|67245|pellino 1	AK152900|Peli1|67245|pellino 1	AK152997|Peli1|67245|pellino 1	AK153372|Peli1|67245|pellino 1	NM_023324|Peli1|67245|pellino 1	AK167525|Peli1|67245|pellino 1	BC026695|Peli1|67245|pellino 1
mm9_v1_chr1_-_132558108_132558210	0.154966	FOX{I1,J2}.p2	AK136735|C4bp|12269|complement component 4 binding protein	AK162345|C4bp|12269|complement component 4 binding protein	AB094486|C4bp|12269|complement component 4 binding protein	AK149477|C4bp|12269|complement component 4 binding protein	BC012257|C4bp|12269|complement component 4 binding protein	AB094485|C4bp|12269|complement component 4 binding protein	NM_007576|C4bp|12269|complement component 4 binding protein	AK050344|C4bp|12269|complement component 4 binding protein	AK149468|C4bp|12269|complement component 4 binding protein	M17122|C4bp|12269|complement component 4 binding protein
mm9_v1_chr18_+_37901716_37901894	0.154625	FOX{I1,J2}.p2	BC054556|Pcdhgb6|93703|protocadherin gamma subfamily B, 6	NM_033578|Pcdhgb6|93703|protocadherin gamma subfamily B, 6	AY013808|Pcdhgb6|93703|protocadherin gamma subfamily B, 6
mm9_v1_chr11_-_61680770_61680775	0.154416	FOX{I1,J2}.p2	AK138613|A530017D24Rik|103880|RIKEN cDNA A530017D24 gene
mm9_v1_chr19_-_27463677_27463827	0.154361	FOX{I1,J2}.p2	AK004416|D19Bwg1357e|52874|DNA segment, Chr 19, Brigham & Women's Genetics 1357 expressed
mm9_v1_chr18_+_48206298_48206369	0.153975	FOX{I1,J2}.p2	
mm9_v1_chr19_+_6984613_6984666	0.153899	FOX{I1,J2}.p2	AK002791|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	AK003292|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)	BC019418|Trmt112|67674|tRNA methyltransferase 11-2 homolog (S. cerevisiae)
mm9_v1_chr9_+_20016650_20016744	0.153108	FOX{I1,J2}.p2	NM_146903|Olfr871|258905|olfactory receptor 871	BC119201|Olfr871|258905|olfactory receptor 871	BC119203|Olfr871|258905|olfactory receptor 871
mm9_v1_chr8_-_23276871_23276906	0.152937	FOX{I1,J2}.p2	AF099066|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3	BC005411|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3	NM_011848|Nek3|23954|NIMA (never in mitosis gene a)-related expressed kinase 3
mm9_v1_chr3_-_115955629_115955694	0.151933	FOX{I1,J2}.p2	BC157981|Gpr88|64378|G-protein coupled receptor 88	BC051941|Gpr88|64378|G-protein coupled receptor 88
mm9_v1_chr13_+_32893989_32894122	0.151628	FOX{I1,J2}.p2	AB056151|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr7_-_48755259_48755259	0.151432	FOX{I1,J2}.p2	AK164198|AW146154|101835|expressed sequence AW146154	NM_001033530|AW146154|101835|expressed sequence AW146154
mm9_v1_chr12_+_75065534_75065545	0.150914	FOX{I1,J2}.p2	BC030456|Snapc1|75627|small nuclear RNA activating complex, polypeptide 1
mm9_v1_chr2_+_91490332_91490401	0.150853	FOX{I1,J2}.p2	AK079048|Arhgap1|228359|Rho GTPase activating protein 1	BC089306|Arhgap1|228359|Rho GTPase activating protein 1	BC006592|Arhgap1|228359|Rho GTPase activating protein 1	AK085554|Arhgap1|228359|Rho GTPase activating protein 1
mm9_v1_chr13_+_14722494_14722518	0.150671	FOX{I1,J2}.p2	AK169400|AW209491|105351|expressed sequence AW209491	NM_001104646|AW209491|105351|expressed sequence AW209491
mm9_v1_chr2_+_58607580_58607600	0.150555	FOX{I1,J2}.p2	AY152393|Upp2|76654|uridine phosphorylase 2	NM_029692|Upp2|76654|uridine phosphorylase 2	AK149444|Upp2|76654|uridine phosphorylase 2
mm9_v1_chr15_-_79664645_79664773	0.150514	FOX{I1,J2}.p2	BC011199|Cbx6|494448|chromobox homolog 6	BC048240|Cbx6|494448|chromobox homolog 6	AK004679|Cbx6|494448|chromobox homolog 6	AK090253|Cbx6|494448|chromobox homolog 6	AK146048|Cbx6|494448|chromobox homolog 6	AK146103|Cbx6|494448|chromobox homolog 6	AY394488|Npcd|504193|neuronal pentraxin chromo domain	AY394489|Npcd|504193|neuronal pentraxin chromo domain	AY395907|Npcd|504193|neuronal pentraxin chromo domain	AK035250|Cbx6|494448|chromobox homolog 6	NM_001013360|Npcd|504193|neuronal pentraxin chromo domain	NM_001013362|Npcd|504193|neuronal pentraxin chromo domain	NM_028763|Cbx6|494448|chromobox homolog 6
mm9_v1_chr17_+_41097513_41097693	0.150246	FOX{I1,J2}.p2	AK029425|Mut|17850|methylmalonyl-Coenzyme A mutase	AK012766|Mut|17850|methylmalonyl-Coenzyme A mutase
mm9_v1_chr10_-_80630456_80630508	0.150028	FOX{I1,J2}.p2	AK131903|Pias4|59004|protein inhibitor of activated STAT 4	AK076943|Pias4|59004|protein inhibitor of activated STAT 4	BC025159|Pias4|59004|protein inhibitor of activated STAT 4	NM_021501|Pias4|59004|protein inhibitor of activated STAT 4	AK131822|Pias4|59004|protein inhibitor of activated STAT 4	AK148066|Pias4|59004|protein inhibitor of activated STAT 4	AK147813|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr18_+_56732519_56732526	0.148747	FOX{I1,J2}.p2	NM_019996|Phax|56698|phosphorylated adaptor for RNA export
mm9_v1_chr4_+_49644923_49645030	0.148598	FOX{I1,J2}.p2	NM_001163263|Rnf20|109331|ring finger protein 20	NM_182999|Rnf20|109331|ring finger protein 20	AK053783|Rnf20|109331|ring finger protein 20	AK085436|Rnf20|109331|ring finger protein 20	AK139883|Rnf20|109331|ring finger protein 20	AK048862|Rnf20|109331|ring finger protein 20	AK051278|Rnf20|109331|ring finger protein 20	BC052482|Rnf20|109331|ring finger protein 20	AK087860|Rnf20|109331|ring finger protein 20	AK220492|Rnf20|109331|ring finger protein 20	AK082529|Rnf20|109331|ring finger protein 20
mm9_v1_chr5_-_49280703_49280795	0.14859	FOX{I1,J2}.p2	AF453243|Kcnip4|80334|Kv channel interacting protein 4	AK165773|Kcnip4|80334|Kv channel interacting protein 4	AK049662|Kcnip4|80334|Kv channel interacting protein 4	DQ148503|Kcnip4|80334|Kv channel interacting protein 4	AK039048|Kcnip4|80334|Kv channel interacting protein 4	NM_030265|Kcnip4|80334|Kv channel interacting protein 4
mm9_v1_chr2_+_169458802_169458807	0.148515	FOX{I1,J2}.p2	BC079877|Tshz2|228911|teashirt zinc finger family member 2
mm9_v1_chr17_+_47506145_47506145	0.148356	FOX{I1,J2}.p2	BC048912|Mrps10|64657|mitochondrial ribosomal protein S10	NM_183086|Mrps10|64657|mitochondrial ribosomal protein S10
mm9_v1_chr6_-_137118238_137118241	0.148077	FOX{I1,J2}.p2	NM_001164212|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor	NM_001164214|Rerg|232441|RAS-like, estrogen-regulated, growth-inhibitor
mm9_v1_chr6_-_82889694_82889743	0.147555	FOX{I1,J2}.p2	AB021291|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC057048|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC090625|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK047067|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC094567|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK035993|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	AK143196|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	NM_001113481|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	NM_011350|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
mm9_v1_chr2_-_38142866_38142913	0.147109	FOX{I1,J2}.p2	BC027786|Dennd1a|227801|DENN/MADD domain containing 1A	AK137530|Dennd1a|227801|DENN/MADD domain containing 1A	BC023016|Dennd1a|227801|DENN/MADD domain containing 1A	NM_146122|Dennd1a|227801|DENN/MADD domain containing 1A
mm9_v1_chr13_+_50513207_50513274	0.146804	FOX{I1,J2}.p2	AK135553|Fbxw17|109082|F-box and WD-40 domain protein 17	BC040428|Fbxw17|109082|F-box and WD-40 domain protein 17	NM_175401|Fbxw17|109082|F-box and WD-40 domain protein 17	AK155157|Fbxw17|109082|F-box and WD-40 domain protein 17
mm9_v1_chr18_-_56722155_56722190	0.146645	FOX{I1,J2}.p2	AK189373|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr11_+_116295406_116295422	0.146602	FOX{I1,J2}.p2	AK144901|Fam100b|319370|family with sequence similarity 100, member B	NM_176902|Fam100b|319370|family with sequence similarity 100, member B
mm9_v1_chr2_-_39081799_39081884	0.146566	FOX{I1,J2}.p2	AK002764|Ppp6c|67857|protein phosphatase 6, catalytic subunit	AK009104|Ppp6c|67857|protein phosphatase 6, catalytic subunit	NM_024209|Ppp6c|67857|protein phosphatase 6, catalytic subunit	BC002223|Ppp6c|67857|protein phosphatase 6, catalytic subunit
mm9_v1_chr2_-_32279522_32279542	0.146375	FOX{I1,J2}.p2	BC022114|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25	BC019978|Slc25a25|227731|solute carrier family 25 (mitochondrial carrier, phosphate carrier), member 25
mm9_v1_chr5_+_136293975_136293975	0.146256	FOX{I1,J2}.p2	BC058385|Srrm3|58212|serine/arginine repetitive matrix 3	NM_021403|Srrm3|58212|serine/arginine repetitive matrix 3
mm9_v1_chr5_-_130285076_130285140	0.146226	FOX{I1,J2}.p2	BC002251|Psph|100678|phosphoserine phosphatase	AK168048|Psph|100678|phosphoserine phosphatase
mm9_v1_chr2_-_156817751_156817861	0.145926	FOX{I1,J2}.p2	AK002272|Ndrg3|29812|N-myc downstream regulated gene 3	AB033922|Ndrg3|29812|N-myc downstream regulated gene 3	BC018504|Ndrg3|29812|N-myc downstream regulated gene 3	AK036277|Ndrg3|29812|N-myc downstream regulated gene 3	AK037487|Ndrg3|29812|N-myc downstream regulated gene 3	AK029378|Ndrg3|29812|N-myc downstream regulated gene 3	AK004689|Ndrg3|29812|N-myc downstream regulated gene 3	AK154927|Ndrg3|29812|N-myc downstream regulated gene 3	NM_013865|Ndrg3|29812|N-myc downstream regulated gene 3	NM_180956|Ndrg3|29812|N-myc downstream regulated gene 3
mm9_v1_chr7_-_133726668_133726903	0.145798	FOX{I1,J2}.p2	U92811|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	U47106|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC060306|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	U68064|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	AK078976|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	NM_009907|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC080759|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)	BC058753|Cln3|12752|ceroid lipofuscinosis, neuronal 3, juvenile (Batten, Spielmeyer-Vogt disease)
mm9_v1_chrX_-_104035877_104035981	0.145213	FOX{I1,J2}.p2	AK084983|Zcchc5|213436|zinc finger, CCHC domain containing 5	BC064821|Zcchc5|213436|zinc finger, CCHC domain containing 5	NM_199468|Zcchc5|213436|zinc finger, CCHC domain containing 5
mm9_v1_chr3_-_59024076_59024180	0.1448	FOX{I1,J2}.p2	AK014807|P2ry12|70839|purinergic receptor P2Y, G-protein coupled 12
mm9_v1_chr8_-_47209499_47209499	0.144584	FOX{I1,J2}.p2	NM_207213|Snx25|102141|sorting nexin 25
mm9_v1_chr1_-_188529867_188529872	0.144534	FOX{I1,J2}.p2	X57413|Tgfb2|21808|transforming growth factor, beta 2	NM_009367|Tgfb2|21808|transforming growth factor, beta 2
mm9_v1_chr1_-_158649117_158649213	0.144507	FOX{I1,J2}.p2	BC031473|Fam20b|215015|family with sequence similarity 20, member B
mm9_v1_chr2_+_158436493_158436936	0.143081	FOX{I1,J2}.p2	AY578289|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	NM_009508|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	BC052020|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK163754|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK140468|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AK163661|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1	AJ001598|Slc32a1|22348|solute carrier family 32 (GABA vesicular transporter), member 1
mm9_v1_chr17_-_24300592_24300754	0.142974	FOX{I1,J2}.p2	AK168432|Amdhd2|245847|amidohydrolase domain containing 2	AK078259|Amdhd2|245847|amidohydrolase domain containing 2	AK077584|Amdhd2|245847|amidohydrolase domain containing 2	AK159860|Amdhd2|245847|amidohydrolase domain containing 2	AK090009|Amdhd2|245847|amidohydrolase domain containing 2	AK154209|Amdhd2|245847|amidohydrolase domain containing 2	NM_172935|Amdhd2|245847|amidohydrolase domain containing 2
mm9_v1_chr6_-_112896894_112896953	0.142603	FOX{I1,J2}.p2	AK122276|Srgap3|259302|SLIT-ROBO Rho GTPase activating protein 3
mm9_v1_chr4_-_131394135_131394216	0.142392	FOX{I1,J2}.p2	BC080736|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	BC048694|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	AK052720|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	D88187|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	AK148515|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	NM_001083119|Ptpru|19273|protein tyrosine phosphatase, receptor type, U	NM_011214|Ptpru|19273|protein tyrosine phosphatase, receptor type, U
mm9_v1_chr6_+_128942978_128943066	0.142308	FOX{I1,J2}.p2	BC051485|BC064078|408064|cDNA sequence BC064078	BC016205|BC064078|408064|cDNA sequence BC064078	BC017132|BC064078|408064|cDNA sequence BC064078	BC025095|BC064078|408064|cDNA sequence BC064078	BC038635|BC064078|408064|cDNA sequence BC064078	BC096405|BC064078|408064|cDNA sequence BC064078	BC064078|BC064078|408064|cDNA sequence BC064078	AK134020|BC064078|408064|cDNA sequence BC064078
mm9_v1_chr19_+_8815893_8816001	0.142253	FOX{I1,J2}.p2	NM_001167799|Stx5a|56389|syntaxin 5A	AK002722|Stx5a|56389|syntaxin 5A	BC004849|Stx5a|56389|syntaxin 5A
mm9_v1_chr2_+_31951030_31951062	0.142139	FOX{I1,J2}.p2	AK134638|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3
mm9_v1_chr2_-_152657417_152657458	0.14209	FOX{I1,J2}.p2	BC089016|Bcl2l1|12048|BCL2-like 1	NM_009743|Bcl2l1|12048|BCL2-like 1
mm9_v1_chr2_-_44965866_44965983	0.141859	FOX{I1,J2}.p2	AK122312|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535781|Zeb2|24136|zinc finger E-box binding homeobox 2	AJ535783|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr13_-_93253967_93253985	0.141855	FOX{I1,J2}.p2	AK015100|Fam151b|73942|family with sequence similarity 151, member B	AK162422|Fam151b|73942|family with sequence similarity 151, member B	NM_001163627|Fam151b|73942|family with sequence similarity 151, member B
mm9_v1_chr2_-_89892475_89892478	0.141175	FOX{I1,J2}.p2	BC111111|Olfr140|57272|olfactory receptor 140	BC141888|Olfr140|57272|olfactory receptor 140	NM_020515|Olfr140|57272|olfactory receptor 140
mm9_v1_chr7_-_129245303_129245368	0.141021	FOX{I1,J2}.p2	AK167447|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK089103|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	BC092379|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	BC060951|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK018717|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK008788|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK009698|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK010307|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK011302|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK018688|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK151719|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	AK152995|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1	NM_028177|Ndufab1|70316|NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1
mm9_v1_chr12_-_4848240_4848402	0.140399	FOX{I1,J2}.p2	AB107918|Fkbp1b|14226|FK506 binding protein 1b	AB285017|Fkbp1b|14226|FK506 binding protein 1b	AF060872|Fkbp1b|14226|FK506 binding protein 1b	BC061121|Fkbp1b|14226|FK506 binding protein 1b	BC049596|Fkbp1b|14226|FK506 binding protein 1b	AK005201|Fkbp1b|14226|FK506 binding protein 1b	NM_016863|Fkbp1b|14226|FK506 binding protein 1b
mm9_v1_chr6_+_56952293_56952348	0.139714	FOX{I1,J2}.p2	BC125532|Vmn1r6|171193|vomeronasal 1 receptor 6	BC125534|Vmn1r6|171193|vomeronasal 1 receptor 6	NM_134175|Vmn1r6|171193|vomeronasal 1 receptor 6
mm9_v1_chr14_+_79987495_79987615	0.138731	FOX{I1,J2}.p2	AK082328|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	NM_026474|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK045153|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK141416|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK007881|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK010830|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK020433|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK148838|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	BC009167|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)	AK010711|Sugt1|67955|SGT1, suppressor of G2 allele of SKP1 (S. cerevisiae)
mm9_v1_chr2_+_14525932_14526000	0.138313	FOX{I1,J2}.p2	AK034054|Cacnb2|12296|calcium channel, voltage-dependent, beta 2 subunit	NM_023116|Cacnb2|12296|calcium channel, voltage-dependent, beta 2 subunit	FM872408|Cacnb2|12296|calcium channel, voltage-dependent, beta 2 subunit	BC109156|Cacnb2|12296|calcium channel, voltage-dependent, beta 2 subunit	BC109157|Cacnb2|12296|calcium channel, voltage-dependent, beta 2 subunit
mm9_v1_chr5_-_45190731_45190836	0.138076	FOX{I1,J2}.p2	AB221652|Ldb2|16826|LIM domain binding 2
mm9_v1_chr19_-_6984433_6984519	0.137925	FOX{I1,J2}.p2	AB041573|Prdx5|54683|peroxiredoxin 5	BC008174|Prdx5|54683|peroxiredoxin 5
mm9_v1_chr8_-_20020350_20020421	0.137898	FOX{I1,J2}.p2	BC025151|2610005L07Rik|381598|cadherin 11 pseudogene	AK009182|2610005L07Rik|381598|cadherin 11 pseudogene	AK160987|2610005L07Rik|381598|cadherin 11 pseudogene	AK131627|2610005L07Rik|381598|cadherin 11 pseudogene	AK035187|2610005L07Rik|381598|cadherin 11 pseudogene
mm9_v1_chr1_-_10027971_10028048	0.137756	FOX{I1,J2}.p2	AF065386|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	NM_013715|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	BC046753|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AF068223|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	U70736|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK133073|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK002761|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK005728|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK151492|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK005113|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK012499|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)	AK146271|Cops5|26754|COP9 (constitutive photomorphogenic) homolog, subunit 5 (Arabidopsis thaliana)
mm9_v1_chr19_-_58529766_58529841	0.137612	FOX{I1,J2}.p2	BC044783|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1	AK076171|Gfra1|14585|glial cell line derived neurotrophic factor family receptor alpha 1
mm9_v1_chr7_-_20093663_20093722	0.13726	FOX{I1,J2}.p2	BC043666|Bloc1s3|232946|biogenesis of lysosome-related organelles complex-1, subunit 3	NM_177692|Bloc1s3|232946|biogenesis of lysosome-related organelles complex-1, subunit 3	AK054006|Bloc1s3|232946|biogenesis of lysosome-related organelles complex-1, subunit 3	AK153811|Bloc1s3|232946|biogenesis of lysosome-related organelles complex-1, subunit 3
mm9_v1_chr11_+_100721765_100721860	0.136757	FOX{I1,J2}.p2	NM_001164062|Stat5a|20850|signal transducer and activator of transcription 5A	AK090254|Stat5a|20850|signal transducer and activator of transcription 5A	BC056647|Stat5a|20850|signal transducer and activator of transcription 5A	Z48538|Stat5a|20850|signal transducer and activator of transcription 5A	AY299491|Stat5a|20850|signal transducer and activator of transcription 5A	AY299492|Stat5a|20850|signal transducer and activator of transcription 5A	EU249543|Stat5a|20850|signal transducer and activator of transcription 5A	AK154070|Stat5a|20850|signal transducer and activator of transcription 5A	BC008998|Stat5a|20850|signal transducer and activator of transcription 5A
mm9_v1_chr11_-_73137838_73138062	0.136466	FOX{I1,J2}.p2	AK035910|Aspa|11484|aspartoacylase	AF212998|Aspa|11484|aspartoacylase
mm9_v1_chr13_+_104899814_104899860	0.135825	FOX{I1,J2}.p2	AK049820|Sgtb|218544|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
mm9_v1_chr3_+_142364014_142364083	0.135628	FOX{I1,J2}.p2	AK145623|Ccbl2|229905|cysteine conjugate-beta lyase 2	AF363737|Ccbl2|229905|cysteine conjugate-beta lyase 2	AK049569|Ccbl2|229905|cysteine conjugate-beta lyase 2	NM_173763|Ccbl2|229905|cysteine conjugate-beta lyase 2	BC085287|Ccbl2|229905|cysteine conjugate-beta lyase 2
mm9_v1_chrX_-_72823561_72823573	0.135577	FOX{I1,J2}.p2	BC050853|Rab39b|67790|RAB39B, member RAS oncogene family
mm9_v1_chrX_+_157600681_157600703	0.135382	FOX{I1,J2}.p2	AK040521|Scml2|107815|sex comb on midleg-like 2 (Drosophila)	AK031490|Scml2|107815|sex comb on midleg-like 2 (Drosophila)	NM_133194|Scml2|107815|sex comb on midleg-like 2 (Drosophila)
mm9_v1_chr15_+_76210904_76210993	0.135316	FOX{I1,J2}.p2	AK036810|Heatr7a|223658|HEAT repeat containing 7A	NM_175457|Heatr7a|223658|HEAT repeat containing 7A	AK170702|Heatr7a|223658|HEAT repeat containing 7A	AK090131|Heatr7a|223658|HEAT repeat containing 7A	AK147808|Heatr7a|223658|HEAT repeat containing 7A	AK147897|Heatr7a|223658|HEAT repeat containing 7A	AK038863|Heatr7a|223658|HEAT repeat containing 7A	AK052153|Heatr7a|223658|HEAT repeat containing 7A
mm9_v1_chr13_+_30228397_30228535	0.135189	FOX{I1,J2}.p2	BC024653|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK020281|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK033388|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK137755|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AK146984|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AB297382|Mboat1|218121|membrane bound O-acyltransferase domain containing 1	AB305045|Mboat1|218121|membrane bound O-acyltransferase domain containing 1
mm9_v1_chr8_+_119983664_119983684	0.134971	FOX{I1,J2}.p2	
mm9_v1_chr8_+_26830853_26830927	0.134885	FOX{I1,J2}.p2	AK007542|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B	BC039626|Ppapdc1b|71910|phosphatidic acid phosphatase type 2 domain containing 1B
mm9_v1_chr16_+_37916538_37916581	0.134706	FOX{I1,J2}.p2	AK141990|Gpr156|239845|G protein-coupled receptor 156	BC059227|Gpr156|239845|G protein-coupled receptor 156	NM_153394|Gpr156|239845|G protein-coupled receptor 156
mm9_v1_chr5_-_143656888_143656920	0.134696	FOX{I1,J2}.p2	BC115599|Fbxl18|231863|F-box and leucine-rich repeat protein 18	BC139739|Fbxl18|231863|F-box and leucine-rich repeat protein 18	AK154354|Fbxl18|231863|F-box and leucine-rich repeat protein 18	AK144757|Fbxl18|231863|F-box and leucine-rich repeat protein 18	NM_001033312|Fbxl18|231863|F-box and leucine-rich repeat protein 18
mm9_v1_chr13_+_54682957_54683061	0.133924	FOX{I1,J2}.p2	AK090305|Arl10|56795|ADP-ribosylation factor-like 10
mm9_v1_chr3_+_145600974_145601015	0.133157	FOX{I1,J2}.p2	BC049577|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	AK010378|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	BC115465|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	NM_025555|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	AK019404|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene	AK077565|2410004B18Rik|66421|RIKEN cDNA 2410004B18 gene
mm9_v1_chr6_+_18120686_18120770	0.132666	FOX{I1,J2}.p2	M60493|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog	M69298|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog	NM_021050|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog	AK033621|Cftr|12638|cystic fibrosis transmembrane conductance regulator homolog
mm9_v1_chr9_+_39421128_39421153	0.132112	FOX{I1,J2}.p2	BC125353|Olfr148|258498|olfactory receptor 148	BC132239|Olfr148|258498|olfactory receptor 148	NM_146505|Olfr148|258498|olfactory receptor 148
mm9_v1_chr12_+_118997623_118997625	0.132108	FOX{I1,J2}.p2	AK134824|Rapgef5|217944|Rap guanine nucleotide exchange factor (GEF) 5
mm9_v1_chr12_-_106103171_106103182	0.132069	FOX{I1,J2}.p2	BC096470|Clmn|94040|calmin
mm9_v1_chr9_+_107483603_107483637	0.131982	FOX{I1,J2}.p2	BC018457|Hyal3|109685|hyaluronoglucosaminidase 3	NM_178020|Hyal3|109685|hyaluronoglucosaminidase 3	AY048681|Hyal3|109685|hyaluronoglucosaminidase 3
mm9_v1_chr7_-_69565024_69565050	0.131297	FOX{I1,J2}.p2	BC054771|Mkrn3|22652|makorin, ring finger protein, 3	NM_011746|Mkrn3|22652|makorin, ring finger protein, 3	AK134870|Mkrn3|22652|makorin, ring finger protein, 3
mm9_v1_chr2_-_30214724_30214844	0.131171	FOX{I1,J2}.p2	AF426314|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	BC024477|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	NM_139302|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK155248|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK152409|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK152502|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	EF676083|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	AK167762|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2	BC028859|Sh3glb2|227700|SH3-domain GRB2-like endophilin B2
mm9_v1_chr11_-_115489392_115489479	0.130837	FOX{I1,J2}.p2	AK172622|Slc25a19|67283|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	AK168145|Slc25a19|67283|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	BC018167|Slc25a19|67283|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	AK005710|Slc25a19|67283|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	NM_026071|Slc25a19|67283|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19	BC046767|Slc25a19|67283|solute carrier family 25 (mitochondrial thiamine pyrophosphate carrier), member 19
mm9_v1_chr11_+_90110835_90110949	0.130824	FOX{I1,J2}.p2	AK004819|Mmd|67468|monocyte to macrophage differentiation-associated	AK158577|Mmd|67468|monocyte to macrophage differentiation-associated	AK171637|Mmd|67468|monocyte to macrophage differentiation-associated	AK149704|Mmd|67468|monocyte to macrophage differentiation-associated	BC028492|Mmd|67468|monocyte to macrophage differentiation-associated	BC076566|Mmd|67468|monocyte to macrophage differentiation-associated	AY424300|Mmd|67468|monocyte to macrophage differentiation-associated
mm9_v1_chr11_-_109856977_109857129	0.130702	FOX{I1,J2}.p2	BC089557|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	AK173034|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	BC141401|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	AF498362|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	AK138196|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b	NM_013851|Abca8b|27404|ATP-binding cassette, sub-family A (ABC1), member 8b
mm9_v1_chr10_-_116813919_116814033	0.130325	FOX{I1,J2}.p2	AK048615|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK046856|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK168764|Cpsf6|432508|cleavage and polyadenylation specific factor 6	BC068133|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK049749|Cpsf6|432508|cleavage and polyadenylation specific factor 6	AK077684|Cpsf6|432508|cleavage and polyadenylation specific factor 6	NM_001013391|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr17_-_23923163_23923198	0.130216	FOX{I1,J2}.p2	BC024947|Flywch2|76917|FLYWCH family member 2
mm9_v1_chr17_-_45570655_45570685	0.13019	FOX{I1,J2}.p2	BC031480|Cdc5l|71702|cell division cycle 5-like (S. pombe)	NM_152810|Cdc5l|71702|cell division cycle 5-like (S. pombe)	AK004547|Cdc5l|71702|cell division cycle 5-like (S. pombe)
mm9_v1_chr18_+_37885359_37885546	0.130133	FOX{I1,J2}.p2	BC054787|Pcdhga8|93716|protocadherin gamma subfamily A, 8	NM_033591|Pcdhga8|93716|protocadherin gamma subfamily A, 8	BC054555|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AK220461|Pcdhga8|93716|protocadherin gamma subfamily A, 8	AY013802|Pcdhga8|93716|protocadherin gamma subfamily A, 8
mm9_v1_chr10_+_51246145_51246210	0.13004	FOX{I1,J2}.p2	
mm9_v1_chr19_-_38199737_38199810	0.128983	FOX{I1,J2}.p2	BC093529|Rbp4|19662|retinol binding protein 4, plasma	NM_001159487|Rbp4|19662|retinol binding protein 4, plasma
mm9_v1_chr11_-_97643677_97643690	0.128383	FOX{I1,J2}.p2	AK168133|Rpl23|65019|ribosomal protein L23	AF287271|Rpl23|65019|ribosomal protein L23	BC025918|Rpl23|65019|ribosomal protein L23	BC081448|Rpl23|65019|ribosomal protein L23
mm9_v1_chr9_+_64880208_64880292	0.128305	FOX{I1,J2}.p2	AK155605|Dpp8|74388|dipeptidylpeptidase 8	BC043124|Dpp8|74388|dipeptidylpeptidase 8	BC059222|Dpp8|74388|dipeptidylpeptidase 8	NM_028906|Dpp8|74388|dipeptidylpeptidase 8
mm9_v1_chr8_-_90886051_90886133	0.128302	FOX{I1,J2}.p2	AF084259|Brd7|26992|bromodomain containing 7	AK142758|Brd7|26992|bromodomain containing 7	NM_012047|Brd7|26992|bromodomain containing 7	AK138934|Brd7|26992|bromodomain containing 7
mm9_v1_chr18_-_47528483_47528523	0.128234	FOX{I1,J2}.p2	BC059238|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK042751|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	NM_018744|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A	AK082711|Sema6a|20358|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
mm9_v1_chr5_-_54098762_54098942	0.127946	FOX{I1,J2}.p2	BC020534|Cckar|12425|cholecystokinin A receptor	AK143895|Cckar|12425|cholecystokinin A receptor	AK004730|Cckar|12425|cholecystokinin A receptor	AK146738|Cckar|12425|cholecystokinin A receptor	AK147052|Cckar|12425|cholecystokinin A receptor	NM_009827|Cckar|12425|cholecystokinin A receptor
mm9_v1_chr7_-_149069070_149069207	0.127867	FOX{I1,J2}.p2	AK049198|Tollip|54473|toll interacting protein
mm9_v1_chr3_-_151856766_151856837	0.127811	FOX{I1,J2}.p2	BC017161|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	NM_025926|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr2_+_170557306_170557456	0.127778	FOX{I1,J2}.p2	BC066822|Dok5|76829|docking protein 5	NM_001163686|Dok5|76829|docking protein 5	NM_029761|Dok5|76829|docking protein 5	AK044148|Dok5|76829|docking protein 5	AF418208|Dok5|76829|docking protein 5
mm9_v1_chr14_+_19103655_19103798	0.127285	FOX{I1,J2}.p2	NM_023526|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK028539|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK148040|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK010285|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	BC061092|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AK167340|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1	AF225707|Nkiras1|69721|NFKB inhibitor interacting Ras-like protein 1
mm9_v1_chr14_-_60216634_60216802	0.12658	FOX{I1,J2}.p2	AK217714|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	BC006901|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK038926|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK032600|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK009280|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK032813|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK045962|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK039148|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	AK042494|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168535|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168536|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168537|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_001168538|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1	NM_027986|Cdadc1|71891|cytidine and dCMP deaminase domain containing 1
mm9_v1_chr19_+_12284057_12284057	0.125783	FOX{I1,J2}.p2	BC133710|Olfr1431|258409|olfactory receptor 1431	NM_146414|Olfr1431|258409|olfactory receptor 1431
mm9_v1_chr2_+_136716953_136716953	0.125635	FOX{I1,J2}.p2	AK010392|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene	NM_028201|2210009G21Rik|74243|RIKEN cDNA 2210009G21 gene
mm9_v1_chr10_-_52058305_52058381	0.125465	FOX{I1,J2}.p2	AK008806|Gopc|94221|golgi associated PDZ and coiled-coil motif containing
mm9_v1_chr2_-_44965603_44965763	0.125444	FOX{I1,J2}.p2	AK012377|Zeb2|24136|zinc finger E-box binding homeobox 2	AF033116|Zeb2|24136|zinc finger E-box binding homeobox 2	AK141157|Zeb2|24136|zinc finger E-box binding homeobox 2
mm9_v1_chr9_+_65524331_65524426	0.125017	FOX{I1,J2}.p2	AK169243|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	NM_010952|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK143231|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK146074|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK160444|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168853|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AK168662|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC055442|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC083114|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	AF057298|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC005477|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene	BC110690|Oaz2-ps|18247|ornithine decarboxylase antizyme 2, pseudogene
mm9_v1_chr19_-_40686713_40686746	0.124947	FOX{I1,J2}.p2	DQ278871|Tctn3|67590|tectonic family member 3
mm9_v1_chr11_-_16408103_16408109	0.124228	FOX{I1,J2}.p2	AK012393|Sec61g|20335|SEC61, gamma subunit
mm9_v1_chr8_-_3279545_3279616	0.124193	FOX{I1,J2}.p2	AK052187|Insr|16337|insulin receptor	NM_010568|Insr|16337|insulin receptor
mm9_v1_chr2_-_150277200_150277236	0.123917	FOX{I1,J2}.p2	BC023805|Zfp442|668923|zinc finger protein 442	NM_001177550|Zfp442|668923|zinc finger protein 442	AB470967|Zfp442|668923|zinc finger protein 442
mm9_v1_chr19_+_3323339_3323356	0.123585	FOX{I1,J2}.p2	AK133472|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver	AK147770|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver	AK077454|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver	AK136487|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver	AK128925|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver	AK149688|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver
mm9_v1_chr4_-_133101912_133101941	0.123555	FOX{I1,J2}.p2	NM_010948|Nudc|18221|nuclear distribution gene C homolog (Aspergillus)
mm9_v1_chr2_+_91551067_91551117	0.123325	FOX{I1,J2}.p2	AK147045|Harbi1|241547|harbinger transposase derived 1	AK084226|Harbi1|241547|harbinger transposase derived 1	AK080671|Harbi1|241547|harbinger transposase derived 1	BC094315|Harbi1|241547|harbinger transposase derived 1	NM_178724|Harbi1|241547|harbinger transposase derived 1	AK045343|Harbi1|241547|harbinger transposase derived 1
mm9_v1_chr5_-_123183537_123183571	0.122845	FOX{I1,J2}.p2	AK213252|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr4_-_104782337_104782438	0.122836	FOX{I1,J2}.p2	AK044030|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit	AK134573|Prkaa2|108079|protein kinase, AMP-activated, alpha 2 catalytic subunit
mm9_v1_chr8_+_56040553_56040581	0.122554	FOX{I1,J2}.p2	BC024759|Gpm6a|234267|glycoprotein m6a	BC033394|Gpm6a|234267|glycoprotein m6a	S65735|Gpm6a|234267|glycoprotein m6a	BC029711|Gpm6a|234267|glycoprotein m6a
mm9_v1_chr5_-_75440586_75440675	0.121978	FOX{I1,J2}.p2	BC048435|Chic2|74277|cysteine-rich hydrophobic domain 2	AK172289|Chic2|74277|cysteine-rich hydrophobic domain 2	AK006962|Chic2|74277|cysteine-rich hydrophobic domain 2	NM_028850|Chic2|74277|cysteine-rich hydrophobic domain 2
mm9_v1_chrX_-_16488889_16488889	0.121642	FOX{I1,J2}.p2	BC090623|Ndp|17986|Norrie disease (pseudoglioma) (human)	NM_010883|Ndp|17986|Norrie disease (pseudoglioma) (human)
mm9_v1_chr6_-_72548335_72548408	0.121073	FOX{I1,J2}.p2	AK049155|Elmod3|232089|ELMO/CED-12 domain containing 3	NM_144917|Elmod3|232089|ELMO/CED-12 domain containing 3	AK084010|Elmod3|232089|ELMO/CED-12 domain containing 3	AK164974|Elmod3|232089|ELMO/CED-12 domain containing 3
mm9_v1_chr2_+_74663857_74664073	0.121053	FOX{I1,J2}.p2	NM_016804|Mtx2|53375|metaxin 2	AK169048|Mtx2|53375|metaxin 2	AB041562|Mtx2|53375|metaxin 2	AK168000|Mtx2|53375|metaxin 2	AK168045|Mtx2|53375|metaxin 2	AK087933|Mtx2|53375|metaxin 2	AF053550|Mtx2|53375|metaxin 2	AK168021|Mtx2|53375|metaxin 2	AK083055|Mtx2|53375|metaxin 2	BC006641|Mtx2|53375|metaxin 2	AK005233|Mtx2|53375|metaxin 2	AK179720|Mtx2|53375|metaxin 2	AK179764|Mtx2|53375|metaxin 2	AK219408|Mtx2|53375|metaxin 2
mm9_v1_chr4_-_148473897_148473960	0.121001	FOX{I1,J2}.p2	BC028952|Pex14|56273|peroxisomal biogenesis factor 14	AF097512|Pex14|56273|peroxisomal biogenesis factor 14	NM_019781|Pex14|56273|peroxisomal biogenesis factor 14	AK148779|Pex14|56273|peroxisomal biogenesis factor 14
mm9_v1_chr14_+_76362274_76362304	0.120746	FOX{I1,J2}.p2	AK032624|Kctd4|67516|potassium channel tetramerisation domain containing 4	AK017592|Kctd4|67516|potassium channel tetramerisation domain containing 4	BC028748|Kctd4|67516|potassium channel tetramerisation domain containing 4	AK032314|Kctd4|67516|potassium channel tetramerisation domain containing 4
mm9_v1_chr19_-_5771326_5771432	0.120287	FOX{I1,J2}.p2	BC034519|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK144134|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK019240|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK134356|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK161813|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AF276514|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	NM_023912|Scyl1|78891|SCY1-like 1 (S. cerevisiae)	AK145869|Scyl1|78891|SCY1-like 1 (S. cerevisiae)
mm9_v1_chr11_+_31770872_31770914	0.120225	FOX{I1,J2}.p2	AK154289|Cpeb4|67579|cytoplasmic polyadenylation element binding protein 4	AK089951|Cpeb4|67579|cytoplasmic polyadenylation element binding protein 4	AK162101|Cpeb4|67579|cytoplasmic polyadenylation element binding protein 4
mm9_v1_chr5_+_144090975_144090986	0.118948	FOX{I1,J2}.p2	AK002861|0610040B10Rik|67672|RIKEN cDNA 0610040B10 gene	AK009603|0610040B10Rik|67672|RIKEN cDNA 0610040B10 gene	AK144491|0610040B10Rik|67672|RIKEN cDNA 0610040B10 gene
mm9_v1_chr17_+_29405841_29405930	0.118763	FOX{I1,J2}.p2	BC004004|BC004004|80748|cDNA sequence BC004004	AK157037|BC004004|80748|cDNA sequence BC004004	BC058575|BC004004|80748|cDNA sequence BC004004
mm9_v1_chr2_-_30270970_30271290	0.118578	FOX{I1,J2}.p2	X85983|Crat|12908|carnitine acetyltransferase	BC006668|Crat|12908|carnitine acetyltransferase	AK041431|Crat|12908|carnitine acetyltransferase	AK170740|Crat|12908|carnitine acetyltransferase	NM_007760|Crat|12908|carnitine acetyltransferase	AK132179|Crat|12908|carnitine acetyltransferase
mm9_v1_chr7_+_53693190_53693196	0.118575	FOX{I1,J2}.p2	AK079373|Kcnc1|16502|potassium voltage gated channel, Shaw-related subfamily, member 1
mm9_v1_chr15_+_92427539_92427556	0.118515	FOX{I1,J2}.p2	NM_001164594|Pdzrn4|239618|PDZ domain containing RING finger 4	AK135524|Pdzrn4|239618|PDZ domain containing RING finger 4
mm9_v1_chr7_+_107423813_107423829	0.118497	FOX{I1,J2}.p2	AK164085|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr2_+_73109981_73109991	0.118158	FOX{I1,J2}.p2	AY591908|Sp9|381373|trans-acting transcription factor 9	NM_001005343|Sp9|381373|trans-acting transcription factor 9	AK135123|Sp9|381373|trans-acting transcription factor 9
mm9_v1_chr16_-_45158709_45158787	0.118003	FOX{I1,J2}.p2	AK030566|Slc35a5|74102|solute carrier family 35, member A5	AK003124|Slc35a5|74102|solute carrier family 35, member A5	AK052833|Slc35a5|74102|solute carrier family 35, member A5	BC011115|Slc35a5|74102|solute carrier family 35, member A5	AK085567|Slc35a5|74102|solute carrier family 35, member A5	AK033921|Slc35a5|74102|solute carrier family 35, member A5	AK170026|Slc35a5|74102|solute carrier family 35, member A5	AK034527|Slc35a5|74102|solute carrier family 35, member A5	AK150825|Slc35a5|74102|solute carrier family 35, member A5	AK151484|Slc35a5|74102|solute carrier family 35, member A5	NM_028756|Slc35a5|74102|solute carrier family 35, member A5
mm9_v1_chr8_+_72676676_72676679	0.117372	FOX{I1,J2}.p2	BC045147|Mef2b|17259|myocyte enhancer factor 2B	NM_001045484|Mef2b|17259|myocyte enhancer factor 2B	NM_008578|Mef2b|17259|myocyte enhancer factor 2B	D87833|Mef2b|17259|myocyte enhancer factor 2B	D87834|Mef2b|17259|myocyte enhancer factor 2B	D87835|Mef2b|17259|myocyte enhancer factor 2B	D87836|Mef2b|17259|myocyte enhancer factor 2B
mm9_v1_chr19_-_44144244_44144286	0.11728	FOX{I1,J2}.p2	AK145990|Erlin1|226144|ER lipid raft associated 1	NM_001164359|Erlin1|226144|ER lipid raft associated 1	NM_001164360|Erlin1|226144|ER lipid raft associated 1
mm9_v1_chr3_-_38349112_38349206	0.117244	FOX{I1,J2}.p2	BC051515|Ankrd50|99696|ankyrin repeat domain 50
mm9_v1_chr7_-_26460180_26460184	0.117179	FOX{I1,J2}.p2	AK079312|Tmem91|320208|transmembrane protein 91	NM_177102|Tmem91|320208|transmembrane protein 91
mm9_v1_chr7_-_30875415_30875528	0.11659	FOX{I1,J2}.p2	BC019790|Zfp566|72556|zinc finger protein 566	AK012367|Zfp566|72556|zinc finger protein 566	NM_152814|Zfp566|72556|zinc finger protein 566
mm9_v1_chr3_-_152003317_152003373	0.11622	FOX{I1,J2}.p2	BC138328|Fam73a|215708|family with sequence similarity 73, member A	BC138329|Fam73a|215708|family with sequence similarity 73, member A	AK166051|Fam73a|215708|family with sequence similarity 73, member A	BC059928|Fam73a|215708|family with sequence similarity 73, member A	AK044739|Fam73a|215708|family with sequence similarity 73, member A	BC098205|Fam73a|215708|family with sequence similarity 73, member A	AK045347|Fam73a|215708|family with sequence similarity 73, member A	AK143366|Fam73a|215708|family with sequence similarity 73, member A	AK085017|Fam73a|215708|family with sequence similarity 73, member A	NM_001162375|Fam73a|215708|family with sequence similarity 73, member A	NM_174868|Fam73a|215708|family with sequence similarity 73, member A
mm9_v1_chr11_+_70338856_70338858	0.11613	FOX{I1,J2}.p2	NM_008946|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6
mm9_v1_chr8_-_13494457_13494536	0.11591	FOX{I1,J2}.p2	BC005444|Gas6|14456|growth arrest specific 6	X59846|Gas6|14456|growth arrest specific 6	AK086187|Gas6|14456|growth arrest specific 6	NM_019521|Gas6|14456|growth arrest specific 6
mm9_v1_chr18_+_37179802_37179999	0.115648	FOX{I1,J2}.p2	AY013759|Pcdha12|192164|protocadherin alpha 12	NM_138663|Pcdha12|192164|protocadherin alpha 12	AB008180|Pcdha12|192164|protocadherin alpha 12
mm9_v1_chr8_+_72839642_72839751	0.115593	FOX{I1,J2}.p2	AK053885|Lass1|93898|LAG1 homolog, ceramide synthase 1	NM_001163282|Gdf1|14559|growth differentiation factor 1	NM_138647|Lass1|93898|LAG1 homolog, ceramide synthase 1	M62301|Gdf1|14559|growth differentiation factor 1	AK162823|Gdf1|14559|growth differentiation factor 1	BC056973|Gdf1|14559|growth differentiation factor 1	BC094351|Gdf1|14559|growth differentiation factor 1	BC132318|Lass1|93898|LAG1 homolog, ceramide synthase 1
mm9_v1_chr9_-_44611055_44611072	0.11559	FOX{I1,J2}.p2	AK149384|Ttc36|192653|tetratricopeptide repeat domain 36
mm9_v1_chr7_-_112959591_112959616	0.115181	FOX{I1,J2}.p2	NM_025301|Mrpl17|27397|mitochondrial ribosomal protein L17
mm9_v1_chr11_+_80022524_80022572	0.114918	FOX{I1,J2}.p2	AK147801|Rhot1|59040|ras homolog gene family, member T1	AK167502|Rhot1|59040|ras homolog gene family, member T1	NM_001163354|Rhot1|59040|ras homolog gene family, member T1	NM_001163355|Rhot1|59040|ras homolog gene family, member T1	NM_021536|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr11_+_117623703_117623821	0.114518	FOX{I1,J2}.p2	AK137381|Tnrc6c|217351|trinucleotide repeat containing 6C
mm9_v1_chr16_-_17722915_17723043	0.114364	FOX{I1,J2}.p2	AF328770|Med15|94112|mediator complex subunit 15	AK131186|Med15|94112|mediator complex subunit 15	AK171628|Med15|94112|mediator complex subunit 15	BC054779|Med15|94112|mediator complex subunit 15	AK166522|Med15|94112|mediator complex subunit 15	AK038915|Med15|94112|mediator complex subunit 15	AK052231|Med15|94112|mediator complex subunit 15	AK142224|Med15|94112|mediator complex subunit 15	NM_001040683|Med15|94112|mediator complex subunit 15	NM_033609|Med15|94112|mediator complex subunit 15	AK169904|Med15|94112|mediator complex subunit 15
mm9_v1_chr12_-_85958287_85958415	0.114255	FOX{I1,J2}.p2	AJ001166|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4	AK028420|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4	BC050102|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4	NM_008992|Abcd4|19300|ATP-binding cassette, sub-family D (ALD), member 4
mm9_v1_chr17_+_35272688_35272836	0.113484	FOX{I1,J2}.p2	AK164266|Bag6|224727|BCL2-associated athanogene 6	AK170134|Bag6|224727|BCL2-associated athanogene 6
mm9_v1_chr3_-_153388047_153388152	0.113467	FOX{I1,J2}.p2	BC131987|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC132317|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	BC058387|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	AK034804|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	NM_011372|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3	Y11342|St6galnac3|20447|ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
mm9_v1_chr9_+_55388955_55389013	0.113441	FOX{I1,J2}.p2	NM_027397|Isl2|104360|insulin related protein 2 (islet 2)	AK013964|Isl2|104360|insulin related protein 2 (islet 2)	BC120880|Isl2|104360|insulin related protein 2 (islet 2)	BC148307|Isl2|104360|insulin related protein 2 (islet 2)
mm9_v1_chr5_+_77694506_77694565	0.113119	FOX{I1,J2}.p2	AK004945|Rest|19712|RE1-silencing transcription factor	NM_011263|Rest|19712|RE1-silencing transcription factor	AK156514|Rest|19712|RE1-silencing transcription factor
mm9_v1_chr4_-_34634507_34634712	0.113057	FOX{I1,J2}.p2	Z71268|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	BC012252|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	AK144170|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1	NM_011895|Slc35a1|24060|solute carrier family 35 (CMP-sialic acid transporter), member 1
mm9_v1_chr9_-_106378454_106378490	0.112952	FOX{I1,J2}.p2	BC058754|Parp3|235587|poly (ADP-ribose) polymerase family, member 3
mm9_v1_chr12_+_85750017_85750095	0.112918	FOX{I1,J2}.p2	AK013494|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	NM_028377|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	AK133381|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	BC151099|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene	BC151103|2900006K08Rik|72873|RIKEN cDNA 2900006K08 gene
mm9_v1_chrX_-_119510890_119511030	0.112848	FOX{I1,J2}.p2	BC027045|Nap1l3|54561|nucleosome assembly protein 1-like 3	AK078521|Nap1l3|54561|nucleosome assembly protein 1-like 3	BC020176|Nap1l3|54561|nucleosome assembly protein 1-like 3	NM_138742|Nap1l3|54561|nucleosome assembly protein 1-like 3	AB010711|Nap1l3|54561|nucleosome assembly protein 1-like 3
mm9_v1_chr13_-_101386865_101386925	0.112508	FOX{I1,J2}.p2	DQ143929|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	DQ682659|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	DQ682661|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	AK156238|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	NM_178410|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	AK133741|Marveld2|218518|MARVEL (membrane-associating) domain containing 2	NM_001038602|Marveld2|218518|MARVEL (membrane-associating) domain containing 2
mm9_v1_chr8_+_74474946_74475007	0.111933	FOX{I1,J2}.p2	AK158413|Zfp961|234413|zinc finger protein 961	NM_001164581|Zfp961|234413|zinc finger protein 961	BC065788|Zfp961|234413|zinc finger protein 961	AK020714|Zfp961|234413|zinc finger protein 961	BC049349|Zfp961|234413|zinc finger protein 961
mm9_v1_chr4_-_118905241_118905332	0.11178	FOX{I1,J2}.p2	AK158349|AU022252|230696|expressed sequence AU022252	AK167445|AU022252|230696|expressed sequence AU022252	BC035522|AU022252|230696|expressed sequence AU022252	AK082225|4930538K18Rik|75180|RIKEN cDNA 4930538K18 gene	BC089614|AU022252|230696|expressed sequence AU022252	NM_001012400|AU022252|230696|expressed sequence AU022252
mm9_v1_chr13_-_4608352_4608430	0.11143	FOX{I1,J2}.p2	U68535|Akr1e1|56043|aldo-keto reductase family 1, member E1	AK002507|Akr1e1|56043|aldo-keto reductase family 1, member E1	AK007924|Akr1e1|56043|aldo-keto reductase family 1, member E1	AK028605|Akr1e1|56043|aldo-keto reductase family 1, member E1	BC012692|Akr1e1|56043|aldo-keto reductase family 1, member E1	NM_018859|Akr1e1|56043|aldo-keto reductase family 1, member E1
mm9_v1_chr2_+_32484995_32485061	0.111211	FOX{I1,J2}.p2	NM_021515|Ak1|11636|adenylate kinase 1	AJ010109|Ak1|11636|adenylate kinase 1	BC054366|Ak1|11636|adenylate kinase 1
mm9_v1_chr4_-_109959185_109959241	0.111134	FOX{I1,J2}.p2	D31953|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	AK014133|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)	DQ437511|Elavl4|15572|ELAV (embryonic lethal, abnormal vision, Drosophila)-like 4 (Hu antigen D)
mm9_v1_chr7_-_148623725_148623772	0.111054	FOX{I1,J2}.p2	BC050887|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22	NM_026646|Slc25a22|68267|solute carrier family 25 (mitochondrial carrier, glutamate), member 22
mm9_v1_chr5_-_139960431_139960476	0.111037	FOX{I1,J2}.p2	NM_001159908|Zfand2a|100494|zinc finger, AN1-type domain 2A	NM_133349|Zfand2a|100494|zinc finger, AN1-type domain 2A
mm9_v1_chr11_-_43561446_43561512	0.110224	FOX{I1,J2}.p2	AK019021|Ttc1|66827|tetratricopeptide repeat domain 1	BC010236|Ttc1|66827|tetratricopeptide repeat domain 1	NM_133795|Ttc1|66827|tetratricopeptide repeat domain 1	AK166431|Ttc1|66827|tetratricopeptide repeat domain 1	AK170032|Ttc1|66827|tetratricopeptide repeat domain 1	AK170230|Ttc1|66827|tetratricopeptide repeat domain 1	AK077715|Ttc1|66827|tetratricopeptide repeat domain 1
mm9_v1_chr19_-_41970627_41970698	0.110011	FOX{I1,J2}.p2	BC062977|Rrp12|107094|ribosomal RNA processing 12 homolog (S. cerevisiae)	NM_199447|Rrp12|107094|ribosomal RNA processing 12 homolog (S. cerevisiae)	AK146550|Rrp12|107094|ribosomal RNA processing 12 homolog (S. cerevisiae)	BC056232|Rrp12|107094|ribosomal RNA processing 12 homolog (S. cerevisiae)
mm9_v1_chr11_+_109334649_109334687	0.109932	FOX{I1,J2}.p2	AK158726|Arsg|74008|arylsulfatase G	NM_028710|Arsg|74008|arylsulfatase G
mm9_v1_chr14_-_60845511_60845640	0.109743	FOX{I1,J2}.p2	AK145818|BC010981|407830|cDNA sequence BC010981
mm9_v1_chr9_+_107838164_107838328	0.109726	FOX{I1,J2}.p2	AK085143|Camkv|235604|CaM kinase-like vesicle-associated	NM_145621|Camkv|235604|CaM kinase-like vesicle-associated	BC017634|Camkv|235604|CaM kinase-like vesicle-associated	BC111033|Camkv|235604|CaM kinase-like vesicle-associated	AK147323|Camkv|235604|CaM kinase-like vesicle-associated	BC022169|Camkv|235604|CaM kinase-like vesicle-associated	BC086762|Camkv|235604|CaM kinase-like vesicle-associated
mm9_v1_chr10_-_124826429_124826542	0.109568	FOX{I1,J2}.p2	
mm9_v1_chr8_+_73053432_73053453	0.109181	FOX{I1,J2}.p2	AB154247|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr6_+_90424727_90424917	0.109032	FOX{I1,J2}.p2	AK185404|Klf15|66277|Kruppel-like factor 15	AK211444|Klf15|66277|Kruppel-like factor 15
mm9_v1_chr13_+_104899869_104899979	0.108982	FOX{I1,J2}.p2	BC017611|Sgtb|218544|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta	NM_144838|Sgtb|218544|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta	AK082080|Sgtb|218544|small glutamine-rich tetratricopeptide repeat (TPR)-containing, beta
mm9_v1_chr7_-_52230179_52230183	0.10842	FOX{I1,J2}.p2	AK035790|Cpt1c|78070|carnitine palmitoyltransferase 1c
mm9_v1_chr12_-_16746933_16747013	0.108406	FOX{I1,J2}.p2	AK045057|Greb1|268527|gene regulated by estrogen in breast cancer protein
mm9_v1_chr3_-_153574996_153575274	0.108086	FOX{I1,J2}.p2	AK160162|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC003948|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC021335|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	AF231926|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	U12922|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC132473|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC138547|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145323|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145324|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145325|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC145326|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	NM_011231|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit	BC057661|Rabggtb|19352|RAB geranylgeranyl transferase, b subunit
mm9_v1_chr13_-_101603189_101603199	0.107696	FOX{I1,J2}.p2	AK166006|Slc30a5|69048|solute carrier family 30 (zinc transporter), member 5
mm9_v1_chr8_+_28153059_28153137	0.107603	FOX{I1,J2}.p2	AK049905|Prosc|114863|proline synthetase co-transcribed	BC047992|Prosc|114863|proline synthetase co-transcribed	AK160172|Prosc|114863|proline synthetase co-transcribed	AK032308|Prosc|114863|proline synthetase co-transcribed	AK134549|Prosc|114863|proline synthetase co-transcribed	AK191605|Prosc|114863|proline synthetase co-transcribed	AK203439|Prosc|114863|proline synthetase co-transcribed
mm9_v1_chr19_+_29441927_29441979	0.107238	FOX{I1,J2}.p2	NM_021893|Cd274|60533|CD274 antigen	BC066841|Cd274|60533|CD274 antigen	AK080003|Cd274|60533|CD274 antigen	AK154403|Cd274|60533|CD274 antigen	AK089307|Cd274|60533|CD274 antigen
mm9_v1_chr1_-_24012436_24012480	0.107028	FOX{I1,J2}.p2	AK003789|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	BC028981|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	AK004301|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	AK007909|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	AK015824|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene	NM_026503|1110058L19Rik|68002|RIKEN cDNA 1110058L19 gene
mm9_v1_chr2_-_35992076_35992223	0.10702	FOX{I1,J2}.p2	AK008110|Rbm18|67889|RNA binding motif protein 18	AK021243|Rbm18|67889|RNA binding motif protein 18	AK036252|Rbm18|67889|RNA binding motif protein 18	BC005540|Rbm18|67889|RNA binding motif protein 18	AK035348|Rbm18|67889|RNA binding motif protein 18	AK036220|Rbm18|67889|RNA binding motif protein 18	AK135109|Rbm18|67889|RNA binding motif protein 18	NM_001159635|Rbm18|67889|RNA binding motif protein 18	NM_026434|Rbm18|67889|RNA binding motif protein 18
mm9_v1_chr11_-_97372344_97372370	0.106999	FOX{I1,J2}.p2	AK051643|Srcin1|56013|SRC kinase signaling inhibitor 1
mm9_v1_chr8_+_107951514_107951547	0.10691	FOX{I1,J2}.p2	AK133042|Lrrc36|270091|leucine rich repeat containing 36	NM_001033371|Lrrc36|270091|leucine rich repeat containing 36	NM_001170789|Lrrc36|270091|leucine rich repeat containing 36	BC150957|Lrrc36|270091|leucine rich repeat containing 36	BC172120|Lrrc36|270091|leucine rich repeat containing 36
mm9_v1_chr7_+_110048855_110048882	0.106663	FOX{I1,J2}.p2	BC116966|Olfr570|259114|olfactory receptor 570	NM_147110|Olfr570|259114|olfactory receptor 570
mm9_v1_chr5_-_139606339_139606437	0.106607	FOX{I1,J2}.p2	AK158994|Prkar1b|19085|protein kinase, cAMP dependent regulatory, type I beta
mm9_v1_chr5_-_92738919_92738964	0.106536	FOX{I1,J2}.p2	AK160646|Sdad1|231452|SDA1 domain containing 1
mm9_v1_chr13_-_70776511_70776699	0.106215	FOX{I1,J2}.p2	AK143610|BC018507|218333|cDNA sequence BC018507	NM_144837|BC018507|218333|cDNA sequence BC018507
mm9_v1_chr8_+_23171187_23171223	0.105888	FOX{I1,J2}.p2	NM_183142|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)	AK157746|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)	AK046475|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)	BC061469|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)	AK134312|Alg11|207958|asparagine-linked glycosylation 11 homolog (yeast, alpha-1,2-mannosyltransferase)
mm9_v1_chr6_+_129483432_129483440	0.105734	FOX{I1,J2}.p2	
mm9_v1_chr6_+_87040212_87040221	0.105492	FOX{I1,J2}.p2	AK013141|Gfpt1|14583|glutamine fructose-6-phosphate transaminase 1
mm9_v1_chr9_+_45715013_45715102	0.105176	FOX{I1,J2}.p2	AK165389|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	AK151980|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	AK148416|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	BC007322|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7	U48830|Pcsk7|18554|proprotein convertase subtilisin/kexin type 7
mm9_v1_chr12_-_85534964_85534979	0.105103	FOX{I1,J2}.p2	AK155547|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene	AK171272|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene	NM_001163502|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene	AK081554|C130039O16Rik|238317|RIKEN cDNA C130039O16 gene
mm9_v1_chr3_+_27883092_27883235	0.105053	FOX{I1,J2}.p2	NM_008875|Pld1|18805|phospholipase D1	BC068144|Pld1|18805|phospholipase D1
mm9_v1_chr16_-_18407565_18407802	0.104637	FOX{I1,J2}.p2	AK084547|Comt|12846|catechol-O-methyltransferase	AK133500|Comt|12846|catechol-O-methyltransferase
mm9_v1_chr9_-_107775031_107775194	0.104461	FOX{I1,J2}.p2	AK145612|Rbm6|19654|RNA binding motif protein 6	AK078712|Rbm6|19654|RNA binding motif protein 6	AK030451|Rbm6|19654|RNA binding motif protein 6	AK077899|Rbm6|19654|RNA binding motif protein 6	AK134164|Rbm6|19654|RNA binding motif protein 6	AK081846|Rbm6|19654|RNA binding motif protein 6	AK164432|Rbm6|19654|RNA binding motif protein 6	AK029954|Rbm6|19654|RNA binding motif protein 6	NM_011251|Rbm6|19654|RNA binding motif protein 6	NM_029169|Rbm6|19654|RNA binding motif protein 6	BC026129|Rbm6|19654|RNA binding motif protein 6
mm9_v1_chr15_+_97077537_97077537	0.104187	FOX{I1,J2}.p2	AK051480|Fam113b|239647|family with sequence similarity 113, member B	NM_172293|Fam113b|239647|family with sequence similarity 113, member B
mm9_v1_chr12_+_45412878_45412942	0.104094	FOX{I1,J2}.p2	AK033938|Pnpla8|67452|patatin-like phospholipase domain containing 8
mm9_v1_chr4_+_151307819_151307875	0.10368	FOX{I1,J2}.p2	NM_172704|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK089983|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK053156|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK156793|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK171781|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	AK172542|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC075619|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC085257|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11	BC079852|Dnajc11|230935|DnaJ (Hsp40) homolog, subfamily C, member 11
mm9_v1_chr10_+_80639371_80639387	0.103484	FOX{I1,J2}.p2	NM_007907|Eef2|13629|eukaryotic translation elongation factor 2
mm9_v1_chr1_-_45560001_45560126	0.103392	FOX{I1,J2}.p2	AK147328|Col5a2|12832|collagen, type V, alpha 2	NM_007737|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr14_-_28321630_28321694	0.103296	FOX{I1,J2}.p2	AK158666|Ccdc66|320234|coiled-coil domain containing 66	BC070471|Ccdc66|320234|coiled-coil domain containing 66	NM_177111|Ccdc66|320234|coiled-coil domain containing 66	AK145297|Ccdc66|320234|coiled-coil domain containing 66	AK170006|Ccdc66|320234|coiled-coil domain containing 66
mm9_v1_chr16_-_98169926_98169967	0.103137	FOX{I1,J2}.p2	AK017406|Zfp295|114565|zinc finger protein 295	AK084920|Zfp295|114565|zinc finger protein 295
mm9_v1_chr2_+_135485242_135485446	0.102705	FOX{I1,J2}.p2	AK148001|Plcb4|18798|phospholipase C, beta 4	AK036896|Plcb4|18798|phospholipase C, beta 4	AK020944|Plcb4|18798|phospholipase C, beta 4	BC089521|Plcb4|18798|phospholipase C, beta 4
mm9_v1_chr6_-_88824037_88824037	0.102151	FOX{I1,J2}.p2	BC033384|Podxl2|319655|podocalyxin-like 2	NM_176973|Podxl2|319655|podocalyxin-like 2
mm9_v1_chr15_-_57723937_57723989	0.102054	FOX{I1,J2}.p2	AK152901|Derl1|67819|Der1-like domain family, member 1	AK148018|Derl1|67819|Der1-like domain family, member 1	AK152197|Derl1|67819|Der1-like domain family, member 1	AK043420|Derl1|67819|Der1-like domain family, member 1	NM_024207|Derl1|67819|Der1-like domain family, member 1	AK007435|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr16_-_28929698_28929810	0.101912	FOX{I1,J2}.p2	BC085092|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene	BC068245|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene	NM_177718|1600021P15Rik|239796|RIKEN cDNA 1600021P15 gene
mm9_v1_chr7_+_88005861_88005865	0.1019	FOX{I1,J2}.p2	AK147779|Zscan2|22691|zinc finger and SCAN domain containing 2
mm9_v1_chr2_-_173044305_173044431	0.101846	FOX{I1,J2}.p2	AK008179|Zbp1|58203|Z-DNA binding protein 1	AX775969|Zbp1|58203|Z-DNA binding protein 1	AX775971|Zbp1|58203|Z-DNA binding protein 1	AF136520|Zbp1|58203|Z-DNA binding protein 1	BC020033|Zbp1|58203|Z-DNA binding protein 1	AK157215|Zbp1|58203|Z-DNA binding protein 1	NM_001139519|Zbp1|58203|Z-DNA binding protein 1	NM_021394|Zbp1|58203|Z-DNA binding protein 1
mm9_v1_chr17_-_36169573_36169660	0.101705	FOX{I1,J2}.p2	AF100699|H2-T23|15040|histocompatibility 2, T region locus 23	AF100700|H2-T23|15040|histocompatibility 2, T region locus 23	AF100702|H2-T23|15040|histocompatibility 2, T region locus 23	AF057279|H2-T23|15040|histocompatibility 2, T region locus 23	AF082510|H2-T23|15040|histocompatibility 2, T region locus 23	BC099472|H2-T23|15040|histocompatibility 2, T region locus 23	AB359230|H2-T23|15040|histocompatibility 2, T region locus 23	AK133502|H2-T23|15040|histocompatibility 2, T region locus 23	M11284|H2-T23|15040|histocompatibility 2, T region locus 23	NM_010398|H2-T23|15040|histocompatibility 2, T region locus 23
mm9_v1_chr4_+_150302107_150302108	0.101703	FOX{I1,J2}.p2	NM_001077509|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9	AK154625|Tnfrsf9|21942|tumor necrosis factor receptor superfamily, member 9
mm9_v1_chr6_-_38825815_38825951	0.101426	FOX{I1,J2}.p2	AF333791|Hipk2|15258|homeodomain interacting protein kinase 2	AF333792|Hipk2|15258|homeodomain interacting protein kinase 2	AF273680|Hipk2|15258|homeodomain interacting protein kinase 2	BC031904|Hipk2|15258|homeodomain interacting protein kinase 2	AF170301|Hipk2|15258|homeodomain interacting protein kinase 2	AF170302|Hipk2|15258|homeodomain interacting protein kinase 2	AF077659|Hipk2|15258|homeodomain interacting protein kinase 2
mm9_v1_chr1_-_13364092_13364163	0.100518	FOX{I1,J2}.p2	AF000582|Ncoa2|17978|nuclear receptor coactivator 2	AK048972|Ncoa2|17978|nuclear receptor coactivator 2	AK087443|Ncoa2|17978|nuclear receptor coactivator 2	U39060|Ncoa2|17978|nuclear receptor coactivator 2	AK052117|Ncoa2|17978|nuclear receptor coactivator 2	NM_001077695|Ncoa2|17978|nuclear receptor coactivator 2	NM_008678|Ncoa2|17978|nuclear receptor coactivator 2
mm9_v1_chr11_-_77990112_77990142	0.100325	FOX{I1,J2}.p2	BC057995|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8	AK079149|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8	BC070457|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8	AF407579|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8	AK154358|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8	AK014546|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8
mm9_v1_chr16_+_96689206_96689212	0.100169	FOX{I1,J2}.p2	BC061164|Pcp4|18546|Purkinje cell protein 4	NM_008791|Pcp4|18546|Purkinje cell protein 4
mm9_v1_chr5_+_118426792_118426794	0.100042	FOX{I1,J2}.p2	AB093270|Fbxo21|231670|F-box protein 21
mm9_v1_chr11_-_20612281_20612323	0.0998388	FOX{I1,J2}.p2	AK150458|Aftph|216549|aftiphilin	AK152308|Aftph|216549|aftiphilin	AK152487|Aftph|216549|aftiphilin	AK161532|Aftph|216549|aftiphilin
mm9_v1_chr4_+_97439255_97439362	0.099779	FOX{I1,J2}.p2	AK037386|A130013F12Rik|320308|RIKEN cDNA A130013F12 gene	D90174|Nfia|18027|nuclear factor I/A
mm9_v1_chr12_-_103151331_103151476	0.0994987	FOX{I1,J2}.p2	AK077954|Trip11|109181|thyroid hormone receptor interactor 11	AK081763|Trip11|109181|thyroid hormone receptor interactor 11	AK014103|Trip11|109181|thyroid hormone receptor interactor 11	AK148294|Trip11|109181|thyroid hormone receptor interactor 11	AK012112|Trip11|109181|thyroid hormone receptor interactor 11	NM_028446|Trip11|109181|thyroid hormone receptor interactor 11	BC158098|Trip11|109181|thyroid hormone receptor interactor 11
mm9_v1_chr2_+_150574777_150574886	0.0994777	FOX{I1,J2}.p2	AK030789|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	NM_172117|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	BC038126|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	BC028318|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6	AK156685|Entpd6|12497|ectonucleoside triphosphate diphosphohydrolase 6
mm9_v1_chr12_-_42212337_42212337	0.09936	FOX{I1,J2}.p2	BC069041|Lrrn3|16981|leucine rich repeat protein 3, neuronal	NM_010733|Lrrn3|16981|leucine rich repeat protein 3, neuronal
mm9_v1_chr14_-_25306261_25306271	0.0990265	FOX{I1,J2}.p2	NM_001081247|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A	AK170475|Polr3a|218832|polymerase (RNA) III (DNA directed) polypeptide A
mm9_v1_chr12_+_85029101_85029215	0.0987579	FOX{I1,J2}.p2	BC014744|Psen1|19164|presenilin 1	BC071233|Psen1|19164|presenilin 1	AK134615|Psen1|19164|presenilin 1	AK148101|Psen1|19164|presenilin 1	AK165984|Psen1|19164|presenilin 1	L42177|Psen1|19164|presenilin 1	AK134232|Psen1|19164|presenilin 1	BC030409|Psen1|19164|presenilin 1
mm9_v1_chr4_+_144483110_144483188	0.0985243	FOX{I1,J2}.p2	AK087137|Dhrs3|20148|dehydrogenase/reductase (SDR family) member 3
mm9_v1_chrX_+_45976650_45976756	0.0985041	FOX{I1,J2}.p2	AF076981|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF535150|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	AF535151|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14	NM_011398|Slc25a14|20523|solute carrier family 25 (mitochondrial carrier, brain), member 14
mm9_v1_chr13_+_67274117_67274142	0.0984973	FOX{I1,J2}.p2	NM_001013769|Rsl1|380855|regulator of sex limited protein 1	AK164698|Rsl1|380855|regulator of sex limited protein 1	BC103788|Rsl1|380855|regulator of sex limited protein 1
mm9_v1_chr1_+_51345952_51345993	0.0981668	FOX{I1,J2}.p2	AK035324|Sdpr|20324|serum deprivation response	BC027005|Sdpr|20324|serum deprivation response	NM_138741|Sdpr|20324|serum deprivation response	AK132324|Sdpr|20324|serum deprivation response
mm9_v1_chr11_-_51799215_51799347	0.0980237	FOX{I1,J2}.p2	AK190260|Ube2b|22210|ubiquitin-conjugating enzyme E2B, RAD6 homology (S. cerevisiae)
mm9_v1_chr17_-_37095372_37095414	0.0979243	FOX{I1,J2}.p2	AK003714|Znrd1|66136|zinc ribbon domain containing, 1	NM_023162|Znrd1|66136|zinc ribbon domain containing, 1	BC043016|Znrd1|66136|zinc ribbon domain containing, 1
mm9_v1_chr5_+_130647678_130647743	0.097794	FOX{I1,J2}.p2	NM_001199059|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1	AF093590|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1	AK146734|Rabgef1|56715|RAB guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr5_-_144670646_144670709	0.097766	FOX{I1,J2}.p2	BC026958|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC024410|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC026972|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	BC024480|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	NM_001172146|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2	NM_146165|Aimp2|231872|aminoacyl tRNA synthetase complex-interacting multifunctional protein 2
mm9_v1_chr13_-_67006250_67006288	0.0977636	FOX{I1,J2}.p2	AK008455|Uqcrb|67530|ubiquinol-cytochrome c reductase binding protein	AK018769|Uqcrb|67530|ubiquinol-cytochrome c reductase binding protein	AK168361|Uqcrb|67530|ubiquinol-cytochrome c reductase binding protein	BC086921|Uqcrb|67530|ubiquinol-cytochrome c reductase binding protein	BC100601|Uqcrb|67530|ubiquinol-cytochrome c reductase binding protein	AK168855|Uqcrb|67530|ubiquinol-cytochrome c reductase binding protein	BC031607|Uqcrb|67530|ubiquinol-cytochrome c reductase binding protein	AK008945|Uqcrb|67530|ubiquinol-cytochrome c reductase binding protein	NM_026219|Uqcrb|67530|ubiquinol-cytochrome c reductase binding protein
mm9_v1_chr5_+_108026714_108026792	0.0977135	FOX{I1,J2}.p2	AK034418|Rpap2|231571|RNA polymerase II associated protein 2	AK161901|Rpap2|231571|RNA polymerase II associated protein 2	NM_001163461|Rpap2|231571|RNA polymerase II associated protein 2	NM_144911|Rpap2|231571|RNA polymerase II associated protein 2	AK145830|Rpap2|231571|RNA polymerase II associated protein 2	BC021895|Rpap2|231571|RNA polymerase II associated protein 2	AK166574|Rpap2|231571|RNA polymerase II associated protein 2
mm9_v1_chr4_+_147242922_147243087	0.0974736	FOX{I1,J2}.p2	NM_010244|Fv1|14349|Friend virus susceptibility 1
mm9_v1_chr10_+_127759711_127759783	0.0973211	FOX{I1,J2}.p2	AK213625|Cnpy2|56530|canopy 2 homolog (zebrafish)	BC008261|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK007914|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK013568|Cnpy2|56530|canopy 2 homolog (zebrafish)	AK180663|Cnpy2|56530|canopy 2 homolog (zebrafish)
mm9_v1_chr12_-_47919695_47919761	0.0971935	FOX{I1,J2}.p2	AF232828|Nova1|664883|neuro-oncological ventral antigen 1	NM_021361|Nova1|664883|neuro-oncological ventral antigen 1
mm9_v1_chr10_-_127520025_127520063	0.0969051	FOX{I1,J2}.p2	
mm9_v1_chr7_+_107685608_107685745	0.0965224	FOX{I1,J2}.p2	AK161506|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	NM_183270|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	AK019895|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	AK088786|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC116995|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC116997|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC096605|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	AK008883|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8	BC048574|Chchd8|68185|coiled-coil-helix-coiled-coil-helix domain containing 8
mm9_v1_chr12_+_56404242_56404258	0.0962995	FOX{I1,J2}.p2	AK031144|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene	AK045434|1110008L16Rik|66132|RIKEN cDNA 1110008L16 gene
mm9_v1_chr8_-_96560811_96560953	0.0962402	FOX{I1,J2}.p2	AK204985|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC090834|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK146419|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK160147|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK012308|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK020150|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK019433|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK147061|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	BC008270|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	AK011688|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21	NM_026623|Nudt21|68219|nudix (nucleoside diphosphate linked moiety X)-type motif 21
mm9_v1_chr6_+_77192839_77192971	0.0958781	FOX{I1,J2}.p2	BC027803|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr5_-_87997908_87998005	0.0957093	FOX{I1,J2}.p2	AF026073|Sult1d1|53315|sulfotransferase family 1D, member 1	AK133530|Sult1d1|53315|sulfotransferase family 1D, member 1	U32371|Sult1d1|53315|sulfotransferase family 1D, member 1	BC066190|Sult1d1|53315|sulfotransferase family 1D, member 1	BC010752|Sult1d1|53315|sulfotransferase family 1D, member 1
mm9_v1_chr11_+_119961534_119961626	0.0956773	FOX{I1,J2}.p2	
mm9_v1_chr11_+_53138176_53138190	0.0955001	FOX{I1,J2}.p2	AK010803|Zcchc10|67966|zinc finger, CCHC domain containing 10	AK027985|Zcchc10|67966|zinc finger, CCHC domain containing 10	BC025078|Zcchc10|67966|zinc finger, CCHC domain containing 10	AK020177|Zcchc10|67966|zinc finger, CCHC domain containing 10	AK169856|Zcchc10|67966|zinc finger, CCHC domain containing 10	BC087902|Zcchc10|67966|zinc finger, CCHC domain containing 10	NM_026479|Zcchc10|67966|zinc finger, CCHC domain containing 10
mm9_v1_chr16_+_17619441_17619473	0.0954928	FOX{I1,J2}.p2	AK019466|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164609|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164610|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_001164611|Smpd4|77626|sphingomyelin phosphodiesterase 4	NM_029945|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK031685|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK031029|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK036380|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK035892|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK036055|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK164234|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK129354|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK138720|Smpd4|77626|sphingomyelin phosphodiesterase 4	AK164456|Smpd4|77626|sphingomyelin phosphodiesterase 4	BC026767|Smpd4|77626|sphingomyelin phosphodiesterase 4
mm9_v1_chr17_-_12888210_12888210	0.0954583	FOX{I1,J2}.p2	AK053045|Igf2r|16004|insulin-like growth factor 2 receptor
mm9_v1_chr17_-_24769511_24769537	0.0953285	FOX{I1,J2}.p2	AK147302|Tsc2|22084|tuberous sclerosis 2	AK148072|Tsc2|22084|tuberous sclerosis 2	AK147874|Tsc2|22084|tuberous sclerosis 2
mm9_v1_chr2_+_34729973_34730037	0.0951613	FOX{I1,J2}.p2	AK021330|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene	BC021771|D730039F16Rik|77996|RIKEN cDNA D730039F16 gene
mm9_v1_chr5_+_115392192_115392243	0.0949969	FOX{I1,J2}.p2	AK135000|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene	BC031162|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene	NM_028211|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene	AK008740|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene	AK159360|2210016L21Rik|72357|RIKEN cDNA 2210016L21 gene
mm9_v1_chr9_-_110959315_110959476	0.0949442	FOX{I1,J2}.p2	AJ318863|Ccrl2|54199|chemokine (C-C motif) receptor-like 2	AF316576|Ccrl2|54199|chemokine (C-C motif) receptor-like 2
mm9_v1_chr19_-_41674337_41674343	0.0949343	FOX{I1,J2}.p2	
mm9_v1_chrX_-_133277456_133277461	0.0948661	FOX{I1,J2}.p2	NM_001168227|Morf4l2|56397|mortality factor 4 like 2
mm9_v1_chr17_+_74154214_74154436	0.0947717	FOX{I1,J2}.p2	AK051717|Ehd3|57440|EH-domain containing 3	AF506002|Ehd3|57440|EH-domain containing 3	BC046596|Ehd3|57440|EH-domain containing 3
mm9_v1_chr2_-_93997994_93998073	0.0945831	FOX{I1,J2}.p2	BC037620|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	BC090659|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	BC010749|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AF064635|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK076088|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK150849|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK152489|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK166027|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK081869|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK082715|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK088521|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK167908|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	AK078841|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12	NM_019657|Hsd17b12|56348|hydroxysteroid (17-beta) dehydrogenase 12
mm9_v1_chr8_-_19893102_19893120	0.0943801	FOX{I1,J2}.p2	AK030539|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK088897|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene
mm9_v1_chr15_+_57743727_57743856	0.0940491	FOX{I1,J2}.p2	NM_001081396|Wdr67|210544|WD repeat domain 67	NM_001167679|Wdr67|210544|WD repeat domain 67	AB185844|Wdr67|210544|WD repeat domain 67	AK154264|Wdr67|210544|WD repeat domain 67	AK171024|Wdr67|210544|WD repeat domain 67	BC050039|Wdr67|210544|WD repeat domain 67	BC066830|Wdr67|210544|WD repeat domain 67
mm9_v1_chr3_+_89856713_89856975	0.0939996	FOX{I1,J2}.p2	NM_025762|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	NM_027500|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK034749|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150324|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150423|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK150831|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK151002|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK151263|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK017833|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	BC018438|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK051238|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	BC027190|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AK214769|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene	AY533135|4933434E20Rik|99650|RIKEN cDNA 4933434E20 gene
mm9_v1_chr1_-_65003291_65003407	0.0939159	FOX{I1,J2}.p2	AK034959|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	BC063098|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3	NM_001039493|Plekhm3|241075|pleckstrin homology domain containing, family M, member 3
mm9_v1_chr1_+_19202046_19202134	0.0937469	FOX{I1,J2}.p2	AK032045|Tcfap2b|21419|transcription factor AP-2 beta	NM_001025305|Tcfap2b|21419|transcription factor AP-2 beta
mm9_v1_chr2_-_87990239_87990239	0.093382	FOX{I1,J2}.p2	BC119292|Olfr1167|258291|olfactory receptor 1167	BC137817|Olfr1167|258291|olfactory receptor 1167	NM_146294|Olfr1167|258291|olfactory receptor 1167
mm9_v1_chr2_+_30006546_30006566	0.0933541	FOX{I1,J2}.p2	AK011204|Tbc1d13|70296|TBC1 domain family, member 13
mm9_v1_chr14_+_22569752_22569797	0.0932497	FOX{I1,J2}.p2	AK006211|Samd8|67630|sterile alpha motif domain containing 8	NM_026283|Samd8|67630|sterile alpha motif domain containing 8	BC116745|Samd8|67630|sterile alpha motif domain containing 8	BC116747|Samd8|67630|sterile alpha motif domain containing 8	AK015593|Samd8|67630|sterile alpha motif domain containing 8	BC100476|Samd8|67630|sterile alpha motif domain containing 8
mm9_v1_chr13_+_77847947_77848021	0.0932198	FOX{I1,J2}.p2	NM_001163419|Fam172a|68675|family with sequence similarity 172, member A	NM_001163420|Fam172a|68675|family with sequence similarity 172, member A	NM_138312|Fam172a|68675|family with sequence similarity 172, member A	AK165273|Fam172a|68675|family with sequence similarity 172, member A	AK052419|Fam172a|68675|family with sequence similarity 172, member A	AK166285|Fam172a|68675|family with sequence similarity 172, member A	BC057380|Fam172a|68675|family with sequence similarity 172, member A	AK049727|Fam172a|68675|family with sequence similarity 172, member A	AF064782|Fam172a|68675|family with sequence similarity 172, member A	AK081188|Fam172a|68675|family with sequence similarity 172, member A
mm9_v1_chr7_-_116073666_116073691	0.0930914	FOX{I1,J2}.p2	AK032446|Nlrp10|244202|NLR family, pyrin domain containing 10	BC113194|Nlrp10|244202|NLR family, pyrin domain containing 10	BC113801|Nlrp10|244202|NLR family, pyrin domain containing 10	AK028802|Nlrp10|244202|NLR family, pyrin domain containing 10	NM_175532|Nlrp10|244202|NLR family, pyrin domain containing 10	AK028575|Nlrp10|244202|NLR family, pyrin domain containing 10
mm9_v1_chr19_+_45122065_45122176	0.0926594	FOX{I1,J2}.p2	NM_001178012|Sfxn3|94280|sideroflexin 3	NM_001178013|Sfxn3|94280|sideroflexin 3	NM_053197|Sfxn3|94280|sideroflexin 3	BC012208|Sfxn3|94280|sideroflexin 3
mm9_v1_chr3_+_154259658_154259674	0.0925587	FOX{I1,J2}.p2	AK133820|Cryz|12972|crystallin, zeta
mm9_v1_chr5_-_123183255_123183351	0.0924266	FOX{I1,J2}.p2	AK050846|Camkk2|207565|calcium/calmodulin-dependent protein kinase kinase 2, beta
mm9_v1_chr17_-_65890082_65890121	0.0923811	FOX{I1,J2}.p2	BC150885|Tmem232|381107|transmembrane protein 232	BC172032|Tmem232|381107|transmembrane protein 232	AF338469|Tmem232|381107|transmembrane protein 232	NM_001008973|Tmem232|381107|transmembrane protein 232
mm9_v1_chr17_+_26389911_26389996	0.0923738	FOX{I1,J2}.p2	BC055875|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	BC019194|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK211801|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like
mm9_v1_chr12_+_25741653_25741728	0.092196	FOX{I1,J2}.p2	BC059030|Kidins220|77480|kinase D-interacting substrate 220
mm9_v1_chr5_-_86539474_86539529	0.0921934	FOX{I1,J2}.p2	AK017687|Uba6|231380|ubiquitin-like modifier activating enzyme 6
mm9_v1_chr5_+_130292873_130292891	0.0921148	FOX{I1,J2}.p2	AK149757|Cct6a|12466|chaperonin containing Tcp1, subunit 6a (zeta)
mm9_v1_chr4_+_41707315_41707331	0.091347	FOX{I1,J2}.p2	NM_001163401|Il11ra1|16157|interleukin 11 receptor, alpha chain 1	NM_001172054|Il11ra1|16157|interleukin 11 receptor, alpha chain 1
mm9_v1_chr16_+_38742446_38742523	0.0913161	FOX{I1,J2}.p2	AK041692|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4	AK136637|B4galt4|56375|UDP-Gal:betaGlcNAc beta 1,4-galactosyltransferase, polypeptide 4
mm9_v1_chr8_-_3467624_3467679	0.0912503	FOX{I1,J2}.p2	BC062135|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	AK007848|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	AK007582|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	NM_026951|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	AK165461|Pex11c|69129|peroxisomal biogenesis factor 11 gamma	BC024096|Pex11c|69129|peroxisomal biogenesis factor 11 gamma
mm9_v1_chr11_-_58615400_58615517	0.0909041	FOX{I1,J2}.p2	FJ468008|Fam183b|75429|family with sequence similarity 183, member B	BC094630|Fam183b|75429|family with sequence similarity 183, member B	BC061254|Fam183b|75429|family with sequence similarity 183, member B	BC048748|Fam183b|75429|family with sequence similarity 183, member B	AK157972|Fam183b|75429|family with sequence similarity 183, member B	AK013920|Fam183b|75429|family with sequence similarity 183, member B	NM_001162878|Fam183b|75429|family with sequence similarity 183, member B	NM_029283|Fam183b|75429|family with sequence similarity 183, member B	BC126964|Fam183b|75429|family with sequence similarity 183, member B	BC117741|Fam183b|75429|family with sequence similarity 183, member B
mm9_v1_chr12_-_85741801_85741813	0.0908525	FOX{I1,J2}.p2	AK079267|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5	AK002618|Entpd5|12499|ectonucleoside triphosphate diphosphohydrolase 5
mm9_v1_chr2_+_4897167_4897179	0.0907323	FOX{I1,J2}.p2	EU368184|Ucma|68527|upper zone of growth plate and cartilage matrix associated	NM_001113558|Ucma|68527|upper zone of growth plate and cartilage matrix associated	NM_001165932|Ucma|68527|upper zone of growth plate and cartilage matrix associated	NM_026754|Ucma|68527|upper zone of growth plate and cartilage matrix associated
mm9_v1_chr2_+_76244603_76244617	0.090328	FOX{I1,J2}.p2	AK037703|Osbpl6|99031|oxysterol binding protein-like 6	AK157944|Osbpl6|99031|oxysterol binding protein-like 6	AK220498|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr10_-_126558207_126558220	0.0900781	FOX{I1,J2}.p2	NM_001171026|Os9|216440|amplified in osteosarcoma	NM_177614|Os9|216440|amplified in osteosarcoma
mm9_v1_chr11_+_90110825_90110834	0.0899503	FOX{I1,J2}.p2	AK011418|Mmd|67468|monocyte to macrophage differentiation-associated
mm9_v1_chr11_-_48927255_48927258	0.0899136	FOX{I1,J2}.p2	BC110470|Olfr1396|258334|olfactory receptor 1396	BC110471|Olfr1396|258334|olfactory receptor 1396	NM_146337|Olfr1396|258334|olfactory receptor 1396
mm9_v1_chr10_+_128787620_128787620	0.0898316	FOX{I1,J2}.p2	NM_001011797|Olfr782|257985|olfactory receptor 782
mm9_v1_chr11_+_43534658_43534687	0.0898214	FOX{I1,J2}.p2	AK086604|Pwwp2a|70802|PWWP domain containing 2A	AK039984|Pwwp2a|70802|PWWP domain containing 2A
mm9_v1_chr16_+_22920486_22920556	0.0897343	FOX{I1,J2}.p2	AY138460|Fetub|59083|fetuin beta	BC018341|Fetub|59083|fetuin beta
mm9_v1_chr4_+_129190824_129190856	0.0897313	FOX{I1,J2}.p2	NM_010807|Marcksl1|17357|MARCKS-like 1
mm9_v1_chr7_+_135390325_135390446	0.0897269	FOX{I1,J2}.p2	DQ143891|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	BC056362|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1	NM_009365|Tgfb1i1|21804|transforming growth factor beta 1 induced transcript 1
mm9_v1_chr9_+_65246294_65246323	0.0895658	FOX{I1,J2}.p2	NM_001033158|Rasl12|70784|RAS-like, family 12	NM_001162923|Rasl12|70784|RAS-like, family 12	AK087136|Rasl12|70784|RAS-like, family 12	BC125036|Rasl12|70784|RAS-like, family 12
mm9_v1_chr9_-_119932620_119932715	0.0894304	FOX{I1,J2}.p2	BC117959|Xirp1|22437|xin actin-binding repeat containing 1	BC117960|Xirp1|22437|xin actin-binding repeat containing 1	AF051945|Xirp1|22437|xin actin-binding repeat containing 1	NM_011724|Xirp1|22437|xin actin-binding repeat containing 1
mm9_v1_chr3_+_59835700_59835727	0.0893219	FOX{I1,J2}.p2	NM_023383|Aadac|67758|arylacetamide deacetylase (esterase)	AK008244|Aadac|67758|arylacetamide deacetylase (esterase)	BC054823|Aadac|67758|arylacetamide deacetylase (esterase)	BC019999|Aadac|67758|arylacetamide deacetylase (esterase)
mm9_v1_chr14_-_37938397_37938468	0.0891635	FOX{I1,J2}.p2	AK210138|Ghitm|66092|growth hormone inducible transmembrane protein
mm9_v1_chr16_-_38445988_38446143	0.0890034	FOX{I1,J2}.p2	AK003751|Adprh|11544|ADP-ribosylarginine hydrolase
mm9_v1_chr13_-_29043617_29043693	0.0889454	FOX{I1,J2}.p2	AK051540|Sox4|20677|SRY-box containing gene 4
mm9_v1_chr2_+_155969888_155969997	0.0877806	FOX{I1,J2}.p2	NM_001164216|Romo1|67067|reactive oxygen species modulator 1	AK008300|Romo1|67067|reactive oxygen species modulator 1	NM_001164215|Romo1|67067|reactive oxygen species modulator 1	NM_001164217|Romo1|67067|reactive oxygen species modulator 1	AK003488|Romo1|67067|reactive oxygen species modulator 1	BC028749|Romo1|67067|reactive oxygen species modulator 1
mm9_v1_chr3_+_108162958_108162998	0.0877259	FOX{I1,J2}.p2	
mm9_v1_chr18_+_67293403_67293479	0.0874986	FOX{I1,J2}.p2	AK032407|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type	AY179169|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type	NM_010307|Gnal|14680|guanine nucleotide binding protein, alpha stimulating, olfactory type
mm9_v1_chr18_+_80315134_80315153	0.0872321	FOX{I1,J2}.p2	AK010699|Pard6g|93737|par-6 partitioning defective 6 homolog gamma (C. elegans)
mm9_v1_chr1_-_75274890_75274917	0.0871596	FOX{I1,J2}.p2	FJ621497|Resp18|19711|regulated endocrine-specific protein 18	AK019440|Resp18|19711|regulated endocrine-specific protein 18	AK012477|Resp18|19711|regulated endocrine-specific protein 18	BC027535|Resp18|19711|regulated endocrine-specific protein 18
mm9_v1_chr15_+_75799550_75799614	0.0868185	FOX{I1,J2}.p2	AK137962|Zfp707|69020|zinc finger protein 707	NM_001081065|Zfp707|69020|zinc finger protein 707
mm9_v1_chr16_+_20589654_20589675	0.0867884	FOX{I1,J2}.p2	AK141799|Vwa5b2|328643|von Willebrand factor A domain containing 5B2	NM_001144953|Vwa5b2|328643|von Willebrand factor A domain containing 5B2	NM_182636|Vwa5b2|328643|von Willebrand factor A domain containing 5B2
mm9_v1_chr10_-_114622068_114622080	0.0865046	FOX{I1,J2}.p2	BC120514|Tph2|216343|tryptophan hydroxylase 2	BC125430|Tph2|216343|tryptophan hydroxylase 2	AY090565|Tph2|216343|tryptophan hydroxylase 2	NM_173391|Tph2|216343|tryptophan hydroxylase 2
mm9_v1_chr14_-_73725413_73725527	0.0861562	FOX{I1,J2}.p2	DQ400415|Rb1|19645|retinoblastoma 1
mm9_v1_chr7_+_148127289_148127427	0.0858414	FOX{I1,J2}.p2	AK171694|Athl1|212974|ATH1, acid trehalase-like 1 (yeast)
mm9_v1_chr16_-_34262988_34262995	0.0858337	FOX{I1,J2}.p2	AK164180|Kalrn|545156|kalirin, RhoGEF kinase
mm9_v1_chr10_-_22451738_22451780	0.0854786	FOX{I1,J2}.p2	AK005604|Tbpl1|237336|TATA box binding protein-like 1
mm9_v1_chr1_-_4350323_4350394	0.084852	FOX{I1,J2}.p2	BC038794|Rp1|19888|retinitis pigmentosa 1 (human)	BC120927|Rp1|19888|retinitis pigmentosa 1 (human)	BC120928|Rp1|19888|retinitis pigmentosa 1 (human)	AF155141|Rp1|19888|retinitis pigmentosa 1 (human)	AK044413|Rp1|19888|retinitis pigmentosa 1 (human)	BC096607|Rp1|19888|retinitis pigmentosa 1 (human)	NM_011283|Rp1|19888|retinitis pigmentosa 1 (human)
mm9_v1_chr16_-_96343290_96343364	0.0846352	FOX{I1,J2}.p2	
mm9_v1_chr15_+_99532698_99532771	0.0842128	FOX{I1,J2}.p2	NM_031842|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC059921|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	M25773|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	U66620|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1	BC079839|Smarcd1|83797|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1
mm9_v1_chr3_-_113332817_113333068	0.0841374	FOX{I1,J2}.p2	AK173272|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK179549|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK187884|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK084372|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK013288|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK161974|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK163729|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK134241|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	BC043695|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	AK161063|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	NM_001038696|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3	NM_026043|Rnpc3|67225|RNA-binding region (RNP1, RRM) containing 3
mm9_v1_chr11_-_69485842_69485924	0.0840208	FOX{I1,J2}.p2	NM_001159375|Eif4a1|13681|eukaryotic translation initiation factor 4A1	NM_144958|Eif4a1|13681|eukaryotic translation initiation factor 4A1
mm9_v1_chr11_-_102266342_102266375	0.0838977	FOX{I1,J2}.p2	AK211485|Slc25a39|68066|solute carrier family 25, member 39
mm9_v1_chr11_-_120489993_120490076	0.0831961	FOX{I1,J2}.p2	AK038934|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)	AK083165|Mafg|17134|v-maf musculoaponeurotic fibrosarcoma oncogene family, protein G (avian)
mm9_v1_chr1_+_176066876_176066876	0.0830429	FOX{I1,J2}.p2	BC104096|Olfr424|258716|olfactory receptor 424	BC104097|Olfr424|258716|olfactory receptor 424	NM_146721|Olfr424|258716|olfactory receptor 424
mm9_v1_chr5_-_124199380_124199422	0.0824345	FOX{I1,J2}.p2	BC008229|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK012697|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK077854|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK166941|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK168476|Rsrc2|208606|arginine/serine-rich coiled-coil 2	AK017771|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005523|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_001005525|Rsrc2|208606|arginine/serine-rich coiled-coil 2	NM_025438|Rsrc2|208606|arginine/serine-rich coiled-coil 2
mm9_v1_chr1_+_174048400_174048426	0.082364	FOX{I1,J2}.p2	BC005609|Copa|12847|coatomer protein complex subunit alpha
mm9_v1_chr2_-_60589953_60589966	0.0822873	FOX{I1,J2}.p2	AK143579|Rbms1|56878|RNA binding motif, single stranded interacting protein 1	AK169352|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr4_+_128365981_128366038	0.082147	FOX{I1,J2}.p2	NM_018774|Phc2|54383|polyhomeotic-like 2 (Drosophila)	BC057571|Phc2|54383|polyhomeotic-like 2 (Drosophila)
mm9_v1_chr2_+_34262301_34262360	0.0820727	FOX{I1,J2}.p2	AK132263|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr9_-_103125934_103125973	0.0820131	FOX{I1,J2}.p2	BC018573|Trf|22041|transferrin
mm9_v1_chr19_+_18745776_18745818	0.0818468	FOX{I1,J2}.p2	AK178550|2410127L17Rik|67383|RIKEN cDNA 2410127L17 gene	AK182869|2410127L17Rik|67383|RIKEN cDNA 2410127L17 gene
mm9_v1_chr11_-_73661624_73661624	0.0816466	FOX{I1,J2}.p2	NM_147008|Olfr393|259010|olfactory receptor 393
mm9_v1_chr3_+_87723453_87723493	0.0815577	FOX{I1,J2}.p2	AK003362|Mrpl24|67707|mitochondrial ribosomal protein L24	AK019976|Mrpl24|67707|mitochondrial ribosomal protein L24	AK020157|Mrpl24|67707|mitochondrial ribosomal protein L24	NM_026591|Mrpl24|67707|mitochondrial ribosomal protein L24	AK013394|Mrpl24|67707|mitochondrial ribosomal protein L24	AK016190|Mrpl24|67707|mitochondrial ribosomal protein L24	BC031730|Mrpl24|67707|mitochondrial ribosomal protein L24
mm9_v1_chr14_+_41964744_41964800	0.0813174	FOX{I1,J2}.p2	NM_010775|Mbl1|17194|mannose-binding lectin (protein A) 1	S42292|Mbl1|17194|mannose-binding lectin (protein A) 1	AK034788|Mbl1|17194|mannose-binding lectin (protein A) 1	BC012245|Mbl1|17194|mannose-binding lectin (protein A) 1	BC021762|Mbl1|17194|mannose-binding lectin (protein A) 1	D11441|Mbl1|17194|mannose-binding lectin (protein A) 1
mm9_v1_chr14_+_32481114_32481230	0.0810513	FOX{I1,J2}.p2	AK189055|Btd|26363|biotinidase
mm9_v1_chr11_-_74148730_74148730	0.0806015	FOX{I1,J2}.p2	NM_146707|Olfr410|258702|olfactory receptor 410
mm9_v1_chr15_-_57723993_57724037	0.0805271	FOX{I1,J2}.p2	AK011499|Derl1|67819|Der1-like domain family, member 1	AK161702|Derl1|67819|Der1-like domain family, member 1	BC003454|Derl1|67819|Der1-like domain family, member 1	BC085490|Derl1|67819|Der1-like domain family, member 1
mm9_v1_chr4_+_137263376_137263436	0.0805228	FOX{I1,J2}.p2	AK019076|Rap1gap|110351|Rap1 GTPase-activating protein
mm9_v1_chr3_-_108229641_108229684	0.0804287	FOX{I1,J2}.p2	
mm9_v1_chr4_-_4720451_4720507	0.0803979	FOX{I1,J2}.p2	BC048776|Impad1|242291|inositol monophosphatase domain containing 1	NM_177730|Impad1|242291|inositol monophosphatase domain containing 1	AK045511|Impad1|242291|inositol monophosphatase domain containing 1
mm9_v1_chr9_-_7872896_7873169	0.0799873	FOX{I1,J2}.p2	AK172636|Birc3|11796|baculoviral IAP repeat-containing 3	BC011338|Birc3|11796|baculoviral IAP repeat-containing 3	U88908|Birc3|11796|baculoviral IAP repeat-containing 3	AK162108|Birc3|11796|baculoviral IAP repeat-containing 3	NM_007464|Birc3|11796|baculoviral IAP repeat-containing 3
mm9_v1_chr5_-_139960370_139960390	0.0798638	FOX{I1,J2}.p2	BC058780|Zfand2a|100494|zinc finger, AN1-type domain 2A	AK146082|Zfand2a|100494|zinc finger, AN1-type domain 2A	AK171245|Zfand2a|100494|zinc finger, AN1-type domain 2A
mm9_v1_chr1_-_58480910_58480931	0.0795235	FOX{I1,J2}.p2	NM_001042634|Clk1|12747|CDC-like kinase 1
mm9_v1_chr16_-_56690646_56690662	0.079317	FOX{I1,J2}.p2	
mm9_v1_chr1_-_183074270_183074295	0.0790931	FOX{I1,J2}.p2	BC031847|Nvl|67459|nuclear VCP-like	AK013982|Nvl|67459|nuclear VCP-like	AK018049|Nvl|67459|nuclear VCP-like	NM_026171|Nvl|67459|nuclear VCP-like
mm9_v1_chr4_-_94269846_94269942	0.0788213	FOX{I1,J2}.p2	BC139773|Plaa|18786|phospholipase A2, activating protein	AK075934|Plaa|18786|phospholipase A2, activating protein	BC139355|Plaa|18786|phospholipase A2, activating protein	BC139356|Plaa|18786|phospholipase A2, activating protein	NM_172695|Plaa|18786|phospholipase A2, activating protein	AK019070|Plaa|18786|phospholipase A2, activating protein
mm9_v1_chr3_+_55586431_55586482	0.0787407	FOX{I1,J2}.p2	NM_010750|Mab21l1|17116|mab-21-like 1 (C. elegans)	AK043552|Mab21l1|17116|mab-21-like 1 (C. elegans)	AF040945|Mab21l1|17116|mab-21-like 1 (C. elegans)	AF228913|Mab21l1|17116|mab-21-like 1 (C. elegans)	AK032114|Mab21l1|17116|mab-21-like 1 (C. elegans)	BC014750|Mab21l1|17116|mab-21-like 1 (C. elegans)
mm9_v1_chr3_-_115956312_115956401	0.0783674	FOX{I1,J2}.p2	BC029939|Gpr88|64378|G-protein coupled receptor 88	AB042408|Gpr88|64378|G-protein coupled receptor 88	NM_022427|Gpr88|64378|G-protein coupled receptor 88
mm9_v1_chr17_+_17511515_17511560	0.0782159	FOX{I1,J2}.p2	AK090011|Riok2|67045|RIO kinase 2 (yeast)	AK008385|Riok2|67045|RIO kinase 2 (yeast)	AK008451|Riok2|67045|RIO kinase 2 (yeast)	AK049232|Riok2|67045|RIO kinase 2 (yeast)	BC010781|Riok2|67045|RIO kinase 2 (yeast)
mm9_v1_chr9_-_107775011_107775029	0.0780637	FOX{I1,J2}.p2	AK220446|Rbm6|19654|RNA binding motif protein 6	AJ006486|Rbm6|19654|RNA binding motif protein 6	BC026130|Rbm6|19654|RNA binding motif protein 6
mm9_v1_chr3_-_10208575_10208582	0.0776339	FOX{I1,J2}.p2	AK003143|Fabp4|11770|fatty acid binding protein 4, adipocyte	AK088535|Fabp4|11770|fatty acid binding protein 4, adipocyte	NM_024406|Fabp4|11770|fatty acid binding protein 4, adipocyte
mm9_v1_chr18_+_37915375_37915594	0.0774155	FOX{I1,J2}.p2	BC064675|Pcdhga11|93723|protocadherin gamma subfamily A, 11	NM_033594|Pcdhga11|93723|protocadherin gamma subfamily A, 11	BC059837|Pcdhga11|93723|protocadherin gamma subfamily A, 11	AY013794|Pcdhga11|93723|protocadherin gamma subfamily A, 11
mm9_v1_chr3_+_94203140_94203230	0.0773514	FOX{I1,J2}.p2	AK040952|Lingo4|320747|leucine rich repeat and Ig domain containing 4	NM_177250|Lingo4|320747|leucine rich repeat and Ig domain containing 4	BC117866|Lingo4|320747|leucine rich repeat and Ig domain containing 4	BC117867|Lingo4|320747|leucine rich repeat and Ig domain containing 4
mm9_v1_chr5_-_114292548_114292630	0.0771576	FOX{I1,J2}.p2	
mm9_v1_chr16_+_23609986_23610176	0.0769334	FOX{I1,J2}.p2	NM_023386|Rtp4|67775|receptor transporter protein 4	AK018021|Rtp4|67775|receptor transporter protein 4	AJ251364|Rtp4|67775|receptor transporter protein 4	AK007477|Rtp4|67775|receptor transporter protein 4	BC024872|Rtp4|67775|receptor transporter protein 4	AY562228|Rtp4|67775|receptor transporter protein 4
mm9_v1_chr11_+_73416083_73416083	0.0766866	FOX{I1,J2}.p2	NM_207224|Olfr384|193053|olfactory receptor 384
mm9_v1_chr17_+_35404109_35404141	0.0765305	FOX{I1,J2}.p2	
mm9_v1_chr3_-_58934492_58934545	0.0764999	FOX{I1,J2}.p2	BC028995|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	AK164982|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	AK140301|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	AF177211|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	BC058558|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	NM_001008497|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14	NM_133200|P2ry14|140795|purinergic receptor P2Y, G-protein coupled, 14
mm9_v1_chr6_+_121195885_121196041	0.0764753	FOX{I1,J2}.p2	AK151011|Usp18|24110|ubiquitin specific peptidase 18	AK151260|Usp18|24110|ubiquitin specific peptidase 18	AK151722|Usp18|24110|ubiquitin specific peptidase 18	NM_011909|Usp18|24110|ubiquitin specific peptidase 18	AK149772|Usp18|24110|ubiquitin specific peptidase 18	AK004296|Usp18|24110|ubiquitin specific peptidase 18	AK153312|Usp18|24110|ubiquitin specific peptidase 18	AK152034|Usp18|24110|ubiquitin specific peptidase 18	AK152574|Usp18|24110|ubiquitin specific peptidase 18	AF069502|Usp18|24110|ubiquitin specific peptidase 18	BC138562|Usp18|24110|ubiquitin specific peptidase 18	BC138577|Usp18|24110|ubiquitin specific peptidase 18
mm9_v1_chr16_-_38713106_38713149	0.0763427	FOX{I1,J2}.p2	NM_020260|Arhgap31|12549|Rho GTPase activating protein 31
mm9_v1_chr4_-_109125244_109125254	0.0762502	FOX{I1,J2}.p2	AK139182|Rnf11|29864|ring finger protein 11
mm9_v1_chr3_+_94497485_94497530	0.0760495	FOX{I1,J2}.p2	NM_019414|Selenbp2|20342|selenium binding protein 2	S56599|Selenbp2|20342|selenium binding protein 2	BC024106|Selenbp2|20342|selenium binding protein 2
mm9_v1_chr5_-_110698874_110698881	0.0759369	FOX{I1,J2}.p2	AK049246|Pgam5|72542|phosphoglycerate mutase family member 5	AK169643|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chr14_+_48092305_48092319	0.0759068	FOX{I1,J2}.p2	AK171630|Fbxo34|78938|F-box protein 34
mm9_v1_chrX_-_98417753_98417901	0.0756834	FOX{I1,J2}.p2	AK168604|Snx12|55988|sorting nexin 12	AK011257|Snx12|55988|sorting nexin 12	AK170403|Snx12|55988|sorting nexin 12	AK049561|Snx12|55988|sorting nexin 12	AK146833|Snx12|55988|sorting nexin 12	AF062484|Snx12|55988|sorting nexin 12	BC002009|Snx12|55988|sorting nexin 12	AK148235|Snx12|55988|sorting nexin 12	AK169569|Snx12|55988|sorting nexin 12	AK170992|Snx12|55988|sorting nexin 12	AK131838|Snx12|55988|sorting nexin 12	NM_001110310|Snx12|55988|sorting nexin 12	NM_001110311|Snx12|55988|sorting nexin 12	NM_018875|Snx12|55988|sorting nexin 12
mm9_v1_chr8_-_113365126_113365129	0.0753489	FOX{I1,J2}.p2	AK214493|Sf3b3|101943|splicing factor 3b, subunit 3	AK209569|Sf3b3|101943|splicing factor 3b, subunit 3
mm9_v1_chr7_+_138589597_138589692	0.0750109	FOX{I1,J2}.p2	AK078636|Acadsb|66885|acyl-Coenzyme A dehydrogenase, short/branched chain
mm9_v1_chr16_+_13265171_13265171	0.0749687	FOX{I1,J2}.p2	BC028459|Mkl2|239719|MKL/myocardin-like 2	NM_181860|Mkl2|239719|MKL/myocardin-like 2
mm9_v1_chr18_+_37644674_37644812	0.0748724	FOX{I1,J2}.p2	BC017149|Pcdhb17|93888|protocadherin beta 17	NM_053142|Pcdhb17|93888|protocadherin beta 17	AK077255|Pcdhb17|93888|protocadherin beta 17	AF326310|Pcdhb17|93888|protocadherin beta 17	AY013778|Pcdhb17|93888|protocadherin beta 17
mm9_v1_chr12_-_105711324_105711536	0.0748409	FOX{I1,J2}.p2	AB221548|Gsc|14836|goosecoid homeobox	Y13150|Gsc|14836|goosecoid homeobox	NM_010351|Gsc|14836|goosecoid homeobox	Y13149|Gsc|14836|goosecoid homeobox	X99239|Gsc|14836|goosecoid homeobox
mm9_v1_chr18_-_39572137_39572180	0.0748092	FOX{I1,J2}.p2	AK171439|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1	AK163857|Nr3c1|14815|nuclear receptor subfamily 3, group C, member 1
mm9_v1_chr4_-_6202747_6202782	0.074694	FOX{I1,J2}.p2	BC130261|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050020|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050220|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050260|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	NM_007824|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1	AK050210|Cyp7a1|13122|cytochrome P450, family 7, subfamily a, polypeptide 1
mm9_v1_chr17_+_56767565_56767565	0.074365	FOX{I1,J2}.p2	AK014981|4921529N20Rik|70944|RIKEN cDNA 4921529N20 gene	NM_175350|Tmem146|106757|transmembrane protein 146
mm9_v1_chr8_+_47619706_47619715	0.0740079	FOX{I1,J2}.p2	
mm9_v1_chr7_-_28764157_28764207	0.0740077	FOX{I1,J2}.p2	BC062253|Zfp780b|338354|zinc finger protein 780B	BC094325|Zfp780b|338354|zinc finger protein 780B	AK045524|Zfp780b|338354|zinc finger protein 780B	NM_001081021|Zfp780b|338354|zinc finger protein 780B	AK083956|Zfp780b|338354|zinc finger protein 780B
mm9_v1_chr2_+_43410844_43410873	0.0739606	FOX{I1,J2}.p2	AK014484|Kynu|70789|kynureninase (L-kynurenine hydrolase)	AK050024|Kynu|70789|kynureninase (L-kynurenine hydrolase)	NM_027552|Kynu|70789|kynureninase (L-kynurenine hydrolase)	BC069848|Kynu|70789|kynureninase (L-kynurenine hydrolase)	AK040584|Kynu|70789|kynureninase (L-kynurenine hydrolase)	BC026950|Kynu|70789|kynureninase (L-kynurenine hydrolase)
mm9_v1_chr7_-_116760069_116760081	0.0738346	FOX{I1,J2}.p2	BC051034|St5|76954|suppression of tumorigenicity 5
mm9_v1_chr17_+_45570766_45570813	0.0737443	FOX{I1,J2}.p2	AK045689|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK046225|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK083460|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK171144|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK162357|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene	AK140548|B230354K17Rik|320063|RIKEN cDNA B230354K17 gene
mm9_v1_chr10_-_43260744_43260803	0.0737019	FOX{I1,J2}.p2	AK008795|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	AK163304|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	BC013506|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	AK006199|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	NM_026411|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene	AK007370|1700021F05Rik|67851|RIKEN cDNA 1700021F05 gene
mm9_v1_chr2_-_32630849_32630902	0.0734303	FOX{I1,J2}.p2	BC140991|Ttc16|338348|tetratricopeptide repeat domain 16	BC145064|Ttc16|338348|tetratricopeptide repeat domain 16	AK028040|Ttc16|338348|tetratricopeptide repeat domain 16	AK160435|Ttc16|338348|tetratricopeptide repeat domain 16	NM_177384|Ttc16|338348|tetratricopeptide repeat domain 16
mm9_v1_chr10_-_42722514_42722517	0.0729153	FOX{I1,J2}.p2	AK019306|Sobp|109205|sine oculis-binding protein homolog (Drosophila)
mm9_v1_chr4_-_44079664_44079905	0.0726255	FOX{I1,J2}.p2	AK199019|Gne|50798|glucosamine	AJ132236|Gne|50798|glucosamine
mm9_v1_chr6_+_56935288_56935335	0.0725686	FOX{I1,J2}.p2	BC138068|Vmn1r5|171192|vomeronasal 1 receptor 5	BC138069|Vmn1r5|171192|vomeronasal 1 receptor 5	NM_134174|Vmn1r5|171192|vomeronasal 1 receptor 5
mm9_v1_chr7_+_30693538_30693575	0.0724234	FOX{I1,J2}.p2	AK155472|Zfp383|73729|zinc finger protein 383
mm9_v1_chr3_-_144347983_144348061	0.0723813	FOX{I1,J2}.p2	
mm9_v1_chr11_-_77990151_77990167	0.072377	FOX{I1,J2}.p2	NM_080849|Nek8|140859|NIMA (never in mitosis gene a)-related expressed kinase 8
mm9_v1_chr17_-_33897428_33897430	0.0722739	FOX{I1,J2}.p2	NM_008997|Rab11b|19326|RAB11B, member RAS oncogene family
mm9_v1_chr5_-_124022937_124023057	0.0722126	FOX{I1,J2}.p2	AK194964|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AF439858|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK019463|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK140553|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK150282|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK150550|Vps33a|77573|vacuolar protein sorting 33A (yeast)	BC046417|Vps33a|77573|vacuolar protein sorting 33A (yeast)	AK041982|Vps33a|77573|vacuolar protein sorting 33A (yeast)	NM_029929|Vps33a|77573|vacuolar protein sorting 33A (yeast)
mm9_v1_chr11_+_100406921_100407015	0.0719555	FOX{I1,J2}.p2	BC050805|Ttc25|74407|tetratricopeptide repeat domain 25	NM_028918|Ttc25|74407|tetratricopeptide repeat domain 25	AK161541|Ttc25|74407|tetratricopeptide repeat domain 25	AK162855|Ttc25|74407|tetratricopeptide repeat domain 25	AK016657|Ttc25|74407|tetratricopeptide repeat domain 25
mm9_v1_chr14_-_109313447_109313461	0.071802	FOX{I1,J2}.p2	NM_199065|Slitrk1|76965|SLIT and NTRK-like family, member 1
mm9_v1_chr16_-_97391923_97391986	0.0717034	FOX{I1,J2}.p2	AF315558|Dscam|13508|Down syndrome cell adhesion molecule
mm9_v1_chr1_-_141456740_141456821	0.0716786	FOX{I1,J2}.p2	BC111870|Cfhr1|50702|complement factor H-related 1	M29008|Cfhr1|50702|complement factor H-related 1	NM_015780|Cfhr1|50702|complement factor H-related 1
mm9_v1_chr2_-_25483461_25483497	0.0714427	FOX{I1,J2}.p2	AK159651|Fcna|14133|ficolin A	AK133539|Fcna|14133|ficolin A	NM_007995|Fcna|14133|ficolin A
mm9_v1_chr14_-_14953416_14953474	0.0711454	FOX{I1,J2}.p2	BC006869|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	NM_025550|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK002343|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AK010287|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6	AJ252147|Psmd6|66413|proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
mm9_v1_chr14_+_55506625_55506792	0.0710084	FOX{I1,J2}.p2	AK020321|Bcl2l2|12050|BCL2-like 2	AK020923|Bcl2l2|12050|BCL2-like 2
mm9_v1_chr11_+_117643610_117643698	0.0709678	FOX{I1,J2}.p2	NM_001195089|Tmc8|217356|transmembrane channel-like gene family 8	NM_001195090|Tmc8|217356|transmembrane channel-like gene family 8	NM_181856|Tmc8|217356|transmembrane channel-like gene family 8	AK171772|Tmc8|217356|transmembrane channel-like gene family 8	AK156764|Tmc8|217356|transmembrane channel-like gene family 8	AY236501|Tmc8|217356|transmembrane channel-like gene family 8
mm9_v1_chr3_-_36589048_36589088	0.0706703	FOX{I1,J2}.p2	AK082063|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3	AK080619|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3	AK032317|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3	NM_019510|Trpc3|22065|transient receptor potential cation channel, subfamily C, member 3
mm9_v1_chr6_-_83456775_83456962	0.0699892	FOX{I1,J2}.p2	AK167071|Dguok|27369|deoxyguanosine kinase	U90524|Dguok|27369|deoxyguanosine kinase	AJ133749|Dguok|27369|deoxyguanosine kinase	AY037862|Dguok|27369|deoxyguanosine kinase	BC012647|Dguok|27369|deoxyguanosine kinase	AK035281|Dguok|27369|deoxyguanosine kinase	BC094920|Dguok|27369|deoxyguanosine kinase	NM_001162521|Dguok|27369|deoxyguanosine kinase	NM_013764|Dguok|27369|deoxyguanosine kinase
mm9_v1_chr13_-_91044959_91044959	0.0692537	FOX{I1,J2}.p2	NM_001145879|Atp6ap1l|435376|ATPase, H+ transporting, lysosomal accessory protein 1-like
mm9_v1_chr18_-_34784206_34784257	0.0691264	FOX{I1,J2}.p2	BC021482|Brd8|78656|bromodomain containing 8	AK132365|Brd8|78656|bromodomain containing 8	AK014475|Brd8|78656|bromodomain containing 8	BC023837|Brd8|78656|bromodomain containing 8	AK019151|Brd8|78656|bromodomain containing 8	AK032320|Brd8|78656|bromodomain containing 8	AK161689|Brd8|78656|bromodomain containing 8	AK042446|Brd8|78656|bromodomain containing 8	AK172658|Brd8|78656|bromodomain containing 8
mm9_v1_chr18_+_63868373_63868480	0.0690933	FOX{I1,J2}.p2	BC026618|Wdr7|104082|WD repeat domain 7	BC125573|Wdr7|104082|WD repeat domain 7	BC137785|Wdr7|104082|WD repeat domain 7
mm9_v1_chr10_-_43621518_43621567	0.0690652	FOX{I1,J2}.p2	BC070459|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	AK012351|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	NM_001081054|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	AK041347|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1	AK038801|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
mm9_v1_chr3_+_30501527_30501587	0.0690325	FOX{I1,J2}.p2	AK013445|Mynn|80732|myoneurin	AK030898|Mynn|80732|myoneurin	AK147959|Mynn|80732|myoneurin	AK136107|Mynn|80732|myoneurin	AK014315|Mynn|80732|myoneurin	AK019238|Mynn|80732|myoneurin	AK163261|Mynn|80732|myoneurin	AK163264|Mynn|80732|myoneurin	BC007477|Mynn|80732|myoneurin	AK029657|Mynn|80732|myoneurin
mm9_v1_chr1_+_169548381_169548439	0.0690306	FOX{I1,J2}.p2	NM_001159731|Rxrg|20183|retinoid X receptor gamma	S62952|Rxrg|20183|retinoid X receptor gamma
mm9_v1_chr8_-_46467524_46467644	0.0686911	FOX{I1,J2}.p2	BC035537|Fam149a|212326|family with sequence similarity 149, member A	AK141607|Fam149a|212326|family with sequence similarity 149, member A	AK140440|Fam149a|212326|family with sequence similarity 149, member A	NM_153535|Fam149a|212326|family with sequence similarity 149, member A
mm9_v1_chr16_+_4940800_4940851	0.0686073	FOX{I1,J2}.p2	
mm9_v1_chr1_-_134264461_134264465	0.0685944	FOX{I1,J2}.p2	AK145948|Tmcc2|68875|transmembrane and coiled-coil domains 2	AK172313|Tmcc2|68875|transmembrane and coiled-coil domains 2	AK172382|Tmcc2|68875|transmembrane and coiled-coil domains 2	AK158436|Tmcc2|68875|transmembrane and coiled-coil domains 2	AK165309|Tmcc2|68875|transmembrane and coiled-coil domains 2	AK171635|Tmcc2|68875|transmembrane and coiled-coil domains 2	AK172356|Tmcc2|68875|transmembrane and coiled-coil domains 2	AK172541|Tmcc2|68875|transmembrane and coiled-coil domains 2	AK172720|Tmcc2|68875|transmembrane and coiled-coil domains 2
mm9_v1_chr11_+_106612525_106612642	0.0685282	FOX{I1,J2}.p2	BC139224|Gm885|380732|predicted gene 885	BC139225|Gm885|380732|predicted gene 885	BC145580|Gm885|380732|predicted gene 885	BC145582|Gm885|380732|predicted gene 885	AK169925|Gm885|380732|predicted gene 885	AB542953|Gm885|380732|predicted gene 885	AK136488|Gm885|380732|predicted gene 885	AK137500|Gm885|380732|predicted gene 885	AK171381|Gm885|380732|predicted gene 885	NM_001033435|Gm885|380732|predicted gene 885	AK151814|Gm885|380732|predicted gene 885	AK170947|Gm885|380732|predicted gene 885	AK153506|Gm885|380732|predicted gene 885
mm9_v1_chr13_+_104968863_104968906	0.0685149	FOX{I1,J2}.p2	AK039280|Trim23|81003|tripartite motif-containing 23
mm9_v1_chr17_+_87424886_87424972	0.0683974	FOX{I1,J2}.p2	NM_019936|Cript|56724|cysteine-rich PDZ-binding protein	AK004828|Cript|56724|cysteine-rich PDZ-binding protein	AK029409|Cript|56724|cysteine-rich PDZ-binding protein	AK008523|Cript|56724|cysteine-rich PDZ-binding protein	BC023013|Cript|56724|cysteine-rich PDZ-binding protein	AF151637|Cript|56724|cysteine-rich PDZ-binding protein
mm9_v1_chr13_-_64468380_64468393	0.0683717	FOX{I1,J2}.p2	Y18465|Ctsl|13039|cathepsin L
mm9_v1_chr7_-_112292815_112292822	0.0681866	FOX{I1,J2}.p2	BC111830|Olfr683|259047|olfactory receptor 683	BC148203|Olfr683|259047|olfactory receptor 683	NM_147045|Olfr683|259047|olfactory receptor 683
mm9_v1_chr12_-_76815494_76815519	0.0681358	FOX{I1,J2}.p2	
mm9_v1_chr15_-_66761030_66761081	0.0679971	FOX{I1,J2}.p2	
mm9_v1_chr2_+_109532592_109532697	0.0678647	FOX{I1,J2}.p2	AY057913|Bdnf|12064|brain derived neurotrophic factor	EF125673|Bdnf|12064|brain derived neurotrophic factor	NM_001048141|Bdnf|12064|brain derived neurotrophic factor
mm9_v1_chr12_+_17285392_17285402	0.0678118	FOX{I1,J2}.p2	AK211058|Pdia6|71853|protein disulfide isomerase associated 6	AK217964|Pdia6|71853|protein disulfide isomerase associated 6
mm9_v1_chr6_+_29298117_29298193	0.0678111	FOX{I1,J2}.p2	AK163674|Calu|12321|calumenin	NM_007594|Calu|12321|calumenin	NM_184053|Calu|12321|calumenin	AK035600|Calu|12321|calumenin	BC051423|Calu|12321|calumenin	AK032402|Calu|12321|calumenin	AK147756|Calu|12321|calumenin	AK160795|Calu|12321|calumenin	AK161807|Calu|12321|calumenin	AK166705|Calu|12321|calumenin	AK148178|Calu|12321|calumenin	AY225334|Calu|12321|calumenin	U81829|Calu|12321|calumenin	AK135295|Calu|12321|calumenin
mm9_v1_chr13_+_14722520_14722529	0.0676382	FOX{I1,J2}.p2	AK167401|AW209491|105351|expressed sequence AW209491	NM_134067|AW209491|105351|expressed sequence AW209491
mm9_v1_chr3_-_84283349_84283412	0.0675673	FOX{I1,J2}.p2	BC137632|Fhdc1|229474|FH2 domain containing 1	AK173244|Fhdc1|229474|FH2 domain containing 1
mm9_v1_chr9_-_42062436_42062522	0.067494	FOX{I1,J2}.p2	AK050439|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)	AK165139|Sc5d|235293|sterol-C5-desaturase (fungal ERG3, delta-5-desaturase) homolog (S. cerevisae)
mm9_v1_chr12_-_56403648_56403785	0.0673784	FOX{I1,J2}.p2	AK017550|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK013403|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	BC138295|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	BC138296|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AJ238247|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK087572|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK015746|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK040589|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK088240|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK028254|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma
mm9_v1_chr14_+_61351770_61351875	0.0673139	FOX{I1,J2}.p2	AK151394|Spata13|219140|spermatogenesis associated 13
mm9_v1_chr1_+_65357830_65357830	0.0673083	FOX{I1,J2}.p2	AK045576|Pth2r|213527|parathyroid hormone 2 receptor	NM_139270|Pth2r|213527|parathyroid hormone 2 receptor
mm9_v1_chr9_-_64101429_64101455	0.0672743	FOX{I1,J2}.p2	AK154793|Map2k1|26395|mitogen-activated protein kinase kinase 1
mm9_v1_chr3_-_108365049_108365097	0.0672231	FOX{I1,J2}.p2	AK155399|Tmem167b|67495|transmembrane protein 167B
mm9_v1_chr15_-_36426538_36426542	0.0670897	FOX{I1,J2}.p2	AB076382|Ankrd46|68839|ankyrin repeat domain 46
mm9_v1_chr17_+_80706746_80706746	0.0670626	FOX{I1,J2}.p2	NM_001145452|Arhgef33|381112|Rho guanine nucleotide exchange factor (GEF) 33
mm9_v1_chr6_+_146591082_146591141	0.0669232	FOX{I1,J2}.p2	AK009742|Med21|108098|mediator complex subunit 21	AK012217|Med21|108098|mediator complex subunit 21	NM_025315|Med21|108098|mediator complex subunit 21	AK014428|Med21|108098|mediator complex subunit 21	AK019417|Med21|108098|mediator complex subunit 21	BC012286|Med21|108098|mediator complex subunit 21
mm9_v1_chr10_+_42550365_42550378	0.0667619	FOX{I1,J2}.p2	AK017703|Sec63|140740|SEC63-like (S. cerevisiae)
mm9_v1_chr11_+_115626816_115626845	0.0667183	FOX{I1,J2}.p2	BC053088|2310067B10Rik|71947|RIKEN cDNA 2310067B10 gene
mm9_v1_chr18_+_74442753_74442835	0.0666515	FOX{I1,J2}.p2	NM_028948|Ccdc11|74453|coiled-coil domain containing 11	AK016821|Ccdc11|74453|coiled-coil domain containing 11	AK162352|Ccdc11|74453|coiled-coil domain containing 11	BC099500|Ccdc11|74453|coiled-coil domain containing 11
mm9_v1_chr9_+_82723787_82723813	0.0666106	FOX{I1,J2}.p2	AJ242722|Irak1bp1|65099|interleukin-1 receptor-associated kinase 1 binding protein 1
mm9_v1_chr5_+_130845319_130845359	0.0662486	FOX{I1,J2}.p2	NM_181045|Caln1|140904|calneuron 1	AF282251|Caln1|140904|calneuron 1	AK035865|Caln1|140904|calneuron 1
mm9_v1_chr7_-_28338127_28338176	0.0658859	FOX{I1,J2}.p2	BC068170|Pld3|18807|phospholipase D family, member 3	AF026124|Pld3|18807|phospholipase D family, member 3	NM_011116|Pld3|18807|phospholipase D family, member 3
mm9_v1_chr11_+_57332162_57332229	0.0658824	FOX{I1,J2}.p2	AK076071|Mfap3|216760|microfibrillar-associated protein 3	NM_145426|Mfap3|216760|microfibrillar-associated protein 3	NM_180599|Mfap3|216760|microfibrillar-associated protein 3	AK042988|Mfap3|216760|microfibrillar-associated protein 3	AK080405|Mfap3|216760|microfibrillar-associated protein 3	AK155122|Mfap3|216760|microfibrillar-associated protein 3	BC006828|Mfap3|216760|microfibrillar-associated protein 3
mm9_v1_chr2_+_180701966_180702005	0.0651771	FOX{I1,J2}.p2	BC027794|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC016228|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK030295|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AJ401461|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC052922|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK089321|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK052985|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK134402|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	BC059817|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	AK030520|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1	NM_001177706|Arfgap1|228998|ADP-ribosylation factor GTPase activating protein 1
mm9_v1_chr1_-_89905074_89905142	0.0651508	FOX{I1,J2}.p2	BC030843|Usp40|227334|ubiquitin specific peptidase 40	AK166303|Usp40|227334|ubiquitin specific peptidase 40	BC117957|Usp40|227334|ubiquitin specific peptidase 40	BC117958|Usp40|227334|ubiquitin specific peptidase 40	AK050239|Usp40|227334|ubiquitin specific peptidase 40	AK045613|Usp40|227334|ubiquitin specific peptidase 40	AK132295|Usp40|227334|ubiquitin specific peptidase 40	NM_001033291|Usp40|227334|ubiquitin specific peptidase 40	NM_001198573|Usp40|227334|ubiquitin specific peptidase 40
mm9_v1_chr3_+_82859422_82859482	0.0650311	FOX{I1,J2}.p2	AK080068|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK077197|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	NM_016784|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK075993|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)	AK076007|Plrg1|53317|pleiotropic regulator 1, PRL1 homolog (Arabidopsis)
mm9_v1_chr15_+_91958558_91958558	0.0650289	FOX{I1,J2}.p2	NM_007727|Cntn1|12805|contactin 1
mm9_v1_chr16_+_20535519_20535657	0.0649247	FOX{I1,J2}.p2	AK146517|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK168414|Ap2m1|11773|adaptor protein complex AP-2, mu1	NM_009679|Ap2m1|11773|adaptor protein complex AP-2, mu1	U27106|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK159534|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC056352|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK150358|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC089342|Ap2m1|11773|adaptor protein complex AP-2, mu1	BC094510|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK143586|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK141862|Ap2m1|11773|adaptor protein complex AP-2, mu1	AK172889|Ap2m1|11773|adaptor protein complex AP-2, mu1
mm9_v1_chr1_-_173537404_173537546	0.0649138	FOX{I1,J2}.p2	M84412|Ly9|17085|lymphocyte antigen 9	BC055380|Ly9|17085|lymphocyte antigen 9	BC066212|Ly9|17085|lymphocyte antigen 9	AB196804|Ly9|17085|lymphocyte antigen 9	AB196805|Ly9|17085|lymphocyte antigen 9	AB196806|Ly9|17085|lymphocyte antigen 9	AB196807|Ly9|17085|lymphocyte antigen 9	AK087345|Ly9|17085|lymphocyte antigen 9	BC095921|Ly9|17085|lymphocyte antigen 9	AK134106|Ly9|17085|lymphocyte antigen 9	AK150121|Ly9|17085|lymphocyte antigen 9	AK042288|Ly9|17085|lymphocyte antigen 9	AK088815|Ly9|17085|lymphocyte antigen 9	AK040306|Ly9|17085|lymphocyte antigen 9	NM_008534|Ly9|17085|lymphocyte antigen 9	AF244130|Ly9|17085|lymphocyte antigen 9	AF244131|Ly9|17085|lymphocyte antigen 9
mm9_v1_chr5_-_42235518_42235530	0.0645359	FOX{I1,J2}.p2	AK046296|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK053690|Bod1l|665775|biorientation of chromosomes in cell division 1-like	AK134590|Bod1l|665775|biorientation of chromosomes in cell division 1-like
mm9_v1_chr3_-_130412360_130412367	0.0645238	FOX{I1,J2}.p2	NM_025509|Ostc|66357|oligosaccharyltransferase complex subunit
mm9_v1_chr8_-_89409079_89409204	0.064523	FOX{I1,J2}.p2	AK134934|N4bp1|80750|NEDD4 binding protein 1	AK172981|N4bp1|80750|NEDD4 binding protein 1	AK147522|N4bp1|80750|NEDD4 binding protein 1	NM_030563|N4bp1|80750|NEDD4 binding protein 1
mm9_v1_chr8_+_77517536_77517607	0.0644243	FOX{I1,J2}.p2	AK156670|Hmgxb4|70823|HMG box domain containing 4	AK014640|Hmgxb4|70823|HMG box domain containing 4	BC048188|Hmgxb4|70823|HMG box domain containing 4	BC049800|Hmgxb4|70823|HMG box domain containing 4	NM_178017|Hmgxb4|70823|HMG box domain containing 4	BC023721|Hmgxb4|70823|HMG box domain containing 4
mm9_v1_chr19_+_31943250_31943302	0.0641319	FOX{I1,J2}.p2	NM_001081074|A1cf|69865|APOBEC1 complementation factor	AY566862|A1cf|69865|APOBEC1 complementation factor	AY566863|A1cf|69865|APOBEC1 complementation factor	AY566864|A1cf|69865|APOBEC1 complementation factor	AK007970|A1cf|69865|APOBEC1 complementation factor	BC089622|A1cf|69865|APOBEC1 complementation factor
mm9_v1_chr13_-_29043539_29043562	0.0636427	FOX{I1,J2}.p2	AK031394|Sox4|20677|SRY-box containing gene 4	AK153771|Sox4|20677|SRY-box containing gene 4
mm9_v1_chr16_-_16358625_16358644	0.0636236	FOX{I1,J2}.p2	AK154123|Dnm1l|74006|dynamin 1-like	BC040777|Dnm1l|74006|dynamin 1-like
mm9_v1_chr1_-_45559866_45559893	0.0635757	FOX{I1,J2}.p2	BC055077|Col5a2|12832|collagen, type V, alpha 2
mm9_v1_chr3_+_67406958_67407063	0.063447	FOX{I1,J2}.p2	AK171855|Mfsd1|66868|major facilitator superfamily domain containing 1
mm9_v1_chr3_-_105762117_105762217	0.0628213	FOX{I1,J2}.p2	AK169634|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	BC089574|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK162311|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK149176|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK167626|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK168590|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK151574|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK081249|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK002960|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	BC049640|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK011312|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK168028|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK168041|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK019459|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK037892|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK152253|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK152829|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK167480|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK169137|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK150730|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK151250|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK158569|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1	AK157544|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
mm9_v1_chr2_-_168478155_168478229	0.0627413	FOX{I1,J2}.p2	AK203030|Atp9a|11981|ATPase, class II, type 9A
mm9_v1_chrX_+_149932693_149932774	0.062639	FOX{I1,J2}.p2	AK076159|Ubqln2|54609|ubiquilin 2	AF177346|Ubqln2|54609|ubiquilin 2	BC053022|Ubqln2|54609|ubiquilin 2	NM_018798|Ubqln2|54609|ubiquilin 2
mm9_v1_chr4_+_155383386_155383404	0.0624561	FOX{I1,J2}.p2	
mm9_v1_chr7_+_134439804_134439861	0.0624275	FOX{I1,J2}.p2	AK156251|Itgal|16408|integrin alpha L	AK172394|Itgal|16408|integrin alpha L	AK154115|Itgal|16408|integrin alpha L	AK169628|Itgal|16408|integrin alpha L	NM_008400|Itgal|16408|integrin alpha L
mm9_v1_chr1_-_184246785_184246786	0.0621545	FOX{I1,J2}.p2	AK028774|Fbxo28|67948|F-box protein 28
mm9_v1_chr3_+_94736993_94737043	0.0619033	FOX{I1,J2}.p2	BC011202|Selenbp1|20341|selenium binding protein 1	NM_009150|Selenbp1|20341|selenium binding protein 1
mm9_v1_chr19_-_28754566_28754608	0.0618608	FOX{I1,J2}.p2	AK054020|Glis3|226075|GLIS family zinc finger 3	DQ871027|Glis3|226075|GLIS family zinc finger 3	NM_175459|Glis3|226075|GLIS family zinc finger 3
mm9_v1_chr10_-_88875526_88875657	0.0618577	FOX{I1,J2}.p2	AK171905|Gas2l3|237436|growth arrest-specific 2 like 3	AK136819|Gas2l3|237436|growth arrest-specific 2 like 3
mm9_v1_chr4_+_95246111_95246193	0.0617951	FOX{I1,J2}.p2	NM_029347|Fggy|75578|FGGY carbohydrate kinase domain containing	AK085534|Fggy|75578|FGGY carbohydrate kinase domain containing	BC031708|Fggy|75578|FGGY carbohydrate kinase domain containing
mm9_v1_chrX_-_165092598_165092599	0.0616801	FOX{I1,J2}.p2	AK053927|Msl3|17692|male-specific lethal 3 homolog (Drosophila)
mm9_v1_chr11_-_4494790_4494809	0.0616463	FOX{I1,J2}.p2	BC032166|Mtmr3|74302|myotubularin related protein 3	AK141138|Mtmr3|74302|myotubularin related protein 3	BC081544|Mtmr3|74302|myotubularin related protein 3
mm9_v1_chr3_-_103545641_103545788	0.0614491	FOX{I1,J2}.p2	AK159746|Hipk1|15257|homeodomain interacting protein kinase 1	AK076611|Hipk1|15257|homeodomain interacting protein kinase 1
mm9_v1_chr17_+_47278689_47278726	0.0614465	FOX{I1,J2}.p2	AK170333|Trerf1|224829|transcriptional regulating factor 1
mm9_v1_chr8_+_125589407_125589408	0.0613427	FOX{I1,J2}.p2	AK145540|Spg7|234847|spastic paraplegia 7 homolog (human)	AK171647|Spg7|234847|spastic paraplegia 7 homolog (human)	NM_153176|Spg7|234847|spastic paraplegia 7 homolog (human)
mm9_v1_chr11_-_97857486_97857496	0.0612514	FOX{I1,J2}.p2	BC065791|Arl5c|217151|ADP-ribosylation factor-like 5C	NM_207231|Arl5c|217151|ADP-ribosylation factor-like 5C	AK171194|Arl5c|217151|ADP-ribosylation factor-like 5C
mm9_v1_chr8_+_86939262_86939275	0.0610682	FOX{I1,J2}.p2	AK147288|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	NM_007578|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AK147277|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AK147498|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit	AK147697|Cacna1a|12286|calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
mm9_v1_chr7_+_31093768_31093831	0.060688	FOX{I1,J2}.p2	NM_198027|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	AK082058|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	BC029805|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)	AK170861|Alkbh6|233065|alkB, alkylation repair homolog 6 (E. coli)
mm9_v1_chr11_-_106127908_106127956	0.0606669	FOX{I1,J2}.p2	AK216602|Smarcd2|83796|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
mm9_v1_chr11_+_20991293_20991320	0.060267	FOX{I1,J2}.p2	AK020915|Peli1|67245|pellino 1
mm9_v1_chr17_+_34341467_34341526	0.0597391	FOX{I1,J2}.p2	AK145234|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK151657|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK161091|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	BC051257|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK020022|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK079667|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK151376|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK151483|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK153287|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	BC005578|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
mm9_v1_chr5_-_110698902_110698941	0.0596745	FOX{I1,J2}.p2	AK146216|Pgam5|72542|phosphoglycerate mutase family member 5	NM_001163538|Pgam5|72542|phosphoglycerate mutase family member 5	NM_028273|Pgam5|72542|phosphoglycerate mutase family member 5
mm9_v1_chr11_+_110927475_110927548	0.0595402	FOX{I1,J2}.p2	AK044915|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2	NM_008425|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2	X73052|Kcnj2|16518|potassium inwardly-rectifying channel, subfamily J, member 2
mm9_v1_chr7_-_93924317_93924373	0.0594036	FOX{I1,J2}.p2	BC119604|Folh1|53320|folate hydrolase	BC119605|Folh1|53320|folate hydrolase	AK002920|Folh1|53320|folate hydrolase	AF026380|Folh1|53320|folate hydrolase	AK090289|Folh1|53320|folate hydrolase	NM_001159706|Folh1|53320|folate hydrolase	NM_016770|Folh1|53320|folate hydrolase
mm9_v1_chr5_-_143656864_143656886	0.0592108	FOX{I1,J2}.p2	AK049302|Fbxl18|231863|F-box and leucine-rich repeat protein 18
mm9_v1_chr7_-_28338185_28338214	0.0592049	FOX{I1,J2}.p2	BC076586|Pld3|18807|phospholipase D family, member 3
mm9_v1_chr13_+_32893953_32893987	0.0591198	FOX{I1,J2}.p2	AK082078|Wrnip1|78903|Werner helicase interacting protein 1
mm9_v1_chr13_+_55827167_55827225	0.0589866	FOX{I1,J2}.p2	AK209800|Txndc15|69672|thioredoxin domain containing 15	AK213704|Txndc15|69672|thioredoxin domain containing 15	AK206830|Txndc15|69672|thioredoxin domain containing 15
mm9_v1_chr8_-_42300504_42300520	0.0589818	FOX{I1,J2}.p2	AF478470|Fgl1|234199|fibrinogen-like protein 1	AK083397|Fgl1|234199|fibrinogen-like protein 1	NM_145594|Fgl1|234199|fibrinogen-like protein 1
mm9_v1_chrX_-_99839480_99839617	0.0584517	FOX{I1,J2}.p2	X74616|Phka1|18679|phosphorylase kinase alpha 1	AK137497|Phka1|18679|phosphorylase kinase alpha 1	AK036440|Phka1|18679|phosphorylase kinase alpha 1	AK030426|Phka1|18679|phosphorylase kinase alpha 1	NM_008832|Phka1|18679|phosphorylase kinase alpha 1	NM_173021|Phka1|18679|phosphorylase kinase alpha 1
mm9_v1_chr13_-_27530465_27530556	0.0578825	FOX{I1,J2}.p2	AF090140|Prl8a6|19112|prolactin family 8, subfamily a, member 6	NM_011167|Prl8a6|19112|prolactin family 8, subfamily a, member 6	BC099469|Prl8a6|19112|prolactin family 8, subfamily a, member 6	AK005435|Prl8a6|19112|prolactin family 8, subfamily a, member 6	AK005478|Prl8a6|19112|prolactin family 8, subfamily a, member 6
mm9_v1_chr3_+_97705125_97705203	0.0577515	FOX{I1,J2}.p2	AK010363|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	AK034973|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	AK017237|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	AK037918|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	AK088514|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	AK134215|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	NM_011342|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	AK089928|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	BC009024|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)	U91538|Sec22b|20333|SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
mm9_v1_chr2_+_88798624_88798624	0.0577068	FOX{I1,J2}.p2	NM_207140|Olfr1212|258241|olfactory receptor 1212
mm9_v1_chr14_+_58445584_58445682	0.0576689	FOX{I1,J2}.p2	AK212819|Mrp63|67840|mitochondrial ribosomal protein 63
mm9_v1_chr17_+_26852700_26852741	0.0575673	FOX{I1,J2}.p2	BC113191|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene	BC113192|A930001N09Rik|77128|RIKEN cDNA A930001N09 gene
mm9_v1_chr7_+_97177668_97177676	0.0572542	FOX{I1,J2}.p2	AK165252|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK157435|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene	AK046045|E230029C05Rik|319711|RIKEN cDNA E230029C05 gene
mm9_v1_chr7_-_53285651_53285671	0.057186	FOX{I1,J2}.p2	AB028737|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	BC040400|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	EF109740|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	EF109741|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6	NM_018795|Abcc6|27421|ATP-binding cassette, sub-family C (CFTR/MRP), member 6
mm9_v1_chr17_-_56098803_56098845	0.0569049	FOX{I1,J2}.p2	
mm9_v1_chr7_-_112892755_112892902	0.0568387	FOX{I1,J2}.p2	BC031418|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor	NM_020024|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK047115|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor	BC080311|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor	AK139383|Taf10|24075|TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor
mm9_v1_chr9_-_115152128_115152185	0.0565626	FOX{I1,J2}.p2	
mm9_v1_chr9_-_71011053_71011095	0.056495	FOX{I1,J2}.p2	BC024105|Aqp9|64008|aquaporin 9	AK050042|Aqp9|64008|aquaporin 9	NM_022026|Aqp9|64008|aquaporin 9
mm9_v1_chr11_+_73600441_73600441	0.0561027	FOX{I1,J2}.p2	NM_146347|Olfr390|258344|olfactory receptor 390
mm9_v1_chr12_-_106103214_106103237	0.056081	FOX{I1,J2}.p2	BC141280|Clmn|94040|calmin
mm9_v1_chr15_-_24957039_24957112	0.055809	FOX{I1,J2}.p2	AK033069|Gm2824|100040529|predicted gene 2824	AK083927|Gm2824|100040529|predicted gene 2824
mm9_v1_chr19_+_5026004_5026105	0.0554891	FOX{I1,J2}.p2	X86682|Slc29a2|13340|solute carrier family 29 (nucleoside transporters), member 2
mm9_v1_chr10_-_80630518_80630667	0.0554	FOX{I1,J2}.p2	AK145367|Pias4|59004|protein inhibitor of activated STAT 4	AF109174|Pias4|59004|protein inhibitor of activated STAT 4
mm9_v1_chr17_+_87682206_87682305	0.0550899	FOX{I1,J2}.p2	AK040578|Ttc7|225049|tetratricopeptide repeat domain 7	NM_028639|Ttc7|225049|tetratricopeptide repeat domain 7	AK050263|Ttc7|225049|tetratricopeptide repeat domain 7	AK090252|Ttc7|225049|tetratricopeptide repeat domain 7	AK153704|Ttc7|225049|tetratricopeptide repeat domain 7	AK080284|Ttc7|225049|tetratricopeptide repeat domain 7	AK040610|Ttc7|225049|tetratricopeptide repeat domain 7	AK004107|Ttc7|225049|tetratricopeptide repeat domain 7
mm9_v1_chr7_+_25689409_25689425	0.0550808	FOX{I1,J2}.p2	BC012488|Arhgef1|16801|Rho guanine nucleotide exchange factor (GEF) 1
mm9_v1_chr12_+_66137309_66137322	0.0549844	FOX{I1,J2}.p2	AK154170|Prpf39|328110|PRP39 pre-mRNA processing factor 39 homolog (yeast)	NM_177806|Prpf39|328110|PRP39 pre-mRNA processing factor 39 homolog (yeast)
mm9_v1_chr2_+_181375295_181375333	0.0548415	FOX{I1,J2}.p2	AK182198|Prpf6|68879|PRP6 pre-mRNA splicing factor 6 homolog (yeast)	AK210126|Prpf6|68879|PRP6 pre-mRNA splicing factor 6 homolog (yeast)
mm9_v1_chr5_-_122110456_122110520	0.0546861	FOX{I1,J2}.p2	BC027825|Acad10|71985|acyl-Coenzyme A dehydrogenase family, member 10	AK050332|Acad10|71985|acyl-Coenzyme A dehydrogenase family, member 10	AK148195|Acad10|71985|acyl-Coenzyme A dehydrogenase family, member 10	NM_028037|Acad10|71985|acyl-Coenzyme A dehydrogenase family, member 10
mm9_v1_chr7_+_52955153_52955456	0.0542223	FOX{I1,J2}.p2	AK140073|Car11|12348|carbonic anhydrase 11	AK013465|Car11|12348|carbonic anhydrase 11	AY075026|Car11|12348|carbonic anhydrase 11	NM_009800|Car11|12348|carbonic anhydrase 11	BC019393|Car11|12348|carbonic anhydrase 11
mm9_v1_chr15_+_95621222_95621461	0.054214	FOX{I1,J2}.p2	BC060732|Ano6|105722|anoctamin 6	NM_175344|Ano6|105722|anoctamin 6	AK159411|Ano6|105722|anoctamin 6	AK089300|Ano6|105722|anoctamin 6
mm9_v1_chr9_-_64188945_64189063	0.05406	FOX{I1,J2}.p2	AK035357|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK032451|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	BC056939|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK173310|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK150851|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK151780|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	AK153433|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like	NM_001001295|Dis3l|213550|DIS3 mitotic control homolog (S. cerevisiae)-like
mm9_v1_chr1_-_99873641_99873694	0.0539122	FOX{I1,J2}.p2	AK049423|Pam|18484|peptidylglycine alpha-amidating monooxygenase
mm9_v1_chr7_+_108812146_108812327	0.0538154	FOX{I1,J2}.p2	AK006072|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK138593|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK159314|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK154577|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK049768|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK028101|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK141383|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	U09874|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	BC048175|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	NM_009191|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK032421|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)	AK145641|Clpb|20480|ClpB caseinolytic peptidase B homolog (E. coli)
mm9_v1_chr4_+_135842056_135842075	0.0537127	FOX{I1,J2}.p2	AK136405|Zfp46|22704|zinc finger protein 46
mm9_v1_chr14_-_21552866_21552879	0.0536013	FOX{I1,J2}.p2	AK202625|Ndst2|17423|N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 2
mm9_v1_chr3_-_152331083_152331103	0.0535892	FOX{I1,J2}.p2	AK053807|Ak5|229949|adenylate kinase 5	NM_001081277|Ak5|229949|adenylate kinase 5
mm9_v1_chr8_+_73051625_73051647	0.0535205	FOX{I1,J2}.p2	AK170993|Fkbp8|14232|FK506 binding protein 8	NM_001111066|Fkbp8|14232|FK506 binding protein 8	NM_010223|Fkbp8|14232|FK506 binding protein 8	AK152198|Fkbp8|14232|FK506 binding protein 8
mm9_v1_chr2_-_60591836_60591898	0.0534564	FOX{I1,J2}.p2	AK159851|Rbms1|56878|RNA binding motif, single stranded interacting protein 1
mm9_v1_chr3_-_151856716_151856729	0.0533926	FOX{I1,J2}.p2	AK028049|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK008537|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK162194|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4	AK136240|Dnajb4|67035|DnaJ (Hsp40) homolog, subfamily B, member 4
mm9_v1_chr12_+_87027595_87027673	0.0533692	FOX{I1,J2}.p2	AK018587|Batf|53314|basic leucine zipper transcription factor, ATF-like	AF017021|Batf|53314|basic leucine zipper transcription factor, ATF-like	NM_016767|Batf|53314|basic leucine zipper transcription factor, ATF-like
mm9_v1_chr6_+_48504791_48504950	0.0533608	FOX{I1,J2}.p2	AK143222|Lrrc61|243371|leucine rich repeat containing 61	NM_001110160|Lrrc61|243371|leucine rich repeat containing 61	NM_177736|Lrrc61|243371|leucine rich repeat containing 61	AK171463|Lrrc61|243371|leucine rich repeat containing 61	AK170792|Lrrc61|243371|leucine rich repeat containing 61	AK136901|Lrrc61|243371|leucine rich repeat containing 61	BC027309|Lrrc61|243371|leucine rich repeat containing 61
mm9_v1_chr11_+_49058980_49059003	0.0532646	FOX{I1,J2}.p2	L07037|Mgat1|17308|mannoside acetylglucosaminyltransferase 1
mm9_v1_chr19_-_39537540_39537568	0.0532568	FOX{I1,J2}.p2	AF047725|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38	AK050051|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38	BC150721|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38	NM_010002|Cyp2c38|13097|cytochrome P450, family 2, subfamily c, polypeptide 38
mm9_v1_chr16_-_94509462_94509462	0.0530237	FOX{I1,J2}.p2	BC050090|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)	NM_139145|Hlcs|110948|holocarboxylase synthetase (biotin- [propriony-Coenzyme A-carboxylase (ATP-hydrolysing)] ligase)
mm9_v1_chr5_+_25005506_25005758	0.0526712	FOX{I1,J2}.p2	AK149324|4831440E17Rik|320965|RIKEN cDNA 4831440E17 gene	AK029244|4831440E17Rik|320965|RIKEN cDNA 4831440E17 gene
mm9_v1_chr12_-_102267159_102267268	0.0523333	FOX{I1,J2}.p2	AY339881|Ccdc88c|68339|coiled-coil domain containing 88C	NM_026681|Ccdc88c|68339|coiled-coil domain containing 88C	BC043115|Ccdc88c|68339|coiled-coil domain containing 88C	BC063255|Ccdc88c|68339|coiled-coil domain containing 88C
mm9_v1_chr17_+_21672490_21672637	0.0523001	FOX{I1,J2}.p2	AK032299|Zfp52|22710|zinc finger protein 52	NM_144515|Zfp52|22710|zinc finger protein 52	BC021527|Zfp52|22710|zinc finger protein 52
mm9_v1_chr19_+_13439119_13439119	0.0522511	FOX{I1,J2}.p2	NM_146691|Olfr1467|258686|olfactory receptor 1467
mm9_v1_chr2_+_29989278_29989390	0.0521095	FOX{I1,J2}.p2	AK158066|Tbc1d13|70296|TBC1 domain family, member 13	AK188413|Tbc1d13|70296|TBC1 domain family, member 13	BC025586|Tbc1d13|70296|TBC1 domain family, member 13	NM_146252|Tbc1d13|70296|TBC1 domain family, member 13
mm9_v1_chr4_-_40886191_40886208	0.052084	FOX{I1,J2}.p2	AK188292|Bag1|12017|BCL2-associated athanogene 1
mm9_v1_chr3_+_142283605_142283716	0.0516036	FOX{I1,J2}.p2	BC032882|Gbp2|14469|guanylate binding protein 2	AF077007|Gbp2|14469|guanylate binding protein 2	NM_010260|Gbp2|14469|guanylate binding protein 2	BC011336|Gbp2|14469|guanylate binding protein 2	AJ007970|Gbp2|14469|guanylate binding protein 2	BC049141|Gbp2|14469|guanylate binding protein 2	AF109168|Gbp2|14469|guanylate binding protein 2	AK150138|Gbp2|14469|guanylate binding protein 2
mm9_v1_chr8_+_74999216_74999345	0.0515362	FOX{I1,J2}.p2	
mm9_v1_chr9_+_60560734_60560795	0.0515333	FOX{I1,J2}.p2	BC090615|Larp6|67557|La ribonucleoprotein domain family, member 6
mm9_v1_chr2_+_136539143_136539198	0.0515095	FOX{I1,J2}.p2	NM_011428|Snap25|20614|synaptosomal-associated protein 25	AK078038|Snap25|20614|synaptosomal-associated protein 25
mm9_v1_chr19_+_8810274_8810348	0.0513424	FOX{I1,J2}.p2	AK145704|Wdr74|107071|WD repeat domain 74	AK077521|Wdr74|107071|WD repeat domain 74	BC019968|Wdr74|107071|WD repeat domain 74	NM_134139|Wdr74|107071|WD repeat domain 74
mm9_v1_chr8_-_55606109_55606134	0.0513199	FOX{I1,J2}.p2	AK051731|Spcs3|76687|signal peptidase complex subunit 3 homolog (S. cerevisiae)
mm9_v1_chr12_+_85441603_85441781	0.0513196	FOX{I1,J2}.p2	AY999300|Acot6|217700|acyl-CoA thioesterase 6	NM_172580|Acot6|217700|acyl-CoA thioesterase 6	BC139306|Acot6|217700|acyl-CoA thioesterase 6	BC139328|Acot6|217700|acyl-CoA thioesterase 6	AK163605|Acot6|217700|acyl-CoA thioesterase 6	AK014558|Acot6|217700|acyl-CoA thioesterase 6	AK047479|Acot6|217700|acyl-CoA thioesterase 6	AK135361|Acot6|217700|acyl-CoA thioesterase 6	BC002159|Acot6|217700|acyl-CoA thioesterase 6
mm9_v1_chr19_-_42358648_42358713	0.0513183	FOX{I1,J2}.p2	AK013349|Crtac1|72832|cartilage acidic protein 1
mm9_v1_chr2_-_65201979_65202090	0.0512761	FOX{I1,J2}.p2	AK041015|Slc38a11|320106|solute carrier family 38, member 11	AK139966|Slc38a11|320106|solute carrier family 38, member 11	NM_177074|Slc38a11|320106|solute carrier family 38, member 11	AK034126|Slc38a11|320106|solute carrier family 38, member 11	AK043610|Slc38a11|320106|solute carrier family 38, member 11
mm9_v1_chr5_-_52957466_52957483	0.0512605	FOX{I1,J2}.p2	AK122570|Lgi2|246316|leucine-rich repeat LGI family, member 2
mm9_v1_chr1_+_74408681_74408737	0.0510808	FOX{I1,J2}.p2	AK138157|Gm216|241112|predicted gene 216	NM_001033345|Gm216|241112|predicted gene 216
mm9_v1_chr4_+_151852250_151852286	0.0505153	FOX{I1,J2}.p2	AF537131|Nphp4|260305|nephronophthisis 4 (juvenile) homolog (human)	AK084539|Nphp4|260305|nephronophthisis 4 (juvenile) homolog (human)	NM_153424|Nphp4|260305|nephronophthisis 4 (juvenile) homolog (human)	AK016223|Nphp4|260305|nephronophthisis 4 (juvenile) homolog (human)
mm9_v1_chr12_+_99866348_99866525	0.0504358	FOX{I1,J2}.p2	AK036359|Spata7|104871|spermatogenesis associated 7	AK169473|Spata7|104871|spermatogenesis associated 7	AK045704|Spata7|104871|spermatogenesis associated 7	AK153698|Spata7|104871|spermatogenesis associated 7	BC046960|Spata7|104871|spermatogenesis associated 7	NM_178914|Spata7|104871|spermatogenesis associated 7	AK161308|Spata7|104871|spermatogenesis associated 7	AK077500|Spata7|104871|spermatogenesis associated 7	DQ196101|Spata7|104871|spermatogenesis associated 7
mm9_v1_chr6_+_124654080_124654110	0.0503505	FOX{I1,J2}.p2	AK194975|Lpcat3|14792|lysophosphatidylcholine acyltransferase 3
mm9_v1_chr10_+_19890580_19890589	0.0501377	FOX{I1,J2}.p2	AK138516|1700026H06Rik|70376|RIKEN cDNA 1700026H06 gene	AK138667|1700026H06Rik|70376|RIKEN cDNA 1700026H06 gene
mm9_v1_chr17_+_36974055_36974078	0.0501339	FOX{I1,J2}.p2	AK142476|Trim26|22670|tripartite motif-containing 26
mm9_v1_chr9_-_64062342_64062398	0.0498999	FOX{I1,J2}.p2	AK165664|Map2k1|26395|mitogen-activated protein kinase kinase 1
mm9_v1_chr2_-_66622823_66622970	0.0497589	FOX{I1,J2}.p2	BC145273|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha	NM_009135|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha	AK142964|Scn7a|20272|sodium channel, voltage-gated, type VII, alpha
mm9_v1_chr7_-_77505248_77505478	0.0494766	FOX{I1,J2}.p2	X76653|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	U07635|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	AK140125|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	BC042484|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2	NM_009697|Nr2f2|11819|nuclear receptor subfamily 2, group F, member 2
mm9_v1_chr1_+_63492447_63492511	0.0493832	FOX{I1,J2}.p2	AK046677|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_001177600|Adam23|23792|a disintegrin and metallopeptidase domain 23	NM_011780|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK034022|Adam23|23792|a disintegrin and metallopeptidase domain 23	AK083458|Adam23|23792|a disintegrin and metallopeptidase domain 23
mm9_v1_chr6_+_142246944_142246973	0.0492118	FOX{I1,J2}.p2	NM_010491|Iapp|15874|islet amyloid polypeptide	BC027527|Iapp|15874|islet amyloid polypeptide
mm9_v1_chr2_-_155984800_155984951	0.0487435	FOX{I1,J2}.p2	AK134091|Rbm39|170791|RNA binding motif protein 39
mm9_v1_chr10_+_92951804_92951841	0.0484206	FOX{I1,J2}.p2	AK028963|Hal|15109|histidine ammonia lyase	AK081409|Hal|15109|histidine ammonia lyase	BC057637|Hal|15109|histidine ammonia lyase	L07645|Hal|15109|histidine ammonia lyase
mm9_v1_chr2_+_124435841_124435850	0.0483838	FOX{I1,J2}.p2	AK052232|Sema6d|214968|sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D
mm9_v1_chr4_+_24825226_24825304	0.048348	FOX{I1,J2}.p2	NM_026742|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK160341|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK034728|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK019042|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	BC028764|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4	AK003553|Ndufaf4|68493|NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, assembly factor 4
mm9_v1_chr13_+_73674194_73674271	0.0481243	FOX{I1,J2}.p2	BC054119|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	NM_010020|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AK032629|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AK136885|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	U16265|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3	AF109072|Slc6a3|13162|solute carrier family 6 (neurotransmitter transporter, dopamine), member 3
mm9_v1_chr11_+_68781623_68781690	0.0480404	FOX{I1,J2}.p2	AK171131|Slc25a35|71998|solute carrier family 25, member 35	AK007453|Slc25a35|71998|solute carrier family 25, member 35	NM_028048|Slc25a35|71998|solute carrier family 25, member 35	AK157873|Slc25a35|71998|solute carrier family 25, member 35	AK035739|Slc25a35|71998|solute carrier family 25, member 35	BC019996|Slc25a35|71998|solute carrier family 25, member 35
mm9_v1_chr12_-_79944026_79944112	0.0480197	FOX{I1,J2}.p2	
mm9_v1_chr17_+_24544500_24544654	0.0479989	FOX{I1,J2}.p2	BC049911|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3	BC056614|Abca3|27410|ATP-binding cassette, sub-family A (ABC1), member 3
mm9_v1_chr4_+_98697606_98697678	0.0479918	FOX{I1,J2}.p2	AK149450|Angptl3|30924|angiopoietin-like 3	NM_013913|Angptl3|30924|angiopoietin-like 3	AK149555|Angptl3|30924|angiopoietin-like 3	BC019491|Angptl3|30924|angiopoietin-like 3	AF162224|Angptl3|30924|angiopoietin-like 3
mm9_v1_chr11_-_17847399_17847495	0.0475527	FOX{I1,J2}.p2	AK018594|Etaa1|68145|Ewing's tumor-associated antigen 1
mm9_v1_chr9_-_49311823_49311910	0.0475489	FOX{I1,J2}.p2	X07233|Ncam1|17967|neural cell adhesion molecule 1
mm9_v1_chr2_+_164323044_164323060	0.0474897	FOX{I1,J2}.p2	AK162573|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	BC016520|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T	BC034175|Pigt|78928|phosphatidylinositol glycan anchor biosynthesis, class T
mm9_v1_chr1_+_174012909_174013066	0.0474867	FOX{I1,J2}.p2	AK171625|Copa|12847|coatomer protein complex subunit alpha	AK043479|Copa|12847|coatomer protein complex subunit alpha	AK164910|Copa|12847|coatomer protein complex subunit alpha	BC047429|Copa|12847|coatomer protein complex subunit alpha	BC024070|Copa|12847|coatomer protein complex subunit alpha	AF248032|Copa|12847|coatomer protein complex subunit alpha
mm9_v1_chr6_+_128388774_128388818	0.0474258	FOX{I1,J2}.p2	AK086937|Gm10069|791299|predicted gene 10069	AK046088|Gm10069|791299|predicted gene 10069
mm9_v1_chr13_+_3477477_3477548	0.047417	FOX{I1,J2}.p2	AK084238|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK013191|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK034854|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK087718|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK043092|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK031301|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene	AK043278|2810429I04Rik|76937|RIKEN cDNA 2810429I04 gene
mm9_v1_chr16_+_93884137_93884227	0.0474139	FOX{I1,J2}.p2	AK011243|Chaf1b|110749|chromatin assembly factor 1, subunit B (p60)	NM_028083|Chaf1b|110749|chromatin assembly factor 1, subunit B (p60)	AK038378|Chaf1b|110749|chromatin assembly factor 1, subunit B (p60)
mm9_v1_chr4_-_126002442_126002551	0.0474002	FOX{I1,J2}.p2	AB027138|Tekt2|24084|tektin 2	NM_011902|Tekt2|24084|tektin 2	BC008140|Tekt2|24084|tektin 2
mm9_v1_chr7_+_112789644_112789816	0.0473685	FOX{I1,J2}.p2	
mm9_v1_chr2_-_25110892_25110940	0.0472125	FOX{I1,J2}.p2	BC049789|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK163207|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK143124|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK169885|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	AK019617|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1	NM_001082476|Ndor1|78797|NADPH dependent diflavin oxidoreductase 1
mm9_v1_chr7_+_27814096_27814122	0.0472107	FOX{I1,J2}.p2	BC018356|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	NM_133657|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	BC094017|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12	L06463|Cyp2a12|13085|cytochrome P450, family 2, subfamily a, polypeptide 12
mm9_v1_chr17_+_34701239_34701309	0.0471618	FOX{I1,J2}.p2	NM_010929|Notch4|18132|Notch gene homolog 4 (Drosophila)	AK166261|Notch4|18132|Notch gene homolog 4 (Drosophila)	AK166493|Notch4|18132|Notch gene homolog 4 (Drosophila)	M80456|Notch4|18132|Notch gene homolog 4 (Drosophila)	BC138044|Notch4|18132|Notch gene homolog 4 (Drosophila)	BC145114|Notch4|18132|Notch gene homolog 4 (Drosophila)
mm9_v1_chr4_-_142889312_142889356	0.0467739	FOX{I1,J2}.p2	M73748|Pdpn|14726|podoplanin	BC026551|Pdpn|14726|podoplanin
mm9_v1_chr6_-_29114604_29114752	0.0467391	FOX{I1,J2}.p2	BC024602|Rbm28|68272|RNA binding motif protein 28	AK156773|Rbm28|68272|RNA binding motif protein 28	BC040811|Rbm28|68272|RNA binding motif protein 28	AK012408|Rbm28|68272|RNA binding motif protein 28	AK019296|Rbm28|68272|RNA binding motif protein 28	AK019436|Rbm28|68272|RNA binding motif protein 28	AK161670|Rbm28|68272|RNA binding motif protein 28	AK013047|Rbm28|68272|RNA binding motif protein 28	AK167050|Rbm28|68272|RNA binding motif protein 28	NM_133925|Rbm28|68272|RNA binding motif protein 28
mm9_v1_chr17_-_25934035_25934080	0.0467163	FOX{I1,J2}.p2	BC132177|Metrn|70083|meteorin, glial cell differentiation regulator
mm9_v1_chr9_+_65246331_65246350	0.0466418	FOX{I1,J2}.p2	AK014511|Rasl12|70784|RAS-like, family 12	AK163068|Rasl12|70784|RAS-like, family 12	AK048176|Rasl12|70784|RAS-like, family 12	AK171623|Rasl12|70784|RAS-like, family 12
mm9_v1_chr3_+_138190223_138190257	0.0466068	FOX{I1,J2}.p2	AK167097|Eif4e|13684|eukaryotic translation initiation factor 4E	M61731|Eif4e|13684|eukaryotic translation initiation factor 4E	AK082867|Eif4e|13684|eukaryotic translation initiation factor 4E	AK146757|Eif4e|13684|eukaryotic translation initiation factor 4E	BC010759|Eif4e|13684|eukaryotic translation initiation factor 4E	BC085087|Eif4e|13684|eukaryotic translation initiation factor 4E
mm9_v1_chr2_-_113057189_113057202	0.0461923	FOX{I1,J2}.p2	BC116740|Ryr3|20192|ryanodine receptor 3	BC116742|Ryr3|20192|ryanodine receptor 3	BC144719|Ryr3|20192|ryanodine receptor 3
mm9_v1_chr11_-_51449370_51449402	0.0460112	FOX{I1,J2}.p2	AK075599|Rmnd5b|66089|required for meiotic nuclear division 5 homolog B (S. cerevisiae)	NM_025346|Rmnd5b|66089|required for meiotic nuclear division 5 homolog B (S. cerevisiae)
mm9_v1_chr3_+_95392855_95392908	0.0458386	FOX{I1,J2}.p2	NM_001177669|Golph3l|229593|golgi phosphoprotein 3-like	NM_001177670|Golph3l|229593|golgi phosphoprotein 3-like	NM_146133|Golph3l|229593|golgi phosphoprotein 3-like	BC047147|Golph3l|229593|golgi phosphoprotein 3-like	AK008434|Golph3l|229593|golgi phosphoprotein 3-like	AK089547|Golph3l|229593|golgi phosphoprotein 3-like	AK160454|Golph3l|229593|golgi phosphoprotein 3-like	AK169724|Golph3l|229593|golgi phosphoprotein 3-like	AK167675|Golph3l|229593|golgi phosphoprotein 3-like
mm9_v1_chr6_+_30758582_30758676	0.045703	FOX{I1,J2}.p2	AK014219|Copg2as2|100044236|coatomer protein complex, subunit gamma 2, antisense 2
mm9_v1_chr17_+_32421723_32421761	0.0454763	FOX{I1,J2}.p2	
mm9_v1_chr2_-_80287349_80287399	0.0453867	FOX{I1,J2}.p2	U88568|Frzb|20378|frizzled-related protein	BC016884|Frzb|20378|frizzled-related protein
mm9_v1_chr9_+_117161650_117161701	0.0452787	FOX{I1,J2}.p2	
mm9_v1_chr6_+_113408650_113408888	0.0452148	FOX{I1,J2}.p2	AK169498|Il17re|57890|interleukin 17 receptor E	AK044815|Il17re|57890|interleukin 17 receptor E	BC069861|Il17re|57890|interleukin 17 receptor E	AK046713|Il17re|57890|interleukin 17 receptor E	AF458068|Il17re|57890|interleukin 17 receptor E	DQ092339|Il17re|57890|interleukin 17 receptor E	DQ092340|Il17re|57890|interleukin 17 receptor E	DQ092341|Il17re|57890|interleukin 17 receptor E	NM_001034029|Il17re|57890|interleukin 17 receptor E	NM_001034031|Il17re|57890|interleukin 17 receptor E
mm9_v1_chr11_-_72609515_72609577	0.0450793	FOX{I1,J2}.p2	AK138991|Cyb5d2|192986|cytochrome b5 domain containing 2	AK034043|Cyb5d2|192986|cytochrome b5 domain containing 2	AK080730|Cyb5d2|192986|cytochrome b5 domain containing 2
mm9_v1_chr4_+_141000576_141000628	0.0449219	FOX{I1,J2}.p2	NM_009541|Zbtb17|22642|zinc finger and BTB domain containing 17	U14556|Zbtb17|22642|zinc finger and BTB domain containing 17	AK051971|Zbtb17|22642|zinc finger and BTB domain containing 17	U22396|Zbtb17|22642|zinc finger and BTB domain containing 17	BC060055|Zbtb17|22642|zinc finger and BTB domain containing 17	AK134251|Zbtb17|22642|zinc finger and BTB domain containing 17
mm9_v1_chr13_+_55802874_55802961	0.0447269	FOX{I1,J2}.p2	BC006718|B230219D22Rik|78521|RIKEN cDNA B230219D22 gene
mm9_v1_chr3_-_92289795_92289819	0.0446678	FOX{I1,J2}.p2	X91824|Sprr1a|20753|small proline-rich protein 1A	BC027534|Sprr1a|20753|small proline-rich protein 1A	NM_009264|Sprr1a|20753|small proline-rich protein 1A	AK144782|Sprr1a|20753|small proline-rich protein 1A
mm9_v1_chr1_-_72583137_72583137	0.0445868	FOX{I1,J2}.p2	BC098191|March4|381270|membrane-associated ring finger (C3HC4) 4	NM_001045533|March4|381270|membrane-associated ring finger (C3HC4) 4
mm9_v1_chr11_+_30785357_30785392	0.0443864	FOX{I1,J2}.p2	AK141614|Gpr75|237716|G protein-coupled receptor 75
mm9_v1_chr19_+_30307417_30307431	0.0442031	FOX{I1,J2}.p2	AK149484|Mbl2|17195|mannose-binding lectin (protein C) 2	S42294|Mbl2|17195|mannose-binding lectin (protein C) 2	BC010760|Mbl2|17195|mannose-binding lectin (protein C) 2
mm9_v1_chr1_-_171899306_171899335	0.0441696	FOX{I1,J2}.p2	Y15733|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7	AK077914|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7	NM_010476|Hsd17b7|15490|hydroxysteroid (17-beta) dehydrogenase 7
mm9_v1_chr1_+_45390415_45390462	0.0440599	FOX{I1,J2}.p2	BC039923|Col3a1|12825|collagen, type III, alpha 1
mm9_v1_chr11_+_17111895_17111966	0.0440289	FOX{I1,J2}.p2	NM_178909|Wdr92|103784|WD repeat domain 92	AK088218|Wdr92|103784|WD repeat domain 92	AK047691|Wdr92|103784|WD repeat domain 92	AK142228|Wdr92|103784|WD repeat domain 92	AK033294|Wdr92|103784|WD repeat domain 92	BC096540|Wdr92|103784|WD repeat domain 92
mm9_v1_chr6_-_5248235_5248333	0.0438526	FOX{I1,J2}.p2	BC037140|Pon2|330260|paraoxonase 2	L48514|Pon2|330260|paraoxonase 2	AK152351|Pon2|330260|paraoxonase 2	AK171926|Pon2|330260|paraoxonase 2	BC021887|Pon2|330260|paraoxonase 2
mm9_v1_chr4_-_96330805_96330814	0.0438384	FOX{I1,J2}.p2	AK143932|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5	NM_010007|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5
mm9_v1_chr4_-_128483355_128483429	0.0437997	FOX{I1,J2}.p2	NM_001081098|Zfp362|230761|zinc finger protein 362
mm9_v1_chr19_+_8797973_8797989	0.0437577	FOX{I1,J2}.p2	AK036616|Snhg1|83673|small nucleolar RNA host gene (non-protein coding) 1	AK043166|Snhg1|83673|small nucleolar RNA host gene (non-protein coding) 1	AK051045|Snhg1|83673|small nucleolar RNA host gene (non-protein coding) 1
mm9_v1_chr7_+_135047661_135047661	0.0437514	FOX{I1,J2}.p2	AK075602|Bckdk|12041|branched chain ketoacid dehydrogenase kinase
mm9_v1_chr11_+_51085400_51085500	0.0437082	FOX{I1,J2}.p2	AF005423|Clk4|12750|CDC like kinase 4	AK161739|Clk4|12750|CDC like kinase 4
mm9_v1_chr15_-_66332402_66332471	0.0435205	FOX{I1,J2}.p2	AF092208|Lrrc6|54562|leucine rich repeat containing 6 (testis)	BC046277|Lrrc6|54562|leucine rich repeat containing 6 (testis)	AK077124|Lrrc6|54562|leucine rich repeat containing 6 (testis)	AK016236|Lrrc6|54562|leucine rich repeat containing 6 (testis)	NM_019457|Lrrc6|54562|leucine rich repeat containing 6 (testis)
mm9_v1_chr5_-_104450856_104450959	0.0432702	FOX{I1,J2}.p2	AK049355|Hsd17b11|114664|hydroxysteroid (17-beta) dehydrogenase 11
mm9_v1_chr2_+_152987036_152987075	0.0432559	FOX{I1,J2}.p2	NM_133847|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK083541|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC116320|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK035622|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr1_+_175980505_175980507	0.0431606	FOX{I1,J2}.p2	BC106793|Olfr432|258711|olfactory receptor 432	NM_146716|Olfr432|258711|olfactory receptor 432	BC106792|Olfr432|258711|olfactory receptor 432
mm9_v1_chr3_+_41368846_41368849	0.0429662	FOX{I1,J2}.p2	AK129445|Phf17|269424|PHD finger protein 17
mm9_v1_chr11_-_61575474_61575589	0.0428729	FOX{I1,J2}.p2	BC051438|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC106185|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK076811|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK077330|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	AK038680|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	BC023178|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164242|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164243|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_001164244|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2	NM_144806|Prpsap2|212627|phosphoribosyl pyrophosphate synthetase-associated protein 2
mm9_v1_chr19_+_5912952_5912986	0.0426667	FOX{I1,J2}.p2	
mm9_v1_chr5_+_91456489_91456542	0.0425987	FOX{I1,J2}.p2	BC119291|Epgn|71920|epithelial mitogen	BC119293|Epgn|71920|epithelial mitogen	BC145041|Epgn|71920|epithelial mitogen	AJ291391|Epgn|71920|epithelial mitogen	NM_053087|Epgn|71920|epithelial mitogen
mm9_v1_chr10_+_127707555_127707756	0.0425983	FOX{I1,J2}.p2	AK149924|Stat2|20847|signal transducer and activator of transcription 2	AK150070|Stat2|20847|signal transducer and activator of transcription 2	AK149838|Stat2|20847|signal transducer and activator of transcription 2	AF187231|Stat2|20847|signal transducer and activator of transcription 2	AF206162|Stat2|20847|signal transducer and activator of transcription 2	NM_019963|Stat2|20847|signal transducer and activator of transcription 2	AF088862|Stat2|20847|signal transducer and activator of transcription 2
mm9_v1_chr17_-_38557129_38557129	0.0424788	FOX{I1,J2}.p2	AB307016|Esp36|100126765|exocrine gland-secreting peptide 36	NM_001177587|Esp36|100126765|exocrine gland-secreting peptide 36
mm9_v1_chr19_-_55201631_55201725	0.0424647	FOX{I1,J2}.p2	AK137067|Gpam|14732|glycerol-3-phosphate acyltransferase, mitochondrial
mm9_v1_chr11_+_17157549_17157664	0.042205	FOX{I1,J2}.p2	X95591|C1d|57316|C1D nuclear receptor co-repressor	AK028702|C1d|57316|C1D nuclear receptor co-repressor	AK035169|C1d|57316|C1D nuclear receptor co-repressor	NM_020558|C1d|57316|C1D nuclear receptor co-repressor	BC005436|C1d|57316|C1D nuclear receptor co-repressor
mm9_v1_chr1_-_75139207_75139284	0.0420814	FOX{I1,J2}.p2	AK169779|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene	AK145962|1810031K17Rik|69171|RIKEN cDNA 1810031K17 gene
mm9_v1_chr4_+_120550473_120550605	0.0417966	FOX{I1,J2}.p2	AY326953|Rims3|242662|regulating synaptic membrane exocytosis 3	BC115536|Rims3|242662|regulating synaptic membrane exocytosis 3	NM_182929|Rims3|242662|regulating synaptic membrane exocytosis 3	AK122226|Rims3|242662|regulating synaptic membrane exocytosis 3
mm9_v1_chr3_-_58984006_58984035	0.0417266	FOX{I1,J2}.p2	AF295366|Gpr87|84111|G protein-coupled receptor 87	NM_032399|Gpr87|84111|G protein-coupled receptor 87	BC125653|Gpr87|84111|G protein-coupled receptor 87	BC125655|Gpr87|84111|G protein-coupled receptor 87
mm9_v1_chr14_-_73725611_73725643	0.0417204	FOX{I1,J2}.p2	AK141028|Rb1|19645|retinoblastoma 1
mm9_v1_chr4_+_155186568_155186886	0.0417127	FOX{I1,J2}.p2	NM_207678|Ccnl2|56036|cyclin L2	AK007552|Ccnl2|56036|cyclin L2	BC132295|Ccnl2|56036|cyclin L2	AK048244|Ccnl2|56036|cyclin L2	AK156037|Ccnl2|56036|cyclin L2	AB041605|Ccnl2|56036|cyclin L2	AY337018|Ccnl2|56036|cyclin L2	AK169857|Ccnl2|56036|cyclin L2	BC023747|Ccnl2|56036|cyclin L2	AF211859|Ccnl2|56036|cyclin L2	AK044204|Ccnl2|56036|cyclin L2	AK008585|Ccnl2|56036|cyclin L2	AK138938|Ccnl2|56036|cyclin L2
mm9_v1_chr5_+_117724658_117724663	0.0415355	FOX{I1,J2}.p2	AK013486|Taok3|330177|TAO kinase 3
mm9_v1_chr7_+_5035137_5035428	0.0414886	FOX{I1,J2}.p2	BC046962|Epn1|13854|epsin 1
mm9_v1_chr3_-_117571853_117571885	0.0411567	FOX{I1,J2}.p2	AK038971|Snx7|76561|sorting nexin 7	NM_001190156|Snx7|76561|sorting nexin 7	NM_029655|Snx7|76561|sorting nexin 7
mm9_v1_chr3_-_30498769_30498835	0.0410112	FOX{I1,J2}.p2	AK007208|Arpm1|76652|actin related protein M1	AK047260|Arpm1|76652|actin related protein M1	NM_029690|Arpm1|76652|actin related protein M1	BC107277|Arpm1|76652|actin related protein M1	BC107278|Arpm1|76652|actin related protein M1
mm9_v1_chr10_+_41530379_41530379	0.0409148	FOX{I1,J2}.p2	BC100403|Sesn1|140742|sestrin 1	NM_001162908|Sesn1|140742|sestrin 1
mm9_v1_chr3_+_95392919_95392945	0.0408901	FOX{I1,J2}.p2	BC027194|Golph3l|229593|golgi phosphoprotein 3-like
mm9_v1_chr6_-_92431385_92431385	0.0408663	FOX{I1,J2}.p2	AK020123|Prickle2|243548|prickle homolog 2 (Drosophila)	AK032631|Prickle2|243548|prickle homolog 2 (Drosophila)	NM_001134460|Prickle2|243548|prickle homolog 2 (Drosophila)
mm9_v1_chr1_+_79772668_79772831	0.0406749	FOX{I1,J2}.p2	AK156814|Mrpl44|69163|mitochondrial ribosomal protein L44	AK019986|Mrpl44|69163|mitochondrial ribosomal protein L44	AK146024|Mrpl44|69163|mitochondrial ribosomal protein L44	AK150537|Mrpl44|69163|mitochondrial ribosomal protein L44	AK151854|Mrpl44|69163|mitochondrial ribosomal protein L44
mm9_v1_chr9_+_26807281_26807337	0.040544	FOX{I1,J2}.p2	AK021335|Thyn1|77862|thymocyte nuclear protein 1	AK077639|Thyn1|77862|thymocyte nuclear protein 1	BC016594|Thyn1|77862|thymocyte nuclear protein 1	AB080370|Thyn1|77862|thymocyte nuclear protein 1
mm9_v1_chr17_-_35810624_35810662	0.040439	FOX{I1,J2}.p2	AF054823|Gtf2h4|14885|general transcription factor II H, polypeptide 4	NM_010364|Gtf2h4|14885|general transcription factor II H, polypeptide 4	BC055889|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK079456|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK088296|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK144680|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK146112|Gtf2h4|14885|general transcription factor II H, polypeptide 4	AK149320|Gtf2h4|14885|general transcription factor II H, polypeptide 4
mm9_v1_chr9_-_31720846_31720869	0.0403689	FOX{I1,J2}.p2	BC012684|Barx2|12023|BarH-like homeobox 2	NM_013800|Barx2|12023|BarH-like homeobox 2
mm9_v1_chr9_+_75623899_75624064	0.0403204	FOX{I1,J2}.p2	L41145|Bmp5|12160|bone morphogenetic protein 5	BC100751|Bmp5|12160|bone morphogenetic protein 5	BC100752|Bmp5|12160|bone morphogenetic protein 5	BC100753|Bmp5|12160|bone morphogenetic protein 5	BC100754|Bmp5|12160|bone morphogenetic protein 5	AK160412|Bmp5|12160|bone morphogenetic protein 5
mm9_v1_chr18_+_37571327_37571327	0.0403148	FOX{I1,J2}.p2	NM_053135|Pcdhb10|93881|protocadherin beta 10
mm9_v1_chr5_-_22056086_22056211	0.0402933	FOX{I1,J2}.p2	AK166537|Orc5|26429|origin recognition complex, subunit 5	AK169683|Orc5|26429|origin recognition complex, subunit 5	AJ007360|Orc5|26429|origin recognition complex, subunit 5	AK144983|Orc5|26429|origin recognition complex, subunit 5	NM_011959|Orc5|26429|origin recognition complex, subunit 5	AK165912|Orc5|26429|origin recognition complex, subunit 5	BC006927|Orc5|26429|origin recognition complex, subunit 5	AK084683|Orc5|26429|origin recognition complex, subunit 5
mm9_v1_chr11_+_87032504_87032509	0.0398858	FOX{I1,J2}.p2	AK004018|Trim37|68729|tripartite motif-containing 37
mm9_v1_chr5_-_31490075_31490203	0.0398087	FOX{I1,J2}.p2	
mm9_v1_chr1_+_174078246_174078256	0.0395404	FOX{I1,J2}.p2	AK035701|Dcaf8|98193|DDB1 and CUL4 associated factor 8
mm9_v1_chr4_+_5726856_5726857	0.0393827	FOX{I1,J2}.p2	AK049898|Fam110b|242297|family with sequence similarity 110, member B
mm9_v1_chr2_-_87552060_87552060	0.0393388	FOX{I1,J2}.p2	NM_001011833|Olfr1137|258101|olfactory receptor 1137
mm9_v1_chr14_-_104243474_104243491	0.0388824	FOX{I1,J2}.p2	AK082103|Ednrb|13618|endothelin receptor type B
mm9_v1_chr17_+_26275630_26275910	0.0388773	FOX{I1,J2}.p2	NM_001159598|Axin1|12005|axin 1	NM_009733|Axin1|12005|axin 1	AF009011|Axin1|12005|axin 1	BC113171|Axin1|12005|axin 1	BC011544|Axin1|12005|axin 1
mm9_v1_chr1_+_121903556_121903630	0.0388485	FOX{I1,J2}.p2	AK032652|Sctr|319229|secretin receptor	NM_001012322|Sctr|319229|secretin receptor	BC089355|Sctr|319229|secretin receptor
mm9_v1_chr9_-_115152261_115152330	0.0381881	FOX{I1,J2}.p2	
mm9_v1_chr7_+_110477001_110477001	0.0381491	FOX{I1,J2}.p2	NM_001011793|Olfr598|257975|olfactory receptor 598
mm9_v1_chr7_+_115133880_115133880	0.0378399	FOX{I1,J2}.p2	NM_146926|Olfr477|258928|olfactory receptor 477
mm9_v1_chr7_+_19967358_19967392	0.037838	FOX{I1,J2}.p2	AK141692|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	AK082323|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	AK145969|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	AK082761|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	NM_007949|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2	BC034517|Ercc2|13871|excision repair cross-complementing rodent repair deficiency, complementation group 2
mm9_v1_chr12_+_114047124_114047205	0.0377244	FOX{I1,J2}.p2	AK161400|BC022687|217887|cDNA sequence BC022687	AK081297|BC022687|217887|cDNA sequence BC022687	BC090976|BC022687|217887|cDNA sequence BC022687	NM_145450|BC022687|217887|cDNA sequence BC022687
mm9_v1_chr10_-_18506598_18506598	0.0376545	FOX{I1,J2}.p2	AK030207|Gm4922|237300|predicted gene 4922	NM_177706|Gm4922|237300|predicted gene 4922
mm9_v1_chr2_-_180396124_180396180	0.0376369	FOX{I1,J2}.p2	AK031764|Dido1|23856|death inducer-obliterator 1
mm9_v1_chr9_-_66881744_66881755	0.037602	FOX{I1,J2}.p2	AK210663|Tpm1|22003|tropomyosin 1, alpha
mm9_v1_chr9_+_57351830_57351839	0.0373001	FOX{I1,J2}.p2	AK140177|Rpp25|102614|ribonuclease P 25 subunit (human)	AK082822|Rpp25|102614|ribonuclease P 25 subunit (human)
mm9_v1_chr15_-_34424900_34424913	0.0372815	FOX{I1,J2}.p2	BC125590|Hrsp12|15473|heat-responsive protein 12	BC125592|Hrsp12|15473|heat-responsive protein 12
mm9_v1_chr7_-_112959577_112959585	0.0371857	FOX{I1,J2}.p2	AK007828|Mrpl17|27397|mitochondrial ribosomal protein L17
mm9_v1_chrX_+_20126893_20126943	0.037146	FOX{I1,J2}.p2	AK146465|Rgn|19733|regucalcin	BC012710|Rgn|19733|regucalcin	NM_009060|Rgn|19733|regucalcin	U28937|Rgn|19733|regucalcin
mm9_v1_chr9_+_13632152_13632249	0.0370768	FOX{I1,J2}.p2	AK145026|Fam76b|72826|family with sequence similarity 76, member B	BC043120|Fam76b|72826|family with sequence similarity 76, member B	NM_176836|Fam76b|72826|family with sequence similarity 76, member B	AK052430|Fam76b|72826|family with sequence similarity 76, member B	BC050870|Fam76b|72826|family with sequence similarity 76, member B
mm9_v1_chr7_-_31411089_31411143	0.0370094	FOX{I1,J2}.p2	AK018721|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1	BC024343|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1	AK012686|Cox6b1|110323|cytochrome c oxidase, subunit VIb polypeptide 1
mm9_v1_chr2_+_163428044_163428072	0.037003	FOX{I1,J2}.p2	AK039450|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_029512|Ttpal|76080|tocopherol (alpha) transfer protein-like	NM_181734|Ttpal|76080|tocopherol (alpha) transfer protein-like
mm9_v1_chr13_+_49063750_49063790	0.0369692	FOX{I1,J2}.p2	AK014080|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene	AK021143|C030044B11Rik|68128|RIKEN cDNA C030044B11 gene
mm9_v1_chr8_+_131028275_131028322	0.0369533	FOX{I1,J2}.p2	AK002673|Nrp1|18186|neuropilin 1
mm9_v1_chr1_+_138311847_138311988	0.0368674	FOX{I1,J2}.p2	AK004833|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	NM_026500|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	AK013179|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	AK133731|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	AK076462|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59	BC023840|Ddx59|67997|DEAD (Asp-Glu-Ala-Asp) box polypeptide 59
mm9_v1_chr1_-_63223190_63223282	0.0367683	FOX{I1,J2}.p2	BC015300|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK166604|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK078590|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK167705|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK146814|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK036926|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	AK142711|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1	BC006660|Ndufs1|227197|NADH dehydrogenase (ubiquinone) Fe-S protein 1
mm9_v1_chr3_-_113277601_113277686	0.0366693	FOX{I1,J2}.p2	AK029642|Amy1|11722|amylase 1, salivary	NM_007446|Amy1|11722|amylase 1, salivary	V00719|Amy1|11722|amylase 1, salivary
mm9_v1_chr12_+_113826975_113827051	0.036278	FOX{I1,J2}.p2	DQ834374|Inf2|70435|inverted formin, FH2 and WH2 domain containing	NM_198411|Inf2|70435|inverted formin, FH2 and WH2 domain containing
mm9_v1_chr8_+_94192087_94192089	0.0362738	FOX{I1,J2}.p2	
mm9_v1_chr15_-_31522411_31522489	0.0361071	FOX{I1,J2}.p2	AK219685|Cct5|12465|chaperonin containing Tcp1, subunit 5 (epsilon)	AK216446|Cct5|12465|chaperonin containing Tcp1, subunit 5 (epsilon)	AK213471|Cct5|12465|chaperonin containing Tcp1, subunit 5 (epsilon)
mm9_v1_chr14_+_51715674_51715674	0.0360416	FOX{I1,J2}.p2	AK159966|Ang|11727|angiogenin, ribonuclease, RNase A family, 5	NM_007447|Ang|11727|angiogenin, ribonuclease, RNase A family, 5	NM_201239|Rnase4|58809|ribonuclease, RNase A family 4
mm9_v1_chr13_+_67931962_67932042	0.0357341	FOX{I1,J2}.p2	BC100427|Gm10037|328280|predicted gene 10037
mm9_v1_chr2_-_101489613_101489698	0.0357042	FOX{I1,J2}.p2	BC138342|Rag1|19373|recombination activating gene 1	M29475|Rag1|19373|recombination activating gene 1	AK088725|Rag1|19373|recombination activating gene 1	AK162974|Rag1|19373|recombination activating gene 1	DQ112091|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	DQ112092|B230118H07Rik|68170|RIKEN cDNA B230118H07 gene	NM_009019|Rag1|19373|recombination activating gene 1
mm9_v1_chr10_+_126415772_126415772	0.0355504	FOX{I1,J2}.p2	BC085142|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2	NM_001113470|Ctdsp2|52468|CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase 2
mm9_v1_chr12_-_25323807_25323931	0.0354252	FOX{I1,J2}.p2	AK216072|Cox7a2l|20463|cytochrome c oxidase subunit VIIa polypeptide 2-like
mm9_v1_chr13_-_104968472_104968556	0.0352475	FOX{I1,J2}.p2	BC021756|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK084373|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK013956|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK167749|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK012141|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK010346|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK163342|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	AK149832|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_001093759|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_001093760|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene	NM_025879|2410002O22Rik|66975|RIKEN cDNA 2410002O22 gene
mm9_v1_chr11_-_120668581_120668636	0.0352008	FOX{I1,J2}.p2	AK078721|Fasn|14104|fatty acid synthase
mm9_v1_chr9_+_32031833_32031859	0.0351843	FOX{I1,J2}.p2	NM_177379|Arhgap32|330914|Rho GTPase activating protein 32
mm9_v1_chr11_+_17853972_17854004	0.0351005	FOX{I1,J2}.p2	AK013680|2900053O20Rik|72971|RIKEN cDNA 2900053O20 gene	AK019730|2900053O20Rik|72971|RIKEN cDNA 2900053O20 gene
mm9_v1_chr4_-_40883509_40883654	0.034994	FOX{I1,J2}.p2	AK184952|Bag1|12017|BCL2-associated athanogene 1	AK213721|Bag1|12017|BCL2-associated athanogene 1	AK216811|Bag1|12017|BCL2-associated athanogene 1
mm9_v1_chr7_-_90943328_90943348	0.0348789	FOX{I1,J2}.p2	BC048079|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	AK006375|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	BC061016|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene	NM_029335|1700026D08Rik|75556|RIKEN cDNA 1700026D08 gene
mm9_v1_chr7_+_28376578_28376874	0.0347564	FOX{I1,J2}.p2	AK158792|Akt2|11652|thymoma viral proto-oncogene 2	NM_001110208|Akt2|11652|thymoma viral proto-oncogene 2	AK144217|Akt2|11652|thymoma viral proto-oncogene 2	U22445|Akt2|11652|thymoma viral proto-oncogene 2
mm9_v1_chr12_+_110806715_110806837	0.0347208	FOX{I1,J2}.p2	AK148955|Meg3|17263|maternally expressed 3
mm9_v1_chr17_+_47641999_47642189	0.0346955	FOX{I1,J2}.p2	NM_001081635|Ccnd3|12445|cyclin D3	NM_001081636|Ccnd3|12445|cyclin D3	AK161758|Ccnd3|12445|cyclin D3	AK083384|Ccnd3|12445|cyclin D3	AK020317|Ccnd3|12445|cyclin D3
mm9_v1_chr2_-_163450863_163450871	0.0346447	FOX{I1,J2}.p2	AK003471|Serinc3|26943|serine incorporator 3
mm9_v1_chr8_+_28090358_28090406	0.0346159	FOX{I1,J2}.p2	
mm9_v1_chr17_-_36394771_36394836	0.0346073	FOX{I1,J2}.p2	AK003455|Rpp21|67676|ribonuclease P 21 subunit (human)	AK002780|Rpp21|67676|ribonuclease P 21 subunit (human)	NM_026308|Rpp21|67676|ribonuclease P 21 subunit (human)	AJ504717|Rpp21|67676|ribonuclease P 21 subunit (human)	AY251016|Rpp21|67676|ribonuclease P 21 subunit (human)	AY251017|Rpp21|67676|ribonuclease P 21 subunit (human)	BC028491|Rpp21|67676|ribonuclease P 21 subunit (human)
mm9_v1_chr11_+_3863948_3864033	0.0344694	FOX{I1,J2}.p2	AK029075|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	NM_022889|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	BC004844|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	BC011142|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AK088831|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AF289539|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)	AK220142|Pes1|64934|pescadillo homolog 1, containing BRCT domain (zebrafish)
mm9_v1_chr3_-_105746659_105746682	0.0343277	FOX{I1,J2}.p2	U29530|Atp5f1|11950|ATP synthase, H+ transporting, mitochondrial F0 complex, subunit B1
mm9_v1_chr14_-_66696533_66696571	0.034169	FOX{I1,J2}.p2	AK161261|Adam2|11495|a disintegrin and metallopeptidase domain 2	AK161266|Adam2|11495|a disintegrin and metallopeptidase domain 2	U16242|Adam2|11495|a disintegrin and metallopeptidase domain 2	AK016550|Adam2|11495|a disintegrin and metallopeptidase domain 2	NM_009618|Adam2|11495|a disintegrin and metallopeptidase domain 2	U38806|Adam2|11495|a disintegrin and metallopeptidase domain 2
mm9_v1_chr7_-_139749889_139749896	0.0340162	FOX{I1,J2}.p2	
mm9_v1_chr2_+_31951149_31951239	0.0338943	FOX{I1,J2}.p2	AK052883|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3	NM_145521|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3	BC016136|Ppapdc3|227721|phosphatidic acid phosphatase type 2 domain containing 3
mm9_v1_chr1_+_72354084_72354123	0.0338214	FOX{I1,J2}.p2	X66323|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AF166486|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK010416|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK167312|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK168913|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	AK169838|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5	BC029218|Xrcc5|22596|X-ray repair complementing defective repair in Chinese hamster cells 5
mm9_v1_chr16_-_20425991_20426058	0.0337619	FOX{I1,J2}.p2	AK050565|Abcc5|27416|ATP-binding cassette, sub-family C (CFTR/MRP), member 5
mm9_v1_chr16_+_32332294_32332380	0.0334951	FOX{I1,J2}.p2	NM_177633|Ubxn7|224111|UBX domain protein 7	AK147730|Ubxn7|224111|UBX domain protein 7	BC062904|Ubxn7|224111|UBX domain protein 7
mm9_v1_chr6_+_134961629_134961652	0.0334869	FOX{I1,J2}.p2	NM_026360|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK010310|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132242|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC132244|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	AK076982|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC060168|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47	BC095944|Ddx47|67755|DEAD (Asp-Glu-Ala-Asp) box polypeptide 47
mm9_v1_chr1_+_88051331_88051402	0.0334409	FOX{I1,J2}.p2	AK164041|Armc9|78795|armadillo repeat containing 9	NM_030184|Armc9|78795|armadillo repeat containing 9	AK030307|Armc9|78795|armadillo repeat containing 9	AK140598|Armc9|78795|armadillo repeat containing 9	AK019512|Armc9|78795|armadillo repeat containing 9	AK019600|Armc9|78795|armadillo repeat containing 9	AK046693|Armc9|78795|armadillo repeat containing 9	AK048064|Armc9|78795|armadillo repeat containing 9	AK039800|Armc9|78795|armadillo repeat containing 9	AK014450|Armc9|78795|armadillo repeat containing 9	AK036083|Armc9|78795|armadillo repeat containing 9	AK161393|Armc9|78795|armadillo repeat containing 9	AK017564|Armc9|78795|armadillo repeat containing 9	NM_027456|Armc9|78795|armadillo repeat containing 9	AK045699|Armc9|78795|armadillo repeat containing 9	BC043101|Armc9|78795|armadillo repeat containing 9
mm9_v1_chr13_-_24923314_24923388	0.0331912	FOX{I1,J2}.p2	AK008624|Acot13|66834|acyl-CoA thioesterase 13	BC018165|Acot13|66834|acyl-CoA thioesterase 13	BC096567|Acot13|66834|acyl-CoA thioesterase 13	AK002261|Acot13|66834|acyl-CoA thioesterase 13	NM_025790|Acot13|66834|acyl-CoA thioesterase 13	AK144523|Acot13|66834|acyl-CoA thioesterase 13
mm9_v1_chr19_-_4175478_4175577	0.033133	FOX{I1,J2}.p2	NM_134148|Carns1|107239|carnosine synthase 1
mm9_v1_chrX_+_35542969_35543017	0.0330412	FOX{I1,J2}.p2	NM_001079513|Zbtb33|56805|zinc finger and BTB domain containing 33	NM_020256|Zbtb33|56805|zinc finger and BTB domain containing 33	AK087417|Zbtb33|56805|zinc finger and BTB domain containing 33	AK089423|Zbtb33|56805|zinc finger and BTB domain containing 33	AF097416|Zbtb33|56805|zinc finger and BTB domain containing 33
mm9_v1_chr11_+_80022573_80022582	0.0328995	FOX{I1,J2}.p2	BC046785|Rhot1|59040|ras homolog gene family, member T1	AK147749|Rhot1|59040|ras homolog gene family, member T1
mm9_v1_chr17_+_36974140_36974211	0.0328736	FOX{I1,J2}.p2	AK148247|Trim26|22670|tripartite motif-containing 26
mm9_v1_chr1_-_74982118_74982188	0.0328356	FOX{I1,J2}.p2	BC150939|Ccdc108|241116|coiled-coil domain containing 108	AK038623|Ccdc108|241116|coiled-coil domain containing 108	AK046272|Ccdc108|241116|coiled-coil domain containing 108	AK133278|Ccdc108|241116|coiled-coil domain containing 108	NM_001039495|Ccdc108|241116|coiled-coil domain containing 108
mm9_v1_chr9_+_107479326_107479334	0.0328123	FOX{I1,J2}.p2	AF422176|Hyal1|15586|hyaluronoglucosaminidase 1
mm9_v1_chr18_-_56732585_56732592	0.0325852	FOX{I1,J2}.p2	NM_001127338|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr18_+_37911236_37911432	0.0325277	FOX{I1,J2}.p2	BC066823|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	AY013809|Pcdhgb7|93704|protocadherin gamma subfamily B, 7	NM_033579|Pcdhgb7|93704|protocadherin gamma subfamily B, 7
mm9_v1_chr9_-_102256709_102256791	0.0324327	FOX{I1,J2}.p2	AK036148|Ephb1|270190|Eph receptor B1
mm9_v1_chr19_-_39815590_39815597	0.032359	FOX{I1,J2}.p2	NM_001039555|Cyp2c68|433247|cytochrome P450, family 2, subfamily c, polypeptide 68
mm9_v1_chr7_-_97052120_97052138	0.0322539	FOX{I1,J2}.p2	AK014876|Ccdc81|70884|coiled-coil domain containing 81	BC127049|Ccdc81|70884|coiled-coil domain containing 81	BC152307|Ccdc81|70884|coiled-coil domain containing 81	BC152308|Ccdc81|70884|coiled-coil domain containing 81	AK029544|Ccdc81|70884|coiled-coil domain containing 81	NM_001162979|Ccdc81|70884|coiled-coil domain containing 81
mm9_v1_chr2_-_9800211_9800245	0.0321857	FOX{I1,J2}.p2	AK156634|Gata3|14462|GATA binding protein 3	AK053728|Gata3|14462|GATA binding protein 3	AK090089|Gata3|14462|GATA binding protein 3	AK155549|Gata3|14462|GATA binding protein 3	NM_008091|Gata3|14462|GATA binding protein 3
mm9_v1_chr11_+_70338927_70338937	0.0321163	FOX{I1,J2}.p2	U13393|Psmb6|19175|proteasome (prosome, macropain) subunit, beta type 6
mm9_v1_chr9_+_57351848_57351908	0.0320441	FOX{I1,J2}.p2	BC083064|Rpp25|102614|ribonuclease P 25 subunit (human)	BC016085|Rpp25|102614|ribonuclease P 25 subunit (human)	NM_133982|Rpp25|102614|ribonuclease P 25 subunit (human)
mm9_v1_chr2_-_84567424_84567451	0.0320269	FOX{I1,J2}.p2	BC003237|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	NM_133840|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	AK053169|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)	AK169709|Clp1|98985|CLP1, cleavage and polyadenylation factor I subunit, homolog (S. cerevisiae)
mm9_v1_chr8_+_96561097_96561129	0.0319057	FOX{I1,J2}.p2	AK029629|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	NM_001093757|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	NM_177767|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK156765|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr2_+_163842411_163842512	0.0317665	FOX{I1,J2}.p2	AK199528|Ywhab|54401|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide
mm9_v1_chr2_+_76244559_76244570	0.0317295	FOX{I1,J2}.p2	AK004353|Osbpl6|99031|oxysterol binding protein-like 6
mm9_v1_chr7_+_140175699_140175731	0.0317146	FOX{I1,J2}.p2	AJ250693|Zranb1|360216|zinc finger, RAN-binding domain containing 1
mm9_v1_chr7_-_34926055_34926067	0.0316701	FOX{I1,J2}.p2	AK213025|Uba2|50995|ubiquitin-like modifier activating enzyme 2
mm9_v1_chrX_+_20235512_20235607	0.0314467	FOX{I1,J2}.p2	AK088057|Uba1|22201|ubiquitin-like modifier activating enzyme 1	AK088528|Uba1|22201|ubiquitin-like modifier activating enzyme 1	NM_009457|Uba1|22201|ubiquitin-like modifier activating enzyme 1	BC145984|Uba1|22201|ubiquitin-like modifier activating enzyme 1	BC138200|Uba1|22201|ubiquitin-like modifier activating enzyme 1	D10576|Uba1|22201|ubiquitin-like modifier activating enzyme 1
mm9_v1_chr2_-_144376513_144376606	0.0314312	FOX{I1,J2}.p2	AF039563|Rbbp9|26450|retinoblastoma binding protein 9	BC050201|Rbbp9|26450|retinoblastoma binding protein 9	AK017606|Rbbp9|26450|retinoblastoma binding protein 9	BC011107|Rbbp9|26450|retinoblastoma binding protein 9	BC147814|Rbbp9|26450|retinoblastoma binding protein 9	BC147815|Rbbp9|26450|retinoblastoma binding protein 9	AK076944|Rbbp9|26450|retinoblastoma binding protein 9	NM_015754|Rbbp9|26450|retinoblastoma binding protein 9
mm9_v1_chr10_-_33927262_33927356	0.0314254	FOX{I1,J2}.p2	AK045065|Dse|212898|dermatan sulfate epimerase	BC053095|Dse|212898|dermatan sulfate epimerase	NM_172508|Dse|212898|dermatan sulfate epimerase
mm9_v1_chr4_-_96330738_96330780	0.0313556	FOX{I1,J2}.p2	AK098119|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5	U62294|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5	BC021624|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5	AK149552|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5
mm9_v1_chr5_-_87335956_87335985	0.0313007	FOX{I1,J2}.p2	BC028826|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	NM_153598|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34	AK145951|Ugt2b34|100727|UDP glucuronosyltransferase 2 family, polypeptide B34
mm9_v1_chr5_-_93611701_93611836	0.0309926	FOX{I1,J2}.p2	
mm9_v1_chr14_+_120830603_120830641	0.0309657	FOX{I1,J2}.p2	AK003316|Mbnl2|105559|muscleblind-like 2
mm9_v1_chr11_-_69572134_69572140	0.0307987	FOX{I1,J2}.p2	AK154270|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A	AK154389|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A	AK155391|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A
mm9_v1_chr12_+_17285655_17285671	0.0306983	FOX{I1,J2}.p2	AK179393|Pdia6|71853|protein disulfide isomerase associated 6
mm9_v1_chr12_+_74224693_74224793	0.0305546	FOX{I1,J2}.p2	AK048499|Mnat1|17420|menage a trois 1	AK155859|Mnat1|17420|menage a trois 1	NM_008612|Mnat1|17420|menage a trois 1	AK008249|Mnat1|17420|menage a trois 1	BC089023|Mnat1|17420|menage a trois 1	BC115630|Mnat1|17420|menage a trois 1	BC115631|Mnat1|17420|menage a trois 1	AK157721|Mnat1|17420|menage a trois 1	AK008134|Mnat1|17420|menage a trois 1	AK053621|Mnat1|17420|menage a trois 1	AK011833|Mnat1|17420|menage a trois 1	AK029174|Mnat1|17420|menage a trois 1
mm9_v1_chr16_+_31422377_31422406	0.0304839	FOX{I1,J2}.p2	BC043683|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1	NM_175177|Bdh1|71911|3-hydroxybutyrate dehydrogenase, type 1
mm9_v1_chr9_-_56533004_56533059	0.0304747	FOX{I1,J2}.p2	BC065696|Lingo1|235402|leucine rich repeat and Ig domain containing 1	BC052384|Lingo1|235402|leucine rich repeat and Ig domain containing 1	NM_181074|Lingo1|235402|leucine rich repeat and Ig domain containing 1
mm9_v1_chr11_-_97745402_97745467	0.030394	FOX{I1,J2}.p2	BC158049|Fbxo47|72973|F-box protein 47	NM_001081435|Fbxo47|72973|F-box protein 47
mm9_v1_chr2_+_26203297_26203537	0.0300424	FOX{I1,J2}.p2	AK007593|Gpsm1|67839|G-protein signalling modulator 1 (AGS3-like, C. elegans)	AK211070|Gpsm1|67839|G-protein signalling modulator 1 (AGS3-like, C. elegans)
mm9_v1_chr10_+_23908526_23908598	0.0298827	FOX{I1,J2}.p2	AK198523|Stx7|53331|syntaxin 7
mm9_v1_chr5_+_90890764_90890776	0.0297592	FOX{I1,J2}.p2	AK050644|Alb|11657|albumin
mm9_v1_chr11_+_102291759_102291826	0.0296325	FOX{I1,J2}.p2	AK018744|Grn|14824|granulin	AK013678|Grn|14824|granulin	AK147932|Grn|14824|granulin	AK149570|Grn|14824|granulin	AK150205|Grn|14824|granulin	AK150746|Grn|14824|granulin	AK150881|Grn|14824|granulin	AK151007|Grn|14824|granulin	AK151162|Grn|14824|granulin	AK151343|Grn|14824|granulin	AK151713|Grn|14824|granulin	AK152048|Grn|14824|granulin	AK152087|Grn|14824|granulin	AK152705|Grn|14824|granulin	AK152765|Grn|14824|granulin	AK153269|Grn|14824|granulin	AK153289|Grn|14824|granulin	AK153418|Grn|14824|granulin	AK153470|Grn|14824|granulin	AK154492|Grn|14824|granulin	AK160033|Grn|14824|granulin	AK159809|Grn|14824|granulin	AK150125|Grn|14824|granulin	AK151756|Grn|14824|granulin	AK150717|Grn|14824|granulin	AK159557|Grn|14824|granulin
mm9_v1_chrX_-_7182450_7182545	0.0295545	FOX{I1,J2}.p2	BC011195|Ccdc22|54638|coiled-coil domain containing 22	AK010536|Ccdc22|54638|coiled-coil domain containing 22	AF229637|Ccdc22|54638|coiled-coil domain containing 22	AK039573|Ccdc22|54638|coiled-coil domain containing 22	NM_138603|Ccdc22|54638|coiled-coil domain containing 22
mm9_v1_chr5_+_35341726_35341726	0.0294798	FOX{I1,J2}.p2	AK014569|Rgs12|71729|regulator of G-protein signaling 12	AK161129|Rgs12|71729|regulator of G-protein signaling 12	NM_001163512|Rgs12|71729|regulator of G-protein signaling 12
mm9_v1_chr8_-_19892900_19893049	0.0293062	FOX{I1,J2}.p2	AK036306|2610005L07Rik|381598|cadherin 11 pseudogene	AK135487|6820431F20Rik|547150|cadherin 11 pseudogene	BC064022|2610005L07Rik|381598|cadherin 11 pseudogene	AK033345|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK170069|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK083828|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK012880|2610005L07Rik|381598|cadherin 11 pseudogene	AK167066|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene	AK132389|A430108E01Rik|384382|RIKEN cDNA A430108E01 gene
mm9_v1_chr6_-_3349470_3349570	0.0292743	FOX{I1,J2}.p2	BC079894|Samd9l|209086|sterile alpha motif domain containing 9-like	AK052535|Samd9l|209086|sterile alpha motif domain containing 9-like	NM_010156|Samd9l|209086|sterile alpha motif domain containing 9-like
mm9_v1_chr5_+_13125413_13125592	0.0292337	FOX{I1,J2}.p2	AK166127|LOC100503462|100503462|hypothetical LOC100503462	AK052051|LOC100503462|100503462|hypothetical LOC100503462
mm9_v1_chr18_+_78012506_78012506	0.0292138	FOX{I1,J2}.p2	NM_007505|Atp5a1|11946|ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1
mm9_v1_chr8_+_96561135_96561146	0.0290145	FOX{I1,J2}.p2	AK049824|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	BC040267|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr10_-_39977451_39977507	0.0290097	FOX{I1,J2}.p2	AK005261|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	AK007816|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	AK162053|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	AK168070|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	AK010514|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	NM_026113|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha	BC048446|Gtf3c6|67371|general transcription factor IIIC, polypeptide 6, alpha
mm9_v1_chr11_-_69571681_69571794	0.0287487	FOX{I1,J2}.p2	BC114996|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A	NM_009089|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A	U37500|Polr2a|20020|polymerase (RNA) II (DNA directed) polypeptide A
mm9_v1_chrX_-_57400778_57400876	0.0287224	FOX{I1,J2}.p2	BC125435|Mcf2|109904|mcf.2 transforming sequence	AB052945|Mcf2|109904|mcf.2 transforming sequence	AB101616|Mcf2|109904|mcf.2 transforming sequence	NM_133197|Mcf2|109904|mcf.2 transforming sequence	AK032122|Mcf2|109904|mcf.2 transforming sequence
mm9_v1_chr9_+_18925400_18925400	0.0286833	FOX{I1,J2}.p2	BC106988|Olfr836|258557|olfactory receptor 836	BC106989|Olfr836|258557|olfactory receptor 836	NM_146564|Olfr836|258557|olfactory receptor 836
mm9_v1_chr6_+_145756902_145756931	0.0286717	FOX{I1,J2}.p2	AF424737|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	NM_027760|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC115779|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8	BC117546|Rassf8|71323|Ras association (RalGDS/AF-6) domain family (N-terminal) member 8
mm9_v1_chr2_+_49307005_49307084	0.0286606	FOX{I1,J2}.p2	NM_172663|Epc2|227867|enhancer of polycomb homolog 2 (Drosophila)	AK031025|Epc2|227867|enhancer of polycomb homolog 2 (Drosophila)
mm9_v1_chr11_+_83164638_83164673	0.0283959	FOX{I1,J2}.p2	
mm9_v1_chr16_+_32247284_32247386	0.0283446	FOX{I1,J2}.p2	NM_001185162|Wdr53|68980|WD repeat domain 53	NM_026898|Wdr53|68980|WD repeat domain 53	AK170771|Wdr53|68980|WD repeat domain 53	AK005105|Wdr53|68980|WD repeat domain 53
mm9_v1_chr2_+_33097791_33097802	0.0282835	FOX{I1,J2}.p2	AK187902|Angptl2|26360|angiopoietin-like 2	AK205240|Angptl2|26360|angiopoietin-like 2	AK214337|Angptl2|26360|angiopoietin-like 2
mm9_v1_chr16_+_88829238_88829254	0.0282701	FOX{I1,J2}.p2	AK132534|Krtap15|26560|keratin associated protein 15	NM_013713|Krtap15|26560|keratin associated protein 15	BC116219|Krtap15|26560|keratin associated protein 15
mm9_v1_chr3_+_95462705_95462778	0.0281039	FOX{I1,J2}.p2	BC003839|Mcl1|17210|myeloid cell leukemia sequence 1	BC021638|Mcl1|17210|myeloid cell leukemia sequence 1	BC005427|Mcl1|17210|myeloid cell leukemia sequence 1	AK159504|Mcl1|17210|myeloid cell leukemia sequence 1	U35623|Mcl1|17210|myeloid cell leukemia sequence 1	GU182318|Mcl1|17210|myeloid cell leukemia sequence 1
mm9_v1_chr1_-_170361789_170361795	0.0280805	FOX{I1,J2}.p2	AK084143|Pbx1|18514|pre B-cell leukemia transcription factor 1
mm9_v1_chr2_+_26775279_26775409	0.0280738	FOX{I1,J2}.p2	AK215042|Surf2|20931|surfeit gene 2
mm9_v1_chr12_-_27141171_27141175	0.0279974	FOX{I1,J2}.p2	AK153435|Rsad2|58185|radical S-adenosyl methionine domain containing 2
mm9_v1_chr5_-_110537170_110537204	0.0279547	FOX{I1,J2}.p2	AK159462|Gtpbp6|107999|GTP binding protein 6 (putative)
mm9_v1_chr2_-_121890678_121890752	0.0278282	FOX{I1,J2}.p2	BC019404|Spg11|214585|spastic paraplegia 11
mm9_v1_chr2_-_143688908_143688908	0.0277415	FOX{I1,J2}.p2	BC057580|Bfsp1|12075|beaded filament structural protein 1, in lens-CP94	NM_009751|Bfsp1|12075|beaded filament structural protein 1, in lens-CP94
mm9_v1_chr1_+_52901772_52901974	0.0276979	FOX{I1,J2}.p2	BC026437|Hibch|227095|3-hydroxyisobutyryl-Coenzyme A hydrolase	NM_146108|Hibch|227095|3-hydroxyisobutyryl-Coenzyme A hydrolase	AK076038|Hibch|227095|3-hydroxyisobutyryl-Coenzyme A hydrolase	AK082965|Hibch|227095|3-hydroxyisobutyryl-Coenzyme A hydrolase	AK216816|Hibch|227095|3-hydroxyisobutyryl-Coenzyme A hydrolase
mm9_v1_chr6_-_23082901_23082994	0.0275587	FOX{I1,J2}.p2	AK149400|Aass|30956|aminoadipate-semialdehyde synthase	AK098141|Aass|30956|aminoadipate-semialdehyde synthase	AK136216|Aass|30956|aminoadipate-semialdehyde synthase	BC005420|Aass|30956|aminoadipate-semialdehyde synthase	AK044323|Aass|30956|aminoadipate-semialdehyde synthase	NM_013930|Aass|30956|aminoadipate-semialdehyde synthase
mm9_v1_chr2_+_72817468_72817530	0.0271391	FOX{I1,J2}.p2	AK005870|1700011J10Rik|67686|RIKEN cDNA 1700011J10 gene	AK013593|1700011J10Rik|67686|RIKEN cDNA 1700011J10 gene
mm9_v1_chr6_-_38077491_38077509	0.0269401	FOX{I1,J2}.p2	BC059853|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene	BC042666|D630045J12Rik|330286|RIKEN cDNA D630045J12 gene
mm9_v1_chr15_-_89207467_89207531	0.0268197	FOX{I1,J2}.p2	AB060274|Tymp|72962|thymidine phosphorylase	NM_138302|Tymp|72962|thymidine phosphorylase
mm9_v1_chr4_+_59594461_59594510	0.0267945	FOX{I1,J2}.p2	AK085899|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	AK136773|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	AK011910|Hsdl2|72479|hydroxysteroid dehydrogenase like 2
mm9_v1_chr15_+_76730338_76730405	0.026671	FOX{I1,J2}.p2	AK013148|Commd5|66398|COMM domain containing 5	AK010045|Commd5|66398|COMM domain containing 5	NM_025536|Commd5|66398|COMM domain containing 5	BC025891|Commd5|66398|COMM domain containing 5
mm9_v1_chr7_-_97278443_97278523	0.0266678	FOX{I1,J2}.p2	AK019082|2310010J17Rik|78329|RIKEN cDNA 2310010J17 gene
mm9_v1_chr10_-_127617294_127617366	0.0265456	FOX{I1,J2}.p2	AK147838|Rbms2|56516|RNA binding motif, single stranded interacting protein 2	NM_001039080|Rbms2|56516|RNA binding motif, single stranded interacting protein 2
mm9_v1_chr10_-_7512590_7512629	0.0264762	FOX{I1,J2}.p2	AK045988|6530403G13Rik|76227|RIKEN cDNA 6530403G13 gene	AK018318|6530403G13Rik|76227|RIKEN cDNA 6530403G13 gene	AK084809|6530403G13Rik|76227|RIKEN cDNA 6530403G13 gene
mm9_v1_chr6_+_108765009_108765022	0.0264199	FOX{I1,J2}.p2	AK201340|Arl8b|67166|ADP-ribosylation factor-like 8B	AK206384|Arl8b|67166|ADP-ribosylation factor-like 8B	AK219184|Arl8b|67166|ADP-ribosylation factor-like 8B	AK219830|Arl8b|67166|ADP-ribosylation factor-like 8B
mm9_v1_chr11_+_19837169_19837251	0.0262232	FOX{I1,J2}.p2	
mm9_v1_chr16_+_10742336_10742473	0.0261061	FOX{I1,J2}.p2	AK028051|Clec16a|74374|C-type lectin domain family 16, member A
mm9_v1_chr16_+_17070249_17070422	0.0260939	FOX{I1,J2}.p2	AK011452|Ypel1|106369|yippee-like 1 (Drosophila)	AK076063|Ypel1|106369|yippee-like 1 (Drosophila)	AK133401|Ypel1|106369|yippee-like 1 (Drosophila)	AF190624|Ypel1|106369|yippee-like 1 (Drosophila)	BC049737|Ypel1|106369|yippee-like 1 (Drosophila)	AK139453|Ypel1|106369|yippee-like 1 (Drosophila)	AK006137|Ypel1|106369|yippee-like 1 (Drosophila)	AK006858|Ypel1|106369|yippee-like 1 (Drosophila)	AK005955|Ypel1|106369|yippee-like 1 (Drosophila)	AK006049|Ypel1|106369|yippee-like 1 (Drosophila)	AK019819|Ypel1|106369|yippee-like 1 (Drosophila)	AK014931|Ypel1|106369|yippee-like 1 (Drosophila)	NM_023249|Ypel1|106369|yippee-like 1 (Drosophila)	AK018910|Ypel1|106369|yippee-like 1 (Drosophila)	AK006505|Ypel1|106369|yippee-like 1 (Drosophila)
mm9_v1_chr17_+_24078962_24078969	0.0260821	FOX{I1,J2}.p2	BC049605|Sbp|20234|spermine binding protein	NM_011321|Sbp|20234|spermine binding protein	X06246|Sbp|20234|spermine binding protein
mm9_v1_chrX_+_39503858_39503966	0.0259303	FOX{I1,J2}.p2	AK146718|Stag2|20843|stromal antigen 2	AK168899|Stag2|20843|stromal antigen 2	NM_021465|Stag2|20843|stromal antigen 2
mm9_v1_chr1_-_133964541_133964638	0.025841	FOX{I1,J2}.p2	AK162495|Mfsd4|213006|major facilitator superfamily domain containing 4	AK048692|Mfsd4|213006|major facilitator superfamily domain containing 4	NM_001114662|Mfsd4|213006|major facilitator superfamily domain containing 4	NM_172510|Mfsd4|213006|major facilitator superfamily domain containing 4
mm9_v1_chr11_-_99091732_99091806	0.0258161	FOX{I1,J2}.p2	BC034509|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	BC061498|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	BC047141|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	AK018493|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	AK042961|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327022|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327023|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327024|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327025|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	EU327026|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1	AK076177|Smarce1|57376|SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
mm9_v1_chr7_-_127345462_127345501	0.0258135	FOX{I1,J2}.p2	BC045159|Crym|12971|crystallin, mu	AK138422|Crym|12971|crystallin, mu	AK163781|Crym|12971|crystallin, mu	AK143116|Crym|12971|crystallin, mu	AK163801|Crym|12971|crystallin, mu	AF039391|Crym|12971|crystallin, mu	NM_016669|Crym|12971|crystallin, mu
mm9_v1_chr15_-_54751515_54751700	0.0256585	FOX{I1,J2}.p2	EU131009|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	EU131010|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	NM_001136077|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	BC003264|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AF123542|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK088491|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK161144|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK163881|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	BC058759|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	AK038940|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2	NM_015744|Enpp2|18606|ectonucleotide pyrophosphatase/phosphodiesterase 2
mm9_v1_chr2_-_85681945_85681945	0.0254876	FOX{I1,J2}.p2	BC117705|Olfr1019|259017|olfactory receptor 1019	BC117706|Olfr1019|259017|olfactory receptor 1019	NM_147015|Olfr1019|259017|olfactory receptor 1019
mm9_v1_chr5_-_31522802_31522840	0.0254686	FOX{I1,J2}.p2	U42383|Ppm1g|14208|protein phosphatase 1G (formerly 2C), magnesium-dependent, gamma isoform
mm9_v1_chr1_+_134088010_134088033	0.0253822	FOX{I1,J2}.p2	AK144269|Lemd1|213409|LEM domain containing 1	NM_001033250|Lemd1|213409|LEM domain containing 1	BC115462|Lemd1|213409|LEM domain containing 1	BC115463|Lemd1|213409|LEM domain containing 1	BC066109|Lemd1|213409|LEM domain containing 1
mm9_v1_chr10_-_86168236_86168286	0.0253113	FOX{I1,J2}.p2	AK146885|Hsp90b1|22027|heat shock protein 90, beta (Grp94), member 1
mm9_v1_chr6_-_119305193_119305208	0.0252328	FOX{I1,J2}.p2	BC030936|Adipor2|68465|adiponectin receptor 2
mm9_v1_chr9_-_21572496_21572571	0.0251979	FOX{I1,J2}.p2	AK212559|Kank2|235041|KN motif and ankyrin repeat domains 2
mm9_v1_chr10_-_79209301_79209350	0.0251972	FOX{I1,J2}.p2	BC110697|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK154729|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK053356|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK154181|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK047545|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK085666|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK128956|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	BC117939|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	BC117940|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	AK030039|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)	NM_172551|Polrmt|216151|polymerase (RNA) mitochondrial (DNA directed)
mm9_v1_chr11_-_86171026_86171057	0.0251568	FOX{I1,J2}.p2	NM_001080931|Med13|327987|mediator complex subunit 13
mm9_v1_chr10_+_96079634_96079769	0.025109	FOX{I1,J2}.p2	NM_007569|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK162764|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK149547|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC018309|Btg1|12226|B-cell translocation gene 1, anti-proliferative	L16846|Btg1|12226|B-cell translocation gene 1, anti-proliferative	BC006834|Btg1|12226|B-cell translocation gene 1, anti-proliferative	AK181728|Btg1|12226|B-cell translocation gene 1, anti-proliferative
mm9_v1_chr11_-_113612629_113612637	0.024973	FOX{I1,J2}.p2	AB035088|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4
mm9_v1_chr19_-_18655597_18655704	0.0248184	FOX{I1,J2}.p2	AK205236|Ostf1|20409|osteoclast stimulating factor 1	AK207431|Ostf1|20409|osteoclast stimulating factor 1	AK209921|Ostf1|20409|osteoclast stimulating factor 1
mm9_v1_chr11_-_69480763_69480942	0.0246774	FOX{I1,J2}.p2	
mm9_v1_chr3_-_51129908_51129958	0.0246124	FOX{I1,J2}.p2	AF256216|Elf2|69257|E74-like factor 2	AF256217|Elf2|69257|E74-like factor 2	NM_023502|Elf2|69257|E74-like factor 2	BC092057|Elf2|69257|E74-like factor 2
mm9_v1_chr9_-_110019806_110019945	0.0245908	FOX{I1,J2}.p2	BC062885|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK153969|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK184646|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK159601|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30	AK146326|Dhx30|72831|DEAH (Asp-Glu-Ala-His) box polypeptide 30
mm9_v1_chr18_-_25637786_25637794	0.0245795	FOX{I1,J2}.p2	AK078071|Celf4|108013|CUGBP, Elav-like family member 4
mm9_v1_chr7_-_125849255_125849313	0.0245703	FOX{I1,J2}.p2	AK004583|Gde1|56209|glycerophosphodiester phosphodiesterase 1	AK150807|Gde1|56209|glycerophosphodiester phosphodiesterase 1
mm9_v1_chr4_-_117564594_117564651	0.0245475	FOX{I1,J2}.p2	BC031124|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK018638|Dph2|67728|DPH2 homolog (S. cerevisiae)	NM_026344|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK011199|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK051026|Dph2|67728|DPH2 homolog (S. cerevisiae)	AK080747|Dph2|67728|DPH2 homolog (S. cerevisiae)	BC014746|Dph2|67728|DPH2 homolog (S. cerevisiae)
mm9_v1_chr17_+_21587315_21587362	0.0242207	FOX{I1,J2}.p2	NM_009558|Zfp51|22709|zinc finger protein 51	X74855|Zfp51|22709|zinc finger protein 51	AK154157|Zfp51|22709|zinc finger protein 51	AK133677|Zfp51|22709|zinc finger protein 51	BC011183|Zfp51|22709|zinc finger protein 51
mm9_v1_chr1_-_107253012_107253082	0.0242141	FOX{I1,J2}.p2	AK035832|Rnf152|320311|ring finger protein 152
mm9_v1_chr9_+_121643763_121643808	0.0241156	FOX{I1,J2}.p2	AK052484|Nktr|18087|natural killer tumor recognition sequence
mm9_v1_chr2_+_25203630_25203665	0.0240964	FOX{I1,J2}.p2	BC025500|Man1b1|227619|mannosidase, alpha, class 1B, member 1
mm9_v1_chr3_-_37024751_37024880	0.024045	FOX{I1,J2}.p2	U41504|Il2|16183|interleukin 2	DQ836354|Il2|16183|interleukin 2	U41494|Il2|16183|interleukin 2	U41505|Il2|16183|interleukin 2	U41506|Il2|16183|interleukin 2	AY147902|Il2|16183|interleukin 2	X66058|Il2|16183|interleukin 2	AF065914|Il2|16183|interleukin 2	AF065915|Il2|16183|interleukin 2	AF065916|Il2|16183|interleukin 2	BC116845|Il2|16183|interleukin 2	BC116873|Il2|16183|interleukin 2	X01772|Il2|16183|interleukin 2	X73040|Il2|16183|interleukin 2	K02292|Il2|16183|interleukin 2	NM_008366|Il2|16183|interleukin 2	AF538059|Il2|16183|interleukin 2	AF542383|Il2|16183|interleukin 2	AF542384|Il2|16183|interleukin 2	AF542385|Il2|16183|interleukin 2
mm9_v1_chr8_+_74446723_74446817	0.0240247	FOX{I1,J2}.p2	NM_133358|Zfp617|170938|zinc finger protein 617	AK143880|Zfp617|170938|zinc finger protein 617	AB020542|Zfp617|170938|zinc finger protein 617	AK146644|Zfp617|170938|zinc finger protein 617	BC014712|Zfp617|170938|zinc finger protein 617
mm9_v1_chr13_-_13325178_13325235	0.0239864	FOX{I1,J2}.p2	AK184566|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide	AK187011|Ywhaq|22630|tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide
mm9_v1_chr16_-_34263047_34263052	0.0238583	FOX{I1,J2}.p2	AK159031|Kalrn|545156|kalirin, RhoGEF kinase
mm9_v1_chr11_+_46254601_46254700	0.0236831	FOX{I1,J2}.p2	AK210054|Med7|66213|mediator complex subunit 7
mm9_v1_chrX_-_71618617_71618655	0.0235325	FOX{I1,J2}.p2	BC023050|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3	AK041958|Slc10a3|214601|solute carrier family 10 (sodium/bile acid cotransporter family), member 3
mm9_v1_chr6_-_82889660_82889681	0.0234941	FOX{I1,J2}.p2	AK158292|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain	BC139232|Sema4f|20355|sema domain, immunoglobulin domain (Ig), TM domain, and short cytoplasmic domain
mm9_v1_chr7_+_87391261_87391440	0.0234742	FOX{I1,J2}.p2	AK029565|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	NM_177765|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	AK007167|Ttll13|269954|tubulin tyrosine ligase-like family, member 13	AK161519|Ttll13|269954|tubulin tyrosine ligase-like family, member 13
mm9_v1_chr11_+_98629709_98629729	0.0233404	FOX{I1,J2}.p2	
mm9_v1_chr12_+_73862177_73862301	0.0233271	FOX{I1,J2}.p2	NM_008910|Ppm1a|19042|protein phosphatase 1A, magnesium dependent, alpha isoform	AK076054|Ppm1a|19042|protein phosphatase 1A, magnesium dependent, alpha isoform
mm9_v1_chr2_+_119420031_119420077	0.0230919	FOX{I1,J2}.p2	AK017100|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK147270|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK009929|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK006166|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK011848|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK170765|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK029148|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	BC026913|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK011393|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK017322|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene	AK030275|1700020I14Rik|66602|RIKEN cDNA 1700020I14 gene
mm9_v1_chr8_+_74135114_74135308	0.0230896	FOX{I1,J2}.p2	BC018287|Glt25d1|234407|glycosyltransferase 25 domain containing 1
mm9_v1_chr13_-_67552515_67552559	0.0230839	FOX{I1,J2}.p2	BC080824|Zfp874a|238692|zinc finger protein 874a	AK136394|Zfp874a|238692|zinc finger protein 874a	AK049183|Zfp874a|238692|zinc finger protein 874a	AK145787|Zfp874a|238692|zinc finger protein 874a	NM_177712|Zfp874a|238692|zinc finger protein 874a
mm9_v1_chr4_+_94406002_94406012	0.0230355	FOX{I1,J2}.p2	AK053336|Tek|21687|endothelial-specific receptor tyrosine kinase
mm9_v1_chr8_-_35153699_35153753	0.0229144	FOX{I1,J2}.p2	
mm9_v1_chr11_+_94426358_94426387	0.0229103	FOX{I1,J2}.p2	AK158297|Chad|12643|chondroadherin	NM_007689|Chad|12643|chondroadherin
mm9_v1_chrX_-_73119905_73119926	0.022784	FOX{I1,J2}.p2	NM_145629|Pls3|102866|plastin 3 (T-isoform)
mm9_v1_chr4_-_33335457_33335484	0.0226617	FOX{I1,J2}.p2	AK159693|Pnrc1|108767|proline-rich nuclear receptor coactivator 1	AK087995|Pnrc1|108767|proline-rich nuclear receptor coactivator 1	AK160284|Pnrc1|108767|proline-rich nuclear receptor coactivator 1
mm9_v1_chr6_-_122692754_122692762	0.0225564	FOX{I1,J2}.p2	AK140176|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3	NM_011401|Slc2a3|20527|solute carrier family 2 (facilitated glucose transporter), member 3
mm9_v1_chr11_-_86517662_86517713	0.0224945	FOX{I1,J2}.p2	AK167527|Cltc|67300|clathrin, heavy polypeptide (Hc)
mm9_v1_chr5_+_32761471_32761527	0.0223379	FOX{I1,J2}.p2	AK171283|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform	AK089067|Ppp1cb|19046|protein phosphatase 1, catalytic subunit, beta isoform
mm9_v1_chr8_-_27104573_27104612	0.0222477	FOX{I1,J2}.p2	BC027296|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK015374|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK032677|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK043620|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK170994|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	NM_029037|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK160873|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK036348|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene	AK138952|4930444A02Rik|74653|RIKEN cDNA 4930444A02 gene
mm9_v1_chr6_-_23600205_23600304	0.022205	FOX{I1,J2}.p2	BC116423|Rnf133|386611|ring finger protein 133	BC116424|Rnf133|386611|ring finger protein 133	AK028082|Rnf133|386611|ring finger protein 133	NM_198251|Rnf133|386611|ring finger protein 133
mm9_v1_chr13_-_30632975_30633024	0.0220964	FOX{I1,J2}.p2	AK197173|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK210928|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK191429|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK212564|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK216624|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1	AK217705|Uqcrfs1|66694|ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1
mm9_v1_chr10_-_80129720_80129733	0.0220029	FOX{I1,J2}.p2	BC013844|Mknk2|17347|MAP kinase-interacting serine/threonine kinase 2
mm9_v1_chr9_-_57531425_57531441	0.0219345	FOX{I1,J2}.p2	X04283|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2	BC018298|Cyp1a2|13077|cytochrome P450, family 1, subfamily a, polypeptide 2
mm9_v1_chr4_+_58298833_58298983	0.0219149	FOX{I1,J2}.p2	NM_001037127|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001037128|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001037129|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001037130|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_001165996|Musk|18198|muscle, skeletal, receptor tyrosine kinase	NM_010944|Musk|18198|muscle, skeletal, receptor tyrosine kinase	U37708|Musk|18198|muscle, skeletal, receptor tyrosine kinase	U37709|Musk|18198|muscle, skeletal, receptor tyrosine kinase	BC100342|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY360453|Musk|18198|muscle, skeletal, receptor tyrosine kinase	X86444|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY955296|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY955297|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY955298|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY956403|Musk|18198|muscle, skeletal, receptor tyrosine kinase	AY956404|Musk|18198|muscle, skeletal, receptor tyrosine kinase
mm9_v1_chr16_-_35313780_35313815	0.0217732	FOX{I1,J2}.p2	AK085223|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)	AK164647|Sec22a|317717|SEC22 vesicle trafficking protein homologe A (S. cerevisiae)
mm9_v1_chr2_+_148515898_148515954	0.0217327	FOX{I1,J2}.p2	AK208985|Gzf1|74533|GDNF-inducible zinc finger protein 1
mm9_v1_chr8_+_126547293_126547372	0.0217227	FOX{I1,J2}.p2	BC151125|Urb2|382038|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)	NM_001029876|Urb2|382038|URB2 ribosome biogenesis 2 homolog (S. cerevisiae)
mm9_v1_chr9_+_64027101_64027115	0.0216953	FOX{I1,J2}.p2	NM_183316|Snapc5|330959|small nuclear RNA activating complex, polypeptide 5	BC028529|Snapc5|330959|small nuclear RNA activating complex, polypeptide 5
mm9_v1_chr13_-_29947456_29947544	0.0216733	FOX{I1,J2}.p2	BC016073|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	NM_144536|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK158546|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK041864|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK018346|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK169761|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK082629|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1	AK045506|Cdkal1|68916|CDK5 regulatory subunit associated protein 1-like 1
mm9_v1_chr5_-_135825744_135825913	0.0215624	FOX{I1,J2}.p2	AY029192|Fkbp6|94244|FK506 binding protein 6	AF367710|Fkbp6|94244|FK506 binding protein 6	AF367711|Fkbp6|94244|FK506 binding protein 6	NM_033571|Fkbp6|94244|FK506 binding protein 6	AF367709|Fkbp6|94244|FK506 binding protein 6	AK090036|Fkbp6|94244|FK506 binding protein 6	BC139092|Fkbp6|94244|FK506 binding protein 6	BC139097|Fkbp6|94244|FK506 binding protein 6
mm9_v1_chr8_+_36740640_36740782	0.0214797	FOX{I1,J2}.p2	AK010068|Mfhas1|52065|malignant fibrous histiocytoma amplified sequence 1
mm9_v1_chr16_+_59302980_59302980	0.0213239	FOX{I1,J2}.p2	BC128025|Olfr203|258479|olfactory receptor 203	NM_146486|Olfr203|258479|olfactory receptor 203
mm9_v1_chr18_+_74375861_74375888	0.021109	FOX{I1,J2}.p2	AK083655|Cxxc1|74322|CXXC finger 1 (PHD domain)	NM_028868|Cxxc1|74322|CXXC finger 1 (PHD domain)	AK010337|Cxxc1|74322|CXXC finger 1 (PHD domain)	AY099096|Cxxc1|74322|CXXC finger 1 (PHD domain)
mm9_v1_chr4_+_125701902_125702025	0.0210779	FOX{I1,J2}.p2	AK144318|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	NM_007782|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	AK089305|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	M58288|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	BC115865|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)	BC116635|Csf3r|12986|colony stimulating factor 3 receptor (granulocyte)
mm9_v1_chr19_-_16342088_16342126	0.0208973	FOX{I1,J2}.p2	
mm9_v1_chr15_-_98701613_98701613	0.0207837	FOX{I1,J2}.p2	NM_001033276|Mll2|381022|myeloid/lymphoid or mixed-lineage leukemia 2
mm9_v1_chr10_-_122513438_122513438	0.0207458	FOX{I1,J2}.p2	AK161217|Mon2|67074|MON2 homolog (yeast)
mm9_v1_chr6_-_113327369_113327436	0.0207439	FOX{I1,J2}.p2	BC032195|Tada3|101206|transcriptional adaptor 3	AK187590|Tada3|101206|transcriptional adaptor 3
mm9_v1_chr5_-_149363829_149363890	0.0207303	FOX{I1,J2}.p2	AK198634|Ubl3|24109|ubiquitin-like 3
mm9_v1_chr2_-_105229165_105229175	0.0206559	FOX{I1,J2}.p2	AK179954|Rcn1|19672|reticulocalbin 1
mm9_v1_chr2_+_152987262_152987297	0.0205584	FOX{I1,J2}.p2	AK162435|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK048158|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK171487|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	BC110309|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK088012|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK047497|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AK087048|Tm9sf4|99237|transmembrane 9 superfamily protein member 4	AB093220|Tm9sf4|99237|transmembrane 9 superfamily protein member 4
mm9_v1_chr7_+_53289198_53289316	0.0204156	FOX{I1,J2}.p2	AK080754|Nomo1|211548|nodal modulator 1	AK082963|Nomo1|211548|nodal modulator 1	AK165643|Nomo1|211548|nodal modulator 1
mm9_v1_chr15_-_72929166_72929248	0.020362	FOX{I1,J2}.p2	AK148725|2310051F07Rik|108745|RIKEN cDNA 2310051F07 gene
mm9_v1_chr6_-_115573479_115573509	0.0202458	FOX{I1,J2}.p2	AK190457|Raf1|110157|v-raf-leukemia viral oncogene 1
mm9_v1_chr1_+_5578546_5578692	0.0201087	FOX{I1,J2}.p2	AK039151|Oprk1|18387|opioid receptor, kappa 1	L11065|Oprk1|18387|opioid receptor, kappa 1	NM_011011|Oprk1|18387|opioid receptor, kappa 1	BC116795|Oprk1|18387|opioid receptor, kappa 1	BC119026|Oprk1|18387|opioid receptor, kappa 1	BC144731|Oprk1|18387|opioid receptor, kappa 1	S81111|Oprk1|18387|opioid receptor, kappa 1
mm9_v1_chr6_-_72386442_72386506	0.0200089	FOX{I1,J2}.p2	AK193673|Mat2a|232087|methionine adenosyltransferase II, alpha	AK207616|Mat2a|232087|methionine adenosyltransferase II, alpha
mm9_v1_chr19_-_13890077_13890147	0.019948	FOX{I1,J2}.p2	NM_146796|Olfr1499|258792|olfactory receptor 1499	BC132138|Olfr1499|258792|olfactory receptor 1499
mm9_v1_chr18_-_62901040_62901040	0.0198391	FOX{I1,J2}.p2	AK139149|Spink13|100038417|serine peptidase inhibitor, Kazal type 13	NM_001168423|Spink13|100038417|serine peptidase inhibitor, Kazal type 13
mm9_v1_chr8_-_74116341_74116362	0.0198267	FOX{I1,J2}.p2	AK080749|Pgls|66171|6-phosphogluconolactonase
mm9_v1_chr6_-_118361541_118361556	0.019616	FOX{I1,J2}.p2	BC030906|Bms1|213895|BMS1 homolog, ribosome assembly protein (yeast)
mm9_v1_chr10_-_70386552_70386556	0.0194268	FOX{I1,J2}.p2	AK082289|Bicc1|83675|bicaudal C homolog 1 (Drosophila)
mm9_v1_chr7_+_27904997_27905027	0.0194187	FOX{I1,J2}.p2	BC011089|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2	BC024742|Cyp2f2|13107|cytochrome P450, family 2, subfamily f, polypeptide 2
mm9_v1_chr17_+_34341417_34341460	0.0191181	FOX{I1,J2}.p2	NM_011530|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)	AK159200|Tap2|21355|transporter 2, ATP-binding cassette, sub-family B (MDR/TAP)
mm9_v1_chr17_-_36157472_36157645	0.0190735	FOX{I1,J2}.p2	NM_008207|H2-T24|15042|histocompatibility 2, T region locus 24
mm9_v1_chr3_+_87973934_87974022	0.018975	FOX{I1,J2}.p2	AK032042|Mef2d|17261|myocyte enhancer factor 2D
mm9_v1_chr17_+_26389892_26389910	0.0189594	FOX{I1,J2}.p2	AK017655|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK007781|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like	AK010539|Luc7l|66978|Luc7 homolog (S. cerevisiae)-like
mm9_v1_chr1_-_172145521_172145534	0.0188711	FOX{I1,J2}.p2	BC058732|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	NM_010633|Uhmk1|16589|U2AF homology motif (UHM) kinase 1	AK013347|Uhmk1|16589|U2AF homology motif (UHM) kinase 1
mm9_v1_chr15_+_81575277_81575277	0.0184863	FOX{I1,J2}.p2	NM_001081016|Zc3h7b|20286|zinc finger CCCH type containing 7B
mm9_v1_chr2_-_34817068_34817291	0.0183466	FOX{I1,J2}.p2	AK169515|Traf1|22029|TNF receptor-associated factor 1	AK089281|Traf1|22029|TNF receptor-associated factor 1	L35302|Traf1|22029|TNF receptor-associated factor 1	AK142931|Traf1|22029|TNF receptor-associated factor 1	AK029135|Traf1|22029|TNF receptor-associated factor 1	NM_009421|Traf1|22029|TNF receptor-associated factor 1
mm9_v1_chr1_-_128727208_128727208	0.018311	FOX{I1,J2}.p2	NM_001081756|Nckap5|210356|NCK-associated protein 5	NM_176957|Nckap5|210356|NCK-associated protein 5
mm9_v1_chr17_+_56752805_56752873	0.0182684	FOX{I1,J2}.p2	NM_018730|Rpl36|54217|ribosomal protein L36	AK003115|Rpl36|54217|ribosomal protein L36	BC086914|Rpl36|54217|ribosomal protein L36	BC021595|Rpl36|54217|ribosomal protein L36	X75895|Rpl36|54217|ribosomal protein L36
mm9_v1_chr9_+_108472210_108472254	0.0182502	FOX{I1,J2}.p2	AK149963|Dalrd3|67789|DALR anticodon binding domain containing 3	NM_026378|Dalrd3|67789|DALR anticodon binding domain containing 3	AK002439|Dalrd3|67789|DALR anticodon binding domain containing 3	AK171818|Dalrd3|67789|DALR anticodon binding domain containing 3	AK169405|Dalrd3|67789|DALR anticodon binding domain containing 3	BC013483|Dalrd3|67789|DALR anticodon binding domain containing 3
mm9_v1_chr4_+_106260649_106260683	0.0182317	FOX{I1,J2}.p2	AK010192|Dhcr24|74754|24-dehydrocholesterol reductase
mm9_v1_chr10_-_55948481_55948530	0.0181443	FOX{I1,J2}.p2	NM_001033385|D630037F22Rik|544696|RIKEN cDNA D630037F22 gene
mm9_v1_chr8_-_124999921_124999977	0.0177794	FOX{I1,J2}.p2	AK079883|Rnf166|68718|ring finger protein 166	BC131924|Rnf166|68718|ring finger protein 166	BC132281|Rnf166|68718|ring finger protein 166	AK151813|Rnf166|68718|ring finger protein 166	NM_001033142|Rnf166|68718|ring finger protein 166
mm9_v1_chr3_+_66789621_66789657	0.0176332	FOX{I1,J2}.p2	AK168539|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC038303|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK004742|Rsrc1|66880|arginine/serine-rich coiled-coil 1	AK169340|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC027501|Rsrc1|66880|arginine/serine-rich coiled-coil 1	BC083123|Rsrc1|66880|arginine/serine-rich coiled-coil 1
mm9_v1_chr2_-_148700920_148700989	0.0174715	FOX{I1,J2}.p2	AK212642|Cst3|13010|cystatin C
mm9_v1_chr1_+_90303576_90303673	0.0170418	FOX{I1,J2}.p2	AK002814|Spp2|75396|secreted phosphoprotein 2	NM_029269|Spp2|75396|secreted phosphoprotein 2	AJ315513|Spp2|75396|secreted phosphoprotein 2	BC027494|Spp2|75396|secreted phosphoprotein 2
mm9_v1_chr16_-_91647216_91647232	0.0170192	FOX{I1,J2}.p2	NM_010256|Gart|14450|phosphoribosylglycinamide formyltransferase
mm9_v1_chr4_-_106979732_106979773	0.017008	FOX{I1,J2}.p2	AK002549|Dio1|13370|deiodinase, iodothyronine, type I	BC089608|Dio1|13370|deiodinase, iodothyronine, type I	NM_007860|Dio1|13370|deiodinase, iodothyronine, type I	U49861|Dio1|13370|deiodinase, iodothyronine, type I	BC019786|Dio1|13370|deiodinase, iodothyronine, type I	BC037080|Dio1|13370|deiodinase, iodothyronine, type I
mm9_v1_chr4_-_49857641_49857765	0.0168854	FOX{I1,J2}.p2	AK173314|Grin3a|242443|glutamate receptor ionotropic, NMDA3A
mm9_v1_chr4_+_125724224_125724314	0.016822	FOX{I1,J2}.p2	AK140877|Mrps15|66407|mitochondrial ribosomal protein S15	BC029193|Mrps15|66407|mitochondrial ribosomal protein S15	BC055861|Mrps15|66407|mitochondrial ribosomal protein S15	AB049947|Mrps15|66407|mitochondrial ribosomal protein S15
mm9_v1_chr4_+_59594569_59594621	0.0167587	FOX{I1,J2}.p2	AK145230|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	AY725196|Hsdl2|72479|hydroxysteroid dehydrogenase like 2
mm9_v1_chr8_+_125927553_125927654	0.0167158	FOX{I1,J2}.p2	AK212341|Tcf25|66855|transcription factor 25 (basic helix-loop-helix)
mm9_v1_chr6_+_48995303_48995460	0.0166994	FOX{I1,J2}.p2	AK179971|Gpnmb|93695|glycoprotein (transmembrane) nmb
mm9_v1_chr4_-_96330818_96330832	0.0166379	FOX{I1,J2}.p2	AK165404|Cyp2j5|13109|cytochrome P450, family 2, subfamily j, polypeptide 5
mm9_v1_chr13_-_4522566_4522580	0.0165576	FOX{I1,J2}.p2	AB097220|Akr1c20|116852|aldo-keto reductase family 1, member C20	BC021607|Akr1c20|116852|aldo-keto reductase family 1, member C20	AK012162|Akr1c20|116852|aldo-keto reductase family 1, member C20	NM_054080|Akr1c20|116852|aldo-keto reductase family 1, member C20
mm9_v1_chr17_-_32421603_32421681	0.0165124	FOX{I1,J2}.p2	BC103773|Brd4|57261|bromodomain containing 4	AK042431|Brd4|57261|bromodomain containing 4	BC013666|Brd4|57261|bromodomain containing 4	AK154514|Brd4|57261|bromodomain containing 4
mm9_v1_chr18_-_61371010_61371141	0.0163603	FOX{I1,J2}.p2	AK007212|Slc26a2|13521|solute carrier family 26 (sulfate transporter), member 2	BC028345|Slc26a2|13521|solute carrier family 26 (sulfate transporter), member 2	D42049|Slc26a2|13521|solute carrier family 26 (sulfate transporter), member 2	AK163974|Slc26a2|13521|solute carrier family 26 (sulfate transporter), member 2
mm9_v1_chr5_+_101227737_101227799	0.0162953	FOX{I1,J2}.p2	AK145935|Mrps18c|68735|mitochondrial ribosomal protein S18C	AK004139|Mrps18c|68735|mitochondrial ribosomal protein S18C	AK088290|Mrps18c|68735|mitochondrial ribosomal protein S18C	BC028442|Mrps18c|68735|mitochondrial ribosomal protein S18C	NM_026826|Mrps18c|68735|mitochondrial ribosomal protein S18C
mm9_v1_chr15_+_57972893_57972996	0.0162336	FOX{I1,J2}.p2	AK150578|Wdyhv1|76773|WDYHV motif containing 1	AK010831|Wdyhv1|76773|WDYHV motif containing 1	AK167510|Wdyhv1|76773|WDYHV motif containing 1	BC051524|Wdyhv1|76773|WDYHV motif containing 1	NM_029734|Wdyhv1|76773|WDYHV motif containing 1
mm9_v1_chr1_+_37486981_37487095	0.016217	FOX{I1,J2}.p2	AK132757|Unc50|67387|unc-50 homolog (C. elegans)	NM_026123|Unc50|67387|unc-50 homolog (C. elegans)	AK135885|Unc50|67387|unc-50 homolog (C. elegans)	AK003273|Unc50|67387|unc-50 homolog (C. elegans)	AY017214|Unc50|67387|unc-50 homolog (C. elegans)	AK004433|Unc50|67387|unc-50 homolog (C. elegans)	BC019484|Unc50|67387|unc-50 homolog (C. elegans)
mm9_v1_chr2_-_120803594_120803609	0.0161829	FOX{I1,J2}.p2	
mm9_v1_chr8_+_113381876_113381915	0.0161829	FOX{I1,J2}.p2	AK193863|Cog4|102339|component of oligomeric golgi complex 4
mm9_v1_chr19_+_3323262_3323319	0.0161103	FOX{I1,J2}.p2	NM_013495|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver	BC054791|Cpt1a|12894|carnitine palmitoyltransferase 1a, liver
mm9_v1_chr2_+_4897196_4897196	0.0160887	FOX{I1,J2}.p2	EF529510|Ucma|68527|upper zone of growth plate and cartilage matrix associated
mm9_v1_chr18_+_65210574_65210693	0.0159448	FOX{I1,J2}.p2	BC082281|Nedd4l|83814|neural precursor cell expressed, developmentally down-regulated gene 4-like
mm9_v1_chr7_-_133929571_133929602	0.0159354	FOX{I1,J2}.p2	AK211564|Ppp4c|56420|protein phosphatase 4, catalytic subunit
mm9_v1_chr3_+_136333251_136333262	0.0157696	FOX{I1,J2}.p2	AK166287|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr9_-_14587400_14587407	0.0157034	FOX{I1,J2}.p2	BC020398|Ankrd49|56503|ankyrin repeat domain 49	BC019777|Ankrd49|56503|ankyrin repeat domain 49	NM_019683|Ankrd49|56503|ankyrin repeat domain 49
mm9_v1_chr17_-_45611774_45611886	0.0156268	FOX{I1,J2}.p2	AY336501|Spats1|71020|spermatogenesis associated, serine-rich 1	AK016586|Spats1|71020|spermatogenesis associated, serine-rich 1	AK165435|Spats1|71020|spermatogenesis associated, serine-rich 1	BC131909|Spats1|71020|spermatogenesis associated, serine-rich 1	AK005865|Spats1|71020|spermatogenesis associated, serine-rich 1	NM_027649|Spats1|71020|spermatogenesis associated, serine-rich 1
mm9_v1_chr3_+_94641479_94641499	0.0156249	FOX{I1,J2}.p2	NM_001165948|Pogz|229584|pogo transposable element with ZNF domain	NM_172683|Pogz|229584|pogo transposable element with ZNF domain	BC065134|Pogz|229584|pogo transposable element with ZNF domain	BC066108|Pogz|229584|pogo transposable element with ZNF domain
mm9_v1_chr7_-_132635008_132635055	0.0156003	FOX{I1,J2}.p2	BC031848|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	BC049558|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)	NM_026330|Nsmce1|67711|non-SMC element 1 homolog (S. cerevisiae)
mm9_v1_chr1_-_58558259_58558259	0.0155707	FOX{I1,J2}.p2	AB190256|Orc2|18393|origin recognition complex, subunit 2	NM_001025378|Orc2|18393|origin recognition complex, subunit 2
mm9_v1_chr1_+_169287454_169287527	0.0155005	FOX{I1,J2}.p2	AK179746|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AK180861|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AK184027|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AK188805|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AK199575|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AK203750|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1	AK211951|Aldh9a1|56752|aldehyde dehydrogenase 9, subfamily A1
mm9_v1_chr2_+_129626252_129626487	0.0154763	FOX{I1,J2}.p2	NM_001038635|Stk35|67333|serine/threonine kinase 35	NM_183262|Stk35|67333|serine/threonine kinase 35	BC138904|Stk35|67333|serine/threonine kinase 35	BC138905|Stk35|67333|serine/threonine kinase 35	AK165988|Stk35|67333|serine/threonine kinase 35	AK006778|Stk35|67333|serine/threonine kinase 35
mm9_v1_chr15_-_5058532_5058532	0.0154013	FOX{I1,J2}.p2	NM_001163138|Card6|239319|caspase recruitment domain family, member 6
mm9_v1_chr13_+_13529868_13529883	0.0153871	FOX{I1,J2}.p2	NM_010917|Nid1|18073|nidogen 1	BC052939|Nid1|18073|nidogen 1
mm9_v1_chr8_+_96561162_96561175	0.0152123	FOX{I1,J2}.p2	AK166343|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr11_+_108811065_108811123	0.0150476	FOX{I1,J2}.p2	
mm9_v1_chr13_-_41582649_41582707	0.0150341	FOX{I1,J2}.p2	BC053713|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK083374|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AK030985|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	AF009366|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9	NM_001111324|Nedd9|18003|neural precursor cell expressed, developmentally down-regulated gene 9
mm9_v1_chr2_-_105228042_105228114	0.0149532	FOX{I1,J2}.p2	AK213156|Rcn1|19672|reticulocalbin 1
mm9_v1_chr13_+_33057312_33057381	0.0147438	FOX{I1,J2}.p2	AK078753|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	AK154048|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	AK171741|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	AK084785|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	BC061050|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	NM_011454|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b	U96707|Serpinb6b|20708|serine (or cysteine) peptidase inhibitor, clade B, member 6b
mm9_v1_chr15_-_32174404_32174416	0.0146321	FOX{I1,J2}.p2	AK002304|Snord123|66835|small nucleolar RNA, C/D box 123
mm9_v1_chr18_-_46440360_46440503	0.0146174	FOX{I1,J2}.p2	AK028188|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit	AK170240|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit	BC141021|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit	AK081731|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit	NM_172627|Pggt1b|225467|protein geranylgeranyltransferase type I, beta subunit
mm9_v1_chr14_+_35148567_35148593	0.0146079	FOX{I1,J2}.p2	AK213533|Glud1|14661|glutamate dehydrogenase 1
mm9_v1_chr14_-_21871345_21871395	0.0145709	FOX{I1,J2}.p2	BC024595|Ap3m1|55946|adaptor-related protein complex 3, mu 1 subunit
mm9_v1_chr9_+_108241599_108241672	0.0144912	FOX{I1,J2}.p2	AK150548|Gpx1|14775|glutathione peroxidase 1	AK002245|Gpx1|14775|glutathione peroxidase 1	AK010999|Gpx1|14775|glutathione peroxidase 1	AK011019|Gpx1|14775|glutathione peroxidase 1	AK028171|Gpx1|14775|glutathione peroxidase 1	AK154833|Gpx1|14775|glutathione peroxidase 1	AK160388|Gpx1|14775|glutathione peroxidase 1	NM_008160|Gpx1|14775|glutathione peroxidase 1	BC086649|Gpx1|14775|glutathione peroxidase 1
mm9_v1_chr18_-_43532846_43532925	0.0144683	FOX{I1,J2}.p2	AK161509|Dpysl3|22240|dihydropyrimidinase-like 3	AK077000|Dpysl3|22240|dihydropyrimidinase-like 3	AK133040|Dpysl3|22240|dihydropyrimidinase-like 3	NM_001136086|Dpysl3|22240|dihydropyrimidinase-like 3
mm9_v1_chr2_+_172198490_172198574	0.0144682	FOX{I1,J2}.p2	AK177487|Cstf1|67337|cleavage stimulation factor, 3' pre-RNA, subunit 1
mm9_v1_chr6_-_41264706_41264793	0.0144522	FOX{I1,J2}.p2	AK007843|Try5|103964|trypsin 5	AK131898|Try5|103964|trypsin 5	AK160484|Try5|103964|trypsin 5	AB009661|Try5|103964|trypsin 5	NM_001003405|Try5|103964|trypsin 5	BC139220|Try5|103964|trypsin 5	BC139223|Try5|103964|trypsin 5
mm9_v1_chr5_+_33760994_33761117	0.0142422	FOX{I1,J2}.p2	AK084585|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene	AK163728|4933407H18Rik|71101|RIKEN cDNA 4933407H18 gene
mm9_v1_chr8_-_26059258_26059275	0.0140545	FOX{I1,J2}.p2	AF513715|Adam32|353188|a disintegrin and metallopeptidase domain 32	AK005759|Adam32|353188|a disintegrin and metallopeptidase domain 32	BC060983|Adam32|353188|a disintegrin and metallopeptidase domain 32	AK131749|Adam32|353188|a disintegrin and metallopeptidase domain 32	NM_153397|Adam32|353188|a disintegrin and metallopeptidase domain 32
mm9_v1_chrX_+_50373295_50373321	0.0140514	FOX{I1,J2}.p2	AY423851|Hprt|15452|hypoxanthine guanine phosphoribosyl transferase
mm9_v1_chr9_+_107948285_107948372	0.0139919	FOX{I1,J2}.p2	AK208685|Ip6k1|27399|inositol hexaphosphate kinase 1	AK211834|Ip6k1|27399|inositol hexaphosphate kinase 1	AK191619|Ip6k1|27399|inositol hexaphosphate kinase 1	AK215657|Ip6k1|27399|inositol hexaphosphate kinase 1
mm9_v1_chrX_+_72627673_72627773	0.0136138	FOX{I1,J2}.p2	NM_026126|Fundc2|67391|FUN14 domain containing 2	AK013460|Fundc2|67391|FUN14 domain containing 2	AK014705|Fundc2|67391|FUN14 domain containing 2	AK031214|Fundc2|67391|FUN14 domain containing 2	BC049566|Fundc2|67391|FUN14 domain containing 2	BC061464|Fundc2|67391|FUN14 domain containing 2	AY234858|Fundc2|67391|FUN14 domain containing 2
mm9_v1_chr8_+_47825072_47825091	0.0135348	FOX{I1,J2}.p2	AK132099|Irf2|16363|interferon regulatory factor 2
mm9_v1_chr1_+_40082201_40082235	0.0134323	FOX{I1,J2}.p2	AK020498|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4	AK167747|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4	AK004047|Map4k4|26921|mitogen-activated protein kinase kinase kinase kinase 4
mm9_v1_chr13_-_60278859_60278952	0.0133368	FOX{I1,J2}.p2	NM_008086|Gas1|14451|growth arrest specific 1
mm9_v1_chr2_+_125860507_125860527	0.013333	FOX{I1,J2}.p2	AK086639|Fgf7|14178|fibroblast growth factor 7	BC052847|Fgf7|14178|fibroblast growth factor 7
mm9_v1_chr8_-_87417600_87417689	0.0132732	FOX{I1,J2}.p2	U18992|Gcdh|270076|glutaryl-Coenzyme A dehydrogenase	AK165406|Gcdh|270076|glutaryl-Coenzyme A dehydrogenase	BC061158|Gcdh|270076|glutaryl-Coenzyme A dehydrogenase
mm9_v1_chr2_+_129627196_129627289	0.0132506	FOX{I1,J2}.p2	BC047277|Stk35|67333|serine/threonine kinase 35
mm9_v1_chr6_+_83065466_83065564	0.0130352	FOX{I1,J2}.p2	AK144946|Mogs|57377|mannosyl-oligosaccharide glucosidase	BC051949|Mogs|57377|mannosyl-oligosaccharide glucosidase	NM_020619|Mogs|57377|mannosyl-oligosaccharide glucosidase	AK157286|Mogs|57377|mannosyl-oligosaccharide glucosidase
mm9_v1_chr4_+_125724217_125724220	0.0130107	FOX{I1,J2}.p2	AK005131|Mrps15|66407|mitochondrial ribosomal protein S15	AK008623|Mrps15|66407|mitochondrial ribosomal protein S15
mm9_v1_chr14_-_58535467_58535641	0.0129879	FOX{I1,J2}.p2	AK215594|Efha1|68514|EF hand domain family A1	AK219744|Efha1|68514|EF hand domain family A1	AK218511|Efha1|68514|EF hand domain family A1	AK180563|Efha1|68514|EF hand domain family A1	AK208098|Efha1|68514|EF hand domain family A1	AK218370|Efha1|68514|EF hand domain family A1	AK218406|Efha1|68514|EF hand domain family A1	AK218526|Efha1|68514|EF hand domain family A1
mm9_v1_chr7_+_18398030_18398100	0.0129573	FOX{I1,J2}.p2	AK005390|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005482|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005509|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	AK005533|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	NM_025957|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14	BC099412|Ceacam14|67084|carcinoembryonic antigen-related cell adhesion molecule 14
mm9_v1_chr17_+_23949101_23949124	0.0129298	FOX{I1,J2}.p2	AK081577|Srrm2|75956|serine/arginine repetitive matrix 2
mm9_v1_chr5_-_69983484_69983543	0.0129061	FOX{I1,J2}.p2	AK220275|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK171299|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK166601|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	BC004084|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	NM_001038015|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK014950|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK015527|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK017588|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK051596|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK141408|Gnpda2|67980|glucosamine-6-phosphate deaminase 2	AK168516|Gnpda2|67980|glucosamine-6-phosphate deaminase 2
mm9_v1_chr2_-_148263617_148263709	0.012794	FOX{I1,J2}.p2	AK161779|Cd93|17064|CD93 antigen	AK150385|Cd93|17064|CD93 antigen
mm9_v1_chr10_+_41607235_41607307	0.0127509	FOX{I1,J2}.p2	NM_001013370|Sesn1|140742|sestrin 1	BC055753|Sesn1|140742|sestrin 1	AK160083|Sesn1|140742|sestrin 1	AK159531|Sesn1|140742|sestrin 1
mm9_v1_chr3_-_32490071_32490129	0.0127305	FOX{I1,J2}.p2	AK195471|Gnb4|14696|guanine nucleotide binding protein (G protein), beta 4	AK211063|Gnb4|14696|guanine nucleotide binding protein (G protein), beta 4
mm9_v1_chr1_-_95698465_95698512	0.0126616	FOX{I1,J2}.p2	AK088416|Dtymk|21915|deoxythymidylate kinase	AK019445|Dtymk|21915|deoxythymidylate kinase	AK160747|Dtymk|21915|deoxythymidylate kinase	BC069902|Dtymk|21915|deoxythymidylate kinase	AK009220|Dtymk|21915|deoxythymidylate kinase	AK019288|Dtymk|21915|deoxythymidylate kinase	NM_001105667|Dtymk|21915|deoxythymidylate kinase	NM_023136|Dtymk|21915|deoxythymidylate kinase
mm9_v1_chr13_-_115178227_115178301	0.012613	FOX{I1,J2}.p2	AF124785|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	AK020552|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	BC004618|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	AK011124|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	AK020108|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4	NM_010887|Ndufs4|17993|NADH dehydrogenase (ubiquinone) Fe-S protein 4
mm9_v1_chr11_-_113613040_113613139	0.0125763	FOX{I1,J2}.p2	AF165114|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4	BC003857|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4	AK075739|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4	AK165318|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4	NM_001163346|Cdc42ep4|56699|CDC42 effector protein (Rho GTPase binding) 4
mm9_v1_chr4_+_44045506_44045645	0.0124636	FOX{I1,J2}.p2	
mm9_v1_chr16_+_5884885_5884885	0.0124239	FOX{I1,J2}.p2	BC053009|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1	NM_021477|Rbfox1|268859|RNA binding protein, fox-1 homolog (C. elegans) 1
mm9_v1_chr2_+_164659268_164659347	0.0123981	FOX{I1,J2}.p2	AK159150|Ctsa|19025|cathepsin A	AK032197|Ctsa|19025|cathepsin A	AK159766|Ctsa|19025|cathepsin A	BC018534|Ctsa|19025|cathepsin A
mm9_v1_chr1_-_9621172_9621249	0.0119037	FOX{I1,J2}.p2	BC037765|2610203C22Rik|72481|RIKEN cDNA 2610203C22 gene	BC064105|2610203C22Rik|72481|RIKEN cDNA 2610203C22 gene	AK011866|2610203C22Rik|72481|RIKEN cDNA 2610203C22 gene	AK082741|2610203C22Rik|72481|RIKEN cDNA 2610203C22 gene	AK009214|2610203C22Rik|72481|RIKEN cDNA 2610203C22 gene
mm9_v1_chr19_+_9092973_9093058	0.0118483	FOX{I1,J2}.p2	AK003448|Ahnak|66395|AHNAK nucleoprotein (desmoyokin)
mm9_v1_chr5_+_21291100_21291100	0.0117753	FOX{I1,J2}.p2	AK076874|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2	NM_011188|Psmc2|19181|proteasome (prosome, macropain) 26S subunit, ATPase 2
mm9_v1_chr17_-_35371948_35372113	0.0116908	FOX{I1,J2}.p2	X96706|Nfkbil1|18038|nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor-like 1
mm9_v1_chr15_-_89259756_89259902	0.0116607	FOX{I1,J2}.p2	BC068195|Chkb|12651|choline kinase beta	AK170077|Chkb|12651|choline kinase beta
mm9_v1_chr15_+_59162396_59162483	0.011416	FOX{I1,J2}.p2	AK190780|Sqle|20775|squalene epoxidase	AK217980|Sqle|20775|squalene epoxidase
mm9_v1_chr7_-_4397194_4397258	0.0113847	FOX{I1,J2}.p2	AK089458|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	AK034180|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	BC082583|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	AK028434|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)	NM_175372|Rdh13|108841|retinol dehydrogenase 13 (all-trans and 9-cis)
mm9_v1_chr4_-_115742546_115742551	0.0113632	FOX{I1,J2}.p2	AK028137|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein
mm9_v1_chr2_+_34262372_34262384	0.0112806	FOX{I1,J2}.p2	AK042154|Mapkap1|227743|mitogen-activated protein kinase associated protein 1	AK148428|Mapkap1|227743|mitogen-activated protein kinase associated protein 1
mm9_v1_chr17_+_28450461_28450474	0.011232	FOX{I1,J2}.p2	NM_001163819|Fance|72775|Fanconi anemia, complementation group E	NM_001163820|Fance|72775|Fanconi anemia, complementation group E
mm9_v1_chr17_-_13133166_13133267	0.0110448	FOX{I1,J2}.p2	BC049873|Acat3|224530|acetyl-Coenzyme A acetyltransferase 3	AK143884|Acat3|224530|acetyl-Coenzyme A acetyltransferase 3	AK149441|Acat3|224530|acetyl-Coenzyme A acetyltransferase 3	NM_153151|Acat3|224530|acetyl-Coenzyme A acetyltransferase 3	AF356876|Acat3|224530|acetyl-Coenzyme A acetyltransferase 3
mm9_v1_chr11_-_74710462_74710503	0.0110212	FOX{I1,J2}.p2	AK122273|Sgsm2|97761|small G protein signaling modulator 2
mm9_v1_chr6_-_5248335_5248416	0.0109787	FOX{I1,J2}.p2	AK146311|Pon2|330260|paraoxonase 2	AK007350|Pon2|330260|paraoxonase 2	BC062200|Pon2|330260|paraoxonase 2	BC055896|Pon2|330260|paraoxonase 2	NM_183308|Pon2|330260|paraoxonase 2
mm9_v1_chr1_+_72330942_72330988	0.0109493	FOX{I1,J2}.p2	AK034935|Tmem169|271711|transmembrane protein 169	AK043681|Tmem169|271711|transmembrane protein 169	NM_175564|Tmem169|271711|transmembrane protein 169	AK084021|Tmem169|271711|transmembrane protein 169
mm9_v1_chr12_-_82046368_82046382	0.0109476	FOX{I1,J2}.p2	AK145430|LOC100504661|100504661|hypothetical LOC100504661
mm9_v1_chr8_+_74120004_74120094	0.0109307	FOX{I1,J2}.p2	
mm9_v1_chr11_+_98671461_98671474	0.0108418	FOX{I1,J2}.p2	AK145886|Casc3|192160|cancer susceptibility candidate 3
mm9_v1_chr3_+_132772586_132772695	0.0107032	FOX{I1,J2}.p2	AK015941|Ints12|71793|integrator complex subunit 12
mm9_v1_chr17_-_23814399_23814413	0.0105839	FOX{I1,J2}.p2	BC025860|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AF156164|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AK005382|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	AK005530|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a
mm9_v1_chr9_+_108241754_108241796	0.010478	FOX{I1,J2}.p2	AK191208|Gpx1|14775|glutathione peroxidase 1	AK191913|Gpx1|14775|glutathione peroxidase 1	AK200043|Gpx1|14775|glutathione peroxidase 1	AK201721|Gpx1|14775|glutathione peroxidase 1	AK202661|Gpx1|14775|glutathione peroxidase 1	AK205185|Gpx1|14775|glutathione peroxidase 1
mm9_v1_chr16_-_30267577_30267656	0.0104416	FOX{I1,J2}.p2	BC025836|Cpn2|71756|carboxypeptidase N, polypeptide 2	AK005049|Cpn2|71756|carboxypeptidase N, polypeptide 2	NM_027904|Cpn2|71756|carboxypeptidase N, polypeptide 2
mm9_v1_chr8_+_87437219_87437306	0.0102479	FOX{I1,J2}.p2	AK018651|Dnase2a|13423|deoxyribonuclease II alpha	AK010630|Dnase2a|13423|deoxyribonuclease II alpha
mm9_v1_chr11_-_83100174_83100227	0.0102438	FOX{I1,J2}.p2	NM_001166028|Slfn14-ps|237890|schlafen family member 14, pseudogene
mm9_v1_chr19_+_8945985_8946174	0.0102311	FOX{I1,J2}.p2	AK172428|Ubxn1|225896|UBX domain protein 1	BC006701|Ubxn1|225896|UBX domain protein 1	NM_146093|Ubxn1|225896|UBX domain protein 1	AK015468|Ubxn1|225896|UBX domain protein 1	AK150442|Ubxn1|225896|UBX domain protein 1	AK159708|Ubxn1|225896|UBX domain protein 1
mm9_v1_chr16_+_49906392_49906404	0.0101559	FOX{I1,J2}.p2	
mm9_v1_chr2_-_120346171_120346284	0.0101465	FOX{I1,J2}.p2	AF060245|Zfp106|20402|zinc finger protein 106	AK029313|Zfp106|20402|zinc finger protein 106
mm9_v1_chr11_+_43247235_43247249	0.0101123	FOX{I1,J2}.p2	AK047597|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)
mm9_v1_chr7_-_30954705_30954770	0.0101019	FOX{I1,J2}.p2	AJ224763|Zfp146|26465|zinc finger protein 146	AK047696|Zfp146|26465|zinc finger protein 146	NM_011980|Zfp146|26465|zinc finger protein 146	AK037311|Zfp146|26465|zinc finger protein 146
mm9_v1_chr2_-_126719808_126719853	0.0100375	FOX{I1,J2}.p2	AK080421|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene	AK081953|2010106G01Rik|66552|RIKEN cDNA 2010106G01 gene
mm9_v1_chr18_+_78020559_78020576	0.00990321	FOX{I1,J2}.p2	
mm9_v1_chr10_+_110943412_110943638	0.00989835	FOX{I1,J2}.p2	AK158890|Phlda1|21664|pleckstrin homology-like domain, family A, member 1	AK148063|Phlda1|21664|pleckstrin homology-like domain, family A, member 1
mm9_v1_chr2_-_139892477_139892545	0.00982217	FOX{I1,J2}.p2	AK036512|Tasp1|75812|taspase, threonine aspartase 1	NM_175225|Tasp1|75812|taspase, threonine aspartase 1	AK160983|Tasp1|75812|taspase, threonine aspartase 1	NM_001159640|Tasp1|75812|taspase, threonine aspartase 1	NM_001159641|Tasp1|75812|taspase, threonine aspartase 1	AK146320|Tasp1|75812|taspase, threonine aspartase 1	AK132709|Tasp1|75812|taspase, threonine aspartase 1	BC024597|Tasp1|75812|taspase, threonine aspartase 1	AK015624|Tasp1|75812|taspase, threonine aspartase 1
mm9_v1_chr4_+_62141084_62141100	0.00981924	FOX{I1,J2}.p2	BC139079|Bspry|192120|B-box and SPRY domain containing	BC139080|Bspry|192120|B-box and SPRY domain containing	BC145535|Bspry|192120|B-box and SPRY domain containing	AK035588|Bspry|192120|B-box and SPRY domain containing	AK160930|Bspry|192120|B-box and SPRY domain containing	AJ276690|Bspry|192120|B-box and SPRY domain containing	NM_138653|Bspry|192120|B-box and SPRY domain containing
mm9_v1_chr2_-_35973217_35973333	0.00977304	FOX{I1,J2}.p2	
mm9_v1_chr2_+_164705533_164705558	0.00976813	FOX{I1,J2}.p2	
mm9_v1_chr2_-_35316760_35317051	0.00975818	FOX{I1,J2}.p2	BC006810|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AK088605|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	M26925|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	M85153|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AF297615|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	NM_001145821|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	NM_010283|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AK004753|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3	AK159087|Ggta1|14594|glycoprotein galactosyltransferase alpha 1, 3
mm9_v1_chr4_+_150239183_150239284	0.00973253	FOX{I1,J2}.p2	AK205245|Errfi1|74155|ERBB receptor feedback inhibitor 1
mm9_v1_chr6_-_98292747_98292747	0.00960288	FOX{I1,J2}.p2	BC147266|Gm765|330390|predicted gene 765	BC147267|Gm765|330390|predicted gene 765	NM_001128092|Gm765|330390|predicted gene 765
mm9_v1_chr4_-_147183894_147183948	0.00956244	FOX{I1,J2}.p2	NM_001127189|Gm13157|100041677|predicted gene 13157	AK011687|2610036A22Rik|70190|RIKEN cDNA 2610036A22 gene
mm9_v1_chrM_+_1091_1314	0.00954115	FOX{I1,J2}.p2	
mm9_v1_chr3_-_95861723_95861742	0.00950323	FOX{I1,J2}.p2	BC012691|Vps45|22365|vacuolar protein sorting 45 (yeast)
mm9_v1_chr6_-_34827999_34828064	0.00945189	FOX{I1,J2}.p2	AK019439|3110062M04Rik|78412|RIKEN cDNA 3110062M04 gene	BC029235|3110062M04Rik|78412|RIKEN cDNA 3110062M04 gene	AK042380|3110062M04Rik|78412|RIKEN cDNA 3110062M04 gene	AK083365|3110062M04Rik|78412|RIKEN cDNA 3110062M04 gene	AK170119|3110062M04Rik|78412|RIKEN cDNA 3110062M04 gene	NM_001135611|3110062M04Rik|78412|RIKEN cDNA 3110062M04 gene	NM_199145|3110062M04Rik|78412|RIKEN cDNA 3110062M04 gene
mm9_v1_chr6_-_116532961_116533048	0.00935962	FOX{I1,J2}.p2	NM_146446|Olfr215|258438|olfactory receptor 215	BC125561|Olfr215|258438|olfactory receptor 215	BC125563|Olfr215|258438|olfactory receptor 215
mm9_v1_chr17_-_46804730_46804875	0.00932845	FOX{I1,J2}.p2	
mm9_v1_chr9_-_53012444_53012529	0.00926228	FOX{I1,J2}.p2	AK166787|Ddx10|77591|DEAD (Asp-Glu-Ala-Asp) box polypeptide 10
mm9_v1_chr18_-_38157190_38157227	0.00922748	FOX{I1,J2}.p2	AK053122|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	BC068145|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	AK220486|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3	NM_139206|Arap3|106952|ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 3
mm9_v1_chrX_+_35548300_35548338	0.00918966	FOX{I1,J2}.p2	AK080301|Zbtb33|56805|zinc finger and BTB domain containing 33
mm9_v1_chr10_+_57514349_57514589	0.00915576	FOX{I1,J2}.p2	NM_020561|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	Y08135|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	AK002455|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	AK152282|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	BC139288|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	BC139289|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A	AK151683|Smpdl3a|57319|sphingomyelin phosphodiesterase, acid-like 3A
mm9_v1_chr14_+_99498642_99498692	0.00872952	FOX{I1,J2}.p2	AK017107|Pibf1|52023|progesterone immunomodulatory binding factor 1	NM_029320|Pibf1|52023|progesterone immunomodulatory binding factor 1	NM_029454|Pibf1|52023|progesterone immunomodulatory binding factor 1
mm9_v1_chr9_+_59523404_59523469	0.00872469	FOX{I1,J2}.p2	
mm9_v1_chr4_-_135609269_135609274	0.0087159	FOX{I1,J2}.p2	BC025077|Rpl11|67025|ribosomal protein L11
mm9_v1_chr11_+_43247252_43247280	0.00868352	FOX{I1,J2}.p2	BC082780|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	BC025870|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK046262|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK029117|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	AK049178|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)	BC060954|Slu7|193116|SLU7 splicing factor homolog (S. cerevisiae)
mm9_v1_chr7_-_135034440_135034483	0.00865457	FOX{I1,J2}.p2	AK220244|Prss53|330657|protease, serine, 53	BC147509|Prss53|330657|protease, serine, 53	BC151010|Prss53|330657|protease, serine, 53	BC151017|Prss53|330657|protease, serine, 53	BC172059|Prss53|330657|protease, serine, 53	NM_001081268|Prss53|330657|protease, serine, 53
mm9_v1_chr11_-_17853850_17853896	0.00847855	FOX{I1,J2}.p2	BC028916|Etaa1|68145|Ewing's tumor-associated antigen 1	AK034138|Etaa1|68145|Ewing's tumor-associated antigen 1	AK019965|Etaa1|68145|Ewing's tumor-associated antigen 1	NM_026576|Etaa1|68145|Ewing's tumor-associated antigen 1
mm9_v1_chr4_+_59594516_59594564	0.00839234	FOX{I1,J2}.p2	AJ293845|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	AK144948|Hsdl2|72479|hydroxysteroid dehydrogenase like 2	BC002211|Hsdl2|72479|hydroxysteroid dehydrogenase like 2
mm9_v1_chr8_-_73300496_73300620	0.00837945	FOX{I1,J2}.p2	BC085501|Pik3r2|18709|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)	Y13569|Pik3r2|18709|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)	BC006796|Pik3r2|18709|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)	AK146195|Pik3r2|18709|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)	AK148122|Pik3r2|18709|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)	NM_008841|Pik3r2|18709|phosphatidylinositol 3-kinase, regulatory subunit, polypeptide 2 (p85 beta)
mm9_v1_chr17_-_56207814_56207863	0.00837487	FOX{I1,J2}.p2	
mm9_v1_chr4_-_14548903_14548926	0.00822665	FOX{I1,J2}.p2	BC026928|Slc26a7|208890|solute carrier family 26, member 7	AK054327|Slc26a7|208890|solute carrier family 26, member 7	NM_145947|Slc26a7|208890|solute carrier family 26, member 7
mm9_v1_chr19_-_41151561_41151602	0.00813909	FOX{I1,J2}.p2	BC060980|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein	AK140031|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein	NM_153520|Opalin|226115|oligodendrocytic myelin paranodal and inner loop protein
mm9_v1_chrY_-_622984_622997	0.00811096	FOX{I1,J2}.p2	BC021453|Ddx3y|26900|DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
mm9_v1_chr17_+_26793311_26793343	0.00807066	FOX{I1,J2}.p2	
mm9_v1_chr10_+_126602394_126602451	0.00806405	FOX{I1,J2}.p2	BC022180|B4galnt1|14421|beta-1,4-N-acetyl-galactosaminyl transferase 1
mm9_v1_chr1_+_169238962_169239047	0.0079746	FOX{I1,J2}.p2	
mm9_v1_chr8_+_35881739_35881782	0.00789536	FOX{I1,J2}.p2	
mm9_v1_chr11_+_69906145_69906162	0.00778615	FOX{I1,J2}.p2	BC011197|Asgr2|11890|asialoglycoprotein receptor 2	NM_007493|Asgr2|11890|asialoglycoprotein receptor 2
mm9_v1_chr4_-_83132289_83132381	0.00771851	FOX{I1,J2}.p2	BC043079|Psip1|101739|PC4 and SFRS1 interacting protein 1	NM_133948|Psip1|101739|PC4 and SFRS1 interacting protein 1	BC002104|Psip1|101739|PC4 and SFRS1 interacting protein 1	AK161426|Psip1|101739|PC4 and SFRS1 interacting protein 1	AK011572|Psip1|101739|PC4 and SFRS1 interacting protein 1	BC052177|Psip1|101739|PC4 and SFRS1 interacting protein 1
mm9_v1_chr2_-_33323966_33324113	0.00768596	FOX{I1,J2}.p2	AK206442|Zbtb43|71834|zinc finger and BTB domain containing 43	AK212293|Zbtb43|71834|zinc finger and BTB domain containing 43	AK122277|Zbtb43|71834|zinc finger and BTB domain containing 43	AK005818|Zbtb43|71834|zinc finger and BTB domain containing 43	AK147806|Zbtb43|71834|zinc finger and BTB domain containing 43	BC043117|Zbtb43|71834|zinc finger and BTB domain containing 43	NM_001025594|Zbtb43|71834|zinc finger and BTB domain containing 43	NM_027947|Zbtb43|71834|zinc finger and BTB domain containing 43
mm9_v1_chr4_-_147525932_147526290	0.00757836	FOX{I1,J2}.p2	AF176526|Fbxo6|50762|F-box protein 6	AK144715|Fbxo6|50762|F-box protein 6	AK150612|Fbxo6|50762|F-box protein 6	AK165867|Fbxo6|50762|F-box protein 6	NM_001163704|Fbxo6|50762|F-box protein 6	NM_001163705|Fbxo6|50762|F-box protein 6	NM_015797|Fbxo6|50762|F-box protein 6	AK002840|Fbxo6|50762|F-box protein 6	AK170743|Fbxo6|50762|F-box protein 6	AK171483|Fbxo6|50762|F-box protein 6	NM_001163706|Fbxo6|50762|F-box protein 6	NM_001163707|Fbxo6|50762|F-box protein 6
mm9_v1_chr19_-_41289045_41289143	0.00746865	FOX{I1,J2}.p2	AK004050|Tm9sf3|107358|transmembrane 9 superfamily member 3
mm9_v1_chr4_+_153349239_153349351	0.00742202	FOX{I1,J2}.p2	AK143802|BC046331|230967|cDNA sequence BC046331	AK149826|BC046331|230967|cDNA sequence BC046331
mm9_v1_chr3_+_51288108_51288406	0.0072508	FOX{I1,J2}.p2	AK087967|Rab33b|19338|RAB33B, member of RAS oncogene family	AK144706|Rab33b|19338|RAB33B, member of RAS oncogene family	AK004974|Rab33b|19338|RAB33B, member of RAS oncogene family	AK159674|Rab33b|19338|RAB33B, member of RAS oncogene family	AB232629|Rab33b|19338|RAB33B, member of RAS oncogene family	AK170483|Rab33b|19338|RAB33B, member of RAS oncogene family	AK203331|Rab33b|19338|RAB33B, member of RAS oncogene family
mm9_v1_chr4_+_32702401_32702487	0.00720062	FOX{I1,J2}.p2	AK165109|Casp8ap2|26885|caspase 8 associated protein 2	NM_001122978|Casp8ap2|26885|caspase 8 associated protein 2	NM_011997|Casp8ap2|26885|caspase 8 associated protein 2	AK142148|Casp8ap2|26885|caspase 8 associated protein 2	AF132726|Casp8ap2|26885|caspase 8 associated protein 2
mm9_v1_chr6_+_17616617_17616660	0.00716537	FOX{I1,J2}.p2	AK004237|Capza2|12343|capping protein (actin filament) muscle Z-line, alpha 2
mm9_v1_chr17_+_38040466_38040492	0.00701223	FOX{I1,J2}.p2	BC132433|Olfr127|258374|olfactory receptor 127	BC145997|Olfr127|258374|olfactory receptor 127	NM_146377|Olfr127|258374|olfactory receptor 127
mm9_v1_chr2_+_22924561_22924686	0.00699371	FOX{I1,J2}.p2	NM_001102437|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	NM_001102438|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	AK147839|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC053518|Acbd5|74159|acyl-Coenzyme A binding domain containing 5	BC035202|Acbd5|74159|acyl-Coenzyme A binding domain containing 5
mm9_v1_chr9_-_119835967_119836242	0.00692447	FOX{I1,J2}.p2	AK198424|Gorasp1|74498|golgi reassembly stacking protein 1	AK209806|Gorasp1|74498|golgi reassembly stacking protein 1	AK213744|Gorasp1|74498|golgi reassembly stacking protein 1	AK204247|Gorasp1|74498|golgi reassembly stacking protein 1
mm9_v1_chr11_+_19824835_19824933	0.00678685	FOX{I1,J2}.p2	AB063496|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr2_+_28323580_28323619	0.00671984	FOX{I1,J2}.p2	AK051184|Mrps2|118451|mitochondrial ribosomal protein S2	AK172120|Mrps2|118451|mitochondrial ribosomal protein S2	NM_001166031|Mrps2|118451|mitochondrial ribosomal protein S2	NM_080452|Mrps2|118451|mitochondrial ribosomal protein S2	AK154131|Mrps2|118451|mitochondrial ribosomal protein S2	AB055389|Mrps2|118451|mitochondrial ribosomal protein S2	AK160129|Mrps2|118451|mitochondrial ribosomal protein S2	AK165956|Mrps2|118451|mitochondrial ribosomal protein S2	AK156412|Mrps2|118451|mitochondrial ribosomal protein S2	AK171699|Mrps2|118451|mitochondrial ribosomal protein S2	AK172432|Mrps2|118451|mitochondrial ribosomal protein S2	BC048377|Mrps2|118451|mitochondrial ribosomal protein S2	BC033460|Mrps2|118451|mitochondrial ribosomal protein S2	BC060503|Mrps2|118451|mitochondrial ribosomal protein S2
mm9_v1_chr9_+_106091656_106091698	0.00669012	FOX{I1,J2}.p2	BC054453|Wdr82|77305|WD repeat domain containing 82	BC112907|Wdr82|77305|WD repeat domain containing 82	BC044669|Wdr82|77305|WD repeat domain containing 82
mm9_v1_chr6_+_77193078_77193105	0.00668907	FOX{I1,J2}.p2	AK053364|Lrrtm1|74342|leucine rich repeat transmembrane neuronal 1
mm9_v1_chr1_-_141755209_141755302	0.00659322	FOX{I1,J2}.p2	AJ565908|BC026782|545366|cDNA sequence BC026782	M29007|BC026782|545366|cDNA sequence BC026782	AK149511|BC026782|545366|cDNA sequence BC026782	NM_001025575|BC026782|545366|cDNA sequence BC026782
mm9_v1_chr19_+_36422888_36423026	0.00655401	FOX{I1,J2}.p2	AK002387|Pcgf5|76073|polycomb group ring finger 5	AK080025|Pcgf5|76073|polycomb group ring finger 5
mm9_v1_chr1_+_58561979_58562000	0.00649809	FOX{I1,J2}.p2	AK138448|Gm15834|100306960|predicted gene 15834	AK144771|Gm15834|100306960|predicted gene 15834	AK053027|Gm15834|100306960|predicted gene 15834
mm9_v1_chr12_+_112655640_112655799	0.00637855	FOX{I1,J2}.p2	NM_028807|1200009I06Rik|74190|RIKEN cDNA 1200009I06 gene	AK004674|1200009I06Rik|74190|RIKEN cDNA 1200009I06 gene	BC075664|1200009I06Rik|74190|RIKEN cDNA 1200009I06 gene
mm9_v1_chr7_+_63305622_63305758	0.00635683	FOX{I1,J2}.p2	AF071173|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2	AF061529|Herc2|15204|hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and RCC1 (CHC1)-like domain (RLD) 2
mm9_v1_chr8_+_95379212_95379353	0.00614507	FOX{I1,J2}.p2	AK039431|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2	NM_173014|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2	BC144806|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2	BC150666|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2	AB244716|Lpcat2|270084|lysophosphatidylcholine acyltransferase 2
mm9_v1_chr2_-_32137306_32137330	0.0061237	FOX{I1,J2}.p2	AB597965|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene	AK216650|2900010J23Rik|72931|RIKEN cDNA 2900010J23 gene
mm9_v1_chr5_+_104868321_104868417	0.00604133	FOX{I1,J2}.p2	BC014284|Spp1|20750|secreted phosphoprotein 1
mm9_v1_chr1_-_133964485_133964532	0.00603838	FOX{I1,J2}.p2	AK079372|Mfsd4|213006|major facilitator superfamily domain containing 4	BC058790|Mfsd4|213006|major facilitator superfamily domain containing 4	AK044667|Mfsd4|213006|major facilitator superfamily domain containing 4	AK085484|Mfsd4|213006|major facilitator superfamily domain containing 4	BC080198|Mfsd4|213006|major facilitator superfamily domain containing 4	AK038882|Mfsd4|213006|major facilitator superfamily domain containing 4
mm9_v1_chr6_+_54251485_54251608	0.00601394	FOX{I1,J2}.p2	
mm9_v1_chr5_+_13399301_13399308	0.0060018	FOX{I1,J2}.p2	D85028|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A	NM_009152|Sema3a|20346|sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A
mm9_v1_chr4_-_134885357_134885401	0.00599764	FOX{I1,J2}.p2	AK219253|Srrm1|51796|serine/arginine repetitive matrix 1
mm9_v1_chr9_-_83003967_83004006	0.00590064	FOX{I1,J2}.p2	
mm9_v1_chr13_+_91881065_91881204	0.00587602	FOX{I1,J2}.p2	AK034622|Acot12|74156|acyl-CoA thioesterase 12	AK004905|Acot12|74156|acyl-CoA thioesterase 12	AK033663|Acot12|74156|acyl-CoA thioesterase 12	NM_028790|Acot12|74156|acyl-CoA thioesterase 12	AB078618|Acot12|74156|acyl-CoA thioesterase 12	BC025852|Acot12|74156|acyl-CoA thioesterase 12
mm9_v1_chr18_-_80904852_80904931	0.00578881	FOX{I1,J2}.p2	EU887569|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887571|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	EU887572|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AF049606|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	AK004810|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164111|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_001164112|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1	NM_016791|Nfatc1|18018|nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
mm9_v1_chr4_+_119487105_119487332	0.00577375	FOX{I1,J2}.p2	AY454348|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	BC058336|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	NM_010657|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3	AY454345|Hivep3|16656|human immunodeficiency virus type I enhancer binding protein 3
mm9_v1_chr7_+_138122822_138122930	0.00567735	FOX{I1,J2}.p2	AK090321|Htra1|56213|HtrA serine peptidase 1
mm9_v1_chr1_+_24685377_24685468	0.0056255	FOX{I1,J2}.p2	NM_026719|Lmbrd1|68421|LMBR1 domain containing 1	BC039053|Lmbrd1|68421|LMBR1 domain containing 1
mm9_v1_chr4_-_86873866_86873867	0.00557742	FOX{I1,J2}.p2	NM_001110240|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC115867|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2	BC116637|Slc24a2|76376|solute carrier family 24 (sodium/potassium/calcium exchanger), member 2
mm9_v1_chr18_-_56732522_56732548	0.00553951	FOX{I1,J2}.p2	AK004991|Aldh7a1|110695|aldehyde dehydrogenase family 7, member A1
mm9_v1_chr5_-_105411580_105411736	0.00529385	FOX{I1,J2}.p2	BC029095|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK037614|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AF324242|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK051880|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK156626|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	BC138773|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	BC138772|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	NM_030239|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3	AK030831|Abcg3|27405|ATP-binding cassette, sub-family G (WHITE), member 3
mm9_v1_chr6_-_136824217_136824271	0.0052799	FOX{I1,J2}.p2	BC018338|Mgp|17313|matrix Gla protein	D00613|Mgp|17313|matrix Gla protein
mm9_v1_chr10_-_127444563_127444662	0.00519938	FOX{I1,J2}.p2	BC021836|Hsd17b6|27400|hydroxysteroid (17-beta) dehydrogenase 6	NM_013786|Hsd17b6|27400|hydroxysteroid (17-beta) dehydrogenase 6	AK008212|Hsd17b6|27400|hydroxysteroid (17-beta) dehydrogenase 6
mm9_v1_chr11_+_80196766_80196898	0.00518489	FOX{I1,J2}.p2	AK087885|Zfp207|22680|zinc finger protein 207	NM_001130169|Zfp207|22680|zinc finger protein 207	NM_001130170|Zfp207|22680|zinc finger protein 207	NM_001130171|Zfp207|22680|zinc finger protein 207	NM_011751|Zfp207|22680|zinc finger protein 207	AK140139|Zfp207|22680|zinc finger protein 207	AK146787|Zfp207|22680|zinc finger protein 207	AK159683|Zfp207|22680|zinc finger protein 207	AK033497|Zfp207|22680|zinc finger protein 207	BC003715|Zfp207|22680|zinc finger protein 207	AB013357|Zfp207|22680|zinc finger protein 207	AB032196|Zfp207|22680|zinc finger protein 207
mm9_v1_chr7_-_133938863_133938974	0.00514793	FOX{I1,J2}.p2	
mm9_v1_chr15_+_97794629_97794751	0.00503217	FOX{I1,J2}.p2	AK134684|Tmem106c|380967|transmembrane protein 106C	BC046621|Tmem106c|380967|transmembrane protein 106C	NM_201359|Tmem106c|380967|transmembrane protein 106C
mm9_v1_chr1_-_186635045_186635085	0.00499569	FOX{I1,J2}.p2	AK011722|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1	AK004989|Mosc1|66112|MOCO sulphurase C-terminal domain containing 1
mm9_v1_chr11_-_61080588_61080704	0.00495781	FOX{I1,J2}.p2	BC003797|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	U14390|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK079571|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK079639|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK148462|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK163040|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK169157|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK170251|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	NM_007437|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK086262|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK051219|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK078243|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK170195|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK152156|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK152735|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK152800|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK140932|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2	AK159246|Aldh3a2|11671|aldehyde dehydrogenase family 3, subfamily A2
mm9_v1_chr2_-_5765967_5766039	0.0048544	FOX{I1,J2}.p2	BC019753|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	BC023821|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	AK141463|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	AK161246|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	BC024787|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	BC022972|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	AK090122|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	NM_133837|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)	AK159208|Cdc123|98828|cell division cycle 123 homolog (S. cerevisiae)
mm9_v1_chr11_-_54769601_54769632	0.0048188	FOX{I1,J2}.p2	AK135338|Tnip1|57783|TNFAIP3 interacting protein 1
mm9_v1_chr1_-_158869401_158869517	0.0047713	FOX{I1,J2}.p2	AK019543|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2	NM_001159966|Ralgps2|78255|Ral GEF with PH domain and SH3 binding motif 2
mm9_v1_chr2_-_25483295_25483445	0.0047429	FOX{I1,J2}.p2	AB222271|Fcna|14133|ficolin A	CT010383|Fcna|14133|ficolin A	AB007813|Fcna|14133|ficolin A	BC019180|Fcna|14133|ficolin A	AK138752|Fcna|14133|ficolin A
mm9_v1_chr18_+_37089837_37089938	0.00453626	FOX{I1,J2}.p2	BC082326|Pcdha1|116731|protocadherin alpha 1	AY013756|Pcdha1|116731|protocadherin alpha 1	NM_054072|Pcdha1|116731|protocadherin alpha 1
mm9_v1_chr2_+_110561733_110561771	0.00449784	FOX{I1,J2}.p2	AY198336|Muc15|269328|mucin 15	AK052840|Muc15|269328|mucin 15	AK142590|Muc15|269328|mucin 15	NM_172979|Muc15|269328|mucin 15	BC094506|Muc15|269328|mucin 15	BC116796|Muc15|269328|mucin 15	BC119176|Muc15|269328|mucin 15
mm9_v1_chr10_+_62487259_62487259	0.00446469	FOX{I1,J2}.p2	AK014198|Pbld2|67307|phenazine biosynthesis-like protein domain containing 2	NM_026085|Pbld2|67307|phenazine biosynthesis-like protein domain containing 2
mm9_v1_chr10_+_40199817_40199881	0.00445108	FOX{I1,J2}.p2	AK030146|Cdk19|78334|cyclin-dependent kinase 19
mm9_v1_chr10_-_93052348_93052428	0.00443665	FOX{I1,J2}.p2	BC066015|Snrpf|69878|small nuclear ribonucleoprotein polypeptide F	AK135835|Snrpf|69878|small nuclear ribonucleoprotein polypeptide F	AK008240|Snrpf|69878|small nuclear ribonucleoprotein polypeptide F	NM_027246|Snrpf|69878|small nuclear ribonucleoprotein polypeptide F	BC100499|Snrpf|69878|small nuclear ribonucleoprotein polypeptide F
mm9_v1_chr17_+_13414053_13414053	0.00434807	FOX{I1,J2}.p2	AJ245453|Smok2a|27263|sperm motility kinase 2A	NM_013741|Smok2a|27263|sperm motility kinase 2A
mm9_v1_chr6_+_21899614_21899692	0.00434434	FOX{I1,J2}.p2	NM_023626|Ing3|71777|inhibitor of growth family, member 3	AY007791|Ing3|71777|inhibitor of growth family, member 3	AK080787|Ing3|71777|inhibitor of growth family, member 3	AK131993|Ing3|71777|inhibitor of growth family, member 3	BC018342|Ing3|71777|inhibitor of growth family, member 3
mm9_v1_chr10_+_39332934_39333058	0.00428978	FOX{I1,J2}.p2	AK037407|Traf3ip2|103213|TRAF3 interacting protein 2	BC138234|Traf3ip2|103213|TRAF3 interacting protein 2	BC138235|Traf3ip2|103213|TRAF3 interacting protein 2	AK031556|Traf3ip2|103213|TRAF3 interacting protein 2	AK098107|Traf3ip2|103213|TRAF3 interacting protein 2	BC096483|Traf3ip2|103213|TRAF3 interacting protein 2
mm9_v1_chr9_-_36540210_36540345	0.0042658	FOX{I1,J2}.p2	AK017358|Stt3a|16430|STT3, subunit of the oligosaccharyltransferase complex, homolog A (S. cerevisiae)
mm9_v1_chr8_+_109127326_109127398	0.00414936	FOX{I1,J2}.p2	X06115|Cdh1|12550|cadherin 1
mm9_v1_chr8_+_74116052_74116115	0.00402659	FOX{I1,J2}.p2	AK044914|Pgls|66171|6-phosphogluconolactonase	AK003985|Pgls|66171|6-phosphogluconolactonase	AK036059|Pgls|66171|6-phosphogluconolactonase	NM_025396|Pgls|66171|6-phosphogluconolactonase	AK172066|Pgls|66171|6-phosphogluconolactonase	AK003134|Pgls|66171|6-phosphogluconolactonase	AK028344|Pgls|66171|6-phosphogluconolactonase	BC006594|Pgls|66171|6-phosphogluconolactonase
mm9_v1_chr11_+_98543871_98543951	0.00398043	FOX{I1,J2}.p2	AK031366|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK145467|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK145488|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK164593|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK169690|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK166714|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK167005|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK164333|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK166683|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK089933|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK167285|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK077252|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK165520|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	AK153505|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
mm9_v1_chr4_-_115747643_115747689	0.00393905	FOX{I1,J2}.p2	AK012552|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	AK018712|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein	NM_025641|Uqcrh|66576|ubiquinol-cytochrome c reductase hinge protein
mm9_v1_chr10_+_62383400_62383491	0.0039348	FOX{I1,J2}.p2	BC062168|Slc25a16|73132|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16	BC138983|Slc25a16|73132|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16	BC138984|Slc25a16|73132|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16	BC025015|Slc25a16|73132|solute carrier family 25 (mitochondrial carrier, Graves disease autoantigen), member 16
mm9_v1_chr8_+_96561180_96561211	0.00387709	FOX{I1,J2}.p2	AK122532|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1	AK164189|Ogfod1|270086|2-oxoglutarate and iron-dependent oxygenase domain containing 1
mm9_v1_chr17_-_23814415_23814446	0.00384986	FOX{I1,J2}.p2	AK160136|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_001161746|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a	NM_013749|Tnfrsf12a|27279|tumor necrosis factor receptor superfamily, member 12a
mm9_v1_chr18_+_67801208_67801282	0.00369412	FOX{I1,J2}.p2	AB031387|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK006069|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	NM_134138|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK167840|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK135578|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	AK077569|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2	BC016606|Psmg2|107047|proteasome (prosome, macropain) assembly chaperone 2
mm9_v1_chr16_-_17561311_17561339	0.00356423	FOX{I1,J2}.p2	AK143245|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK039092|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	BC115678|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	BC115679|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK132588|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	AK161226|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	NM_001145435|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene	NM_029053|4930451C15Rik|74685|RIKEN cDNA 4930451C15 gene
mm9_v1_chr12_-_56403949_56403990	0.00353362	FOX{I1,J2}.p2	BC024754|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK028063|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AB041577|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK033405|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK163192|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	AK168298|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma	NM_021529|Ppp2r3c|59032|protein phosphatase 2, regulatory subunit B'', gamma
mm9_v1_chr12_-_32036212_32036317	0.00353328	FOX{I1,J2}.p2	AK168875|Dld|13382|dihydrolipoamide dehydrogenase	BC003368|Dld|13382|dihydrolipoamide dehydrogenase	AK135807|Dld|13382|dihydrolipoamide dehydrogenase	AK014092|Dld|13382|dihydrolipoamide dehydrogenase	AK117104|Dld|13382|dihydrolipoamide dehydrogenase	AK136193|Dld|13382|dihydrolipoamide dehydrogenase	AK153399|Dld|13382|dihydrolipoamide dehydrogenase	AK167885|Dld|13382|dihydrolipoamide dehydrogenase	AK168157|Dld|13382|dihydrolipoamide dehydrogenase	NM_007861|Dld|13382|dihydrolipoamide dehydrogenase	U73445|Dld|13382|dihydrolipoamide dehydrogenase
mm9_v1_chr1_-_14745828_14746072	0.00343513	FOX{I1,J2}.p2	AB221639|Msc|17681|musculin	AF108216|Msc|17681|musculin	BC103594|Msc|17681|musculin	BC103592|Msc|17681|musculin	BC103593|Msc|17681|musculin	BC103623|Msc|17681|musculin	AF087035|Msc|17681|musculin	NM_010827|Msc|17681|musculin	AK138917|Msc|17681|musculin
mm9_v1_chr3_-_122241909_122241984	0.00338777	FOX{I1,J2}.p2	AK019185|Fnbp1l|214459|formin binding protein 1-like
mm9_v1_chr5_+_115303672_115303722	0.0033108	FOX{I1,J2}.p2	AK015857|4930519G04Rik|67593|RIKEN cDNA 4930519G04 gene	AK015843|4930519G04Rik|67593|RIKEN cDNA 4930519G04 gene	NM_026263|4930519G04Rik|67593|RIKEN cDNA 4930519G04 gene
mm9_v1_chr10_+_69903415_69903494	0.0032363	FOX{I1,J2}.p2	AK081939|Fam13c|71721|family with sequence similarity 13, member C	NM_001143777|Fam13c|71721|family with sequence similarity 13, member C	AK036299|Fam13c|71721|family with sequence similarity 13, member C	AK039513|Fam13c|71721|family with sequence similarity 13, member C	AK044049|Fam13c|71721|family with sequence similarity 13, member C
mm9_v1_chr8_-_91159932_91160026	0.00320585	FOX{I1,J2}.p2	BC039809|Snx20|71607|sorting nexin 20	AK157032|Snx20|71607|sorting nexin 20	AK157884|Snx20|71607|sorting nexin 20	AK170109|Snx20|71607|sorting nexin 20	AK042068|Snx20|71607|sorting nexin 20	AK018632|Snx20|71607|sorting nexin 20	NM_027840|Snx20|71607|sorting nexin 20
mm9_v1_chr13_+_4058817_4058874	0.00318259	FOX{I1,J2}.p2	AK086887|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK033537|Akr1c14|105387|aldo-keto reductase family 1, member C14	AK136528|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC013482|Akr1c14|105387|aldo-keto reductase family 1, member C14	NM_134072|Akr1c14|105387|aldo-keto reductase family 1, member C14	BC026628|Akr1c14|105387|aldo-keto reductase family 1, member C14	AY730283|Akr1c14|105387|aldo-keto reductase family 1, member C14
mm9_v1_chr5_-_138596915_138596971	0.00317433	FOX{I1,J2}.p2	BC052453|Zfp113|56314|zinc finger protein 113	BC054525|Zfp113|56314|zinc finger protein 113	BC056991|Zfp113|56314|zinc finger protein 113	AF167320|Zfp113|56314|zinc finger protein 113	AK076349|Zfp113|56314|zinc finger protein 113	AK220556|Zfp113|56314|zinc finger protein 113	NM_019747|Zfp113|56314|zinc finger protein 113
mm9_v1_chr7_+_80520360_80520429	0.00312852	FOX{I1,J2}.p2	AK082560|Rgma|244058|RGM domain family, member A	BC059072|Rgma|244058|RGM domain family, member A	NM_177740|Rgma|244058|RGM domain family, member A
mm9_v1_chr14_-_50940507_50940542	0.00312003	FOX{I1,J2}.p2	NM_146664|Olfr734|258658|olfactory receptor 734	BC141029|Olfr734|258658|olfactory receptor 734
mm9_v1_chr6_-_3295980_3296101	0.00311265	FOX{I1,J2}.p2	AK035387|9530028C05|330256|hypothetical protein 9530028C05
mm9_v1_chr2_-_144353120_144353132	0.00308533	FOX{I1,J2}.p2	AK032632|6330439K17Rik|241688|RIKEN cDNA 6330439K17 gene	AK163994|6330439K17Rik|241688|RIKEN cDNA 6330439K17 gene
mm9_v1_chr14_+_31292750_31292775	0.00294208	FOX{I1,J2}.p2	AJ344447|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)	NM_133761|Dcp1a|75901|DCP1 decapping enzyme homolog A (S. cerevisiae)
mm9_v1_chr7_-_144506112_144506127	0.0028549	FOX{I1,J2}.p2	AK220542|Ebf3|13593|early B-cell factor 3	NM_001113414|Ebf3|13593|early B-cell factor 3	NM_001113415|Ebf3|13593|early B-cell factor 3	NM_010096|Ebf3|13593|early B-cell factor 3
mm9_v1_chr6_-_97409251_97409295	0.00262585	FOX{I1,J2}.p2	AK129262|Frmd4b|232288|FERM domain containing 4B
mm9_v1_chr2_+_38441497_38441644	0.0025082	FOX{I1,J2}.p2	AK214670|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6	AK208733|Nek6|59126|NIMA (never in mitosis gene a)-related expressed kinase 6
mm9_v1_chr3_-_83645498_83645507	0.00247695	FOX{I1,J2}.p2	AK154504|Tlr2|24088|toll-like receptor 2
mm9_v1_chr10_+_61178010_61178080	0.00245472	FOX{I1,J2}.p2	NM_001039194|Aifm2|71361|apoptosis-inducing factor, mitochondrion-associated 2	NM_178058|Aifm2|71361|apoptosis-inducing factor, mitochondrion-associated 2	AK017403|Aifm2|71361|apoptosis-inducing factor, mitochondrion-associated 2	AK147741|Aifm2|71361|apoptosis-inducing factor, mitochondrion-associated 2	AK085656|Aifm2|71361|apoptosis-inducing factor, mitochondrion-associated 2	AK155240|Aifm2|71361|apoptosis-inducing factor, mitochondrion-associated 2
mm9_v1_chr15_+_89259892_89260019	0.00242761	FOX{I1,J2}.p2	AK083297|C730034F03Rik|319362|RIKEN cDNA C730034F03 gene	AK053866|C730034F03Rik|319362|RIKEN cDNA C730034F03 gene
mm9_v1_chr3_+_108743001_108743040	0.00237352	FOX{I1,J2}.p2	AK085587|4921515J06Rik|66715|RIKEN cDNA 4921515J06 gene	NM_025723|4921515J06Rik|66715|RIKEN cDNA 4921515J06 gene	AK014900|4921515J06Rik|66715|RIKEN cDNA 4921515J06 gene
mm9_v1_chr14_+_35147355_35147375	0.00236403	FOX{I1,J2}.p2	AK219236|Glud1|14661|glutamate dehydrogenase 1
mm9_v1_chr15_+_25870456_25870763	0.00234722	FOX{I1,J2}.p2	AK167327|Fam134b|66270|family with sequence similarity 134, member B	AK146972|Fam134b|66270|family with sequence similarity 134, member B	BC019494|Fam134b|66270|family with sequence similarity 134, member B	NM_025459|Fam134b|66270|family with sequence similarity 134, member B	BC054415|Fam134b|66270|family with sequence similarity 134, member B
mm9_v1_chr1_+_182837982_182838044	0.00231914	FOX{I1,J2}.p2	AK187139|Pycr2|69051|pyrroline-5-carboxylate reductase family, member 2
mm9_v1_chr10_-_116782524_116782604	0.00227168	FOX{I1,J2}.p2	AK086495|Cpsf6|432508|cleavage and polyadenylation specific factor 6
mm9_v1_chr2_+_125684938_125684961	0.00225495	FOX{I1,J2}.p2	AK082521|Galk2|69976|galactokinase 2	NM_175154|Galk2|69976|galactokinase 2
mm9_v1_chr8_-_11550681_11550711	0.00213576	FOX{I1,J2}.p2	
mm9_v1_chr2_-_164630347_164630363	0.00211457	FOX{I1,J2}.p2	AK033724|Acot8|170789|acyl-CoA thioesterase 8	BC005792|Acot8|170789|acyl-CoA thioesterase 8	AK151924|Acot8|170789|acyl-CoA thioesterase 8
mm9_v1_chr17_-_13153182_13153211	0.00210808	FOX{I1,J2}.p2	AK013275|Acat2|110460|acetyl-Coenzyme A acetyltransferase 2
mm9_v1_chr7_+_107422781_107422864	0.00199707	FOX{I1,J2}.p2	AK043357|Pgm2l1|70974|phosphoglucomutase 2-like 1
mm9_v1_chr14_-_21437545_21437583	0.00199529	FOX{I1,J2}.p2	AK047620|Usp54|78787|ubiquitin specific peptidase 54	NM_030180|Usp54|78787|ubiquitin specific peptidase 54
mm9_v1_chr11_-_100355280_100355392	0.00189957	FOX{I1,J2}.p2	AK136812|Acly|104112|ATP citrate lyase	AK043434|Acly|104112|ATP citrate lyase
mm9_v1_chr10_-_43621485_43621487	0.00179313	FOX{I1,J2}.p2	AK170225|Qrsl1|76563|glutaminyl-tRNA synthase (glutamine-hydrolyzing)-like 1
mm9_v1_chr5_-_22252628_22252724	0.00177985	FOX{I1,J2}.p2	BC030424|A930003O13Rik|330052|RIKEN cDNA A930003O13 gene	AK044256|A930003O13Rik|330052|RIKEN cDNA A930003O13 gene
mm9_v1_chr5_+_108741806_108741943	0.001758	FOX{I1,J2}.p2	NM_001081234|Pigg|433931|phosphatidylinositol glycan anchor biosynthesis, class G
mm9_v1_chr9_+_22280158_22280205	0.00171729	FOX{I1,J2}.p2	BC046426|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	NM_178415|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	NM_181316|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	AK166297|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	AK086114|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	AK144730|Bbs9|319845|Bardet-Biedl syndrome 9 (human)	AK028200|Bbs9|319845|Bardet-Biedl syndrome 9 (human)
mm9_v1_chr14_-_73109254_73109390	0.0017033	FOX{I1,J2}.p2	AK154790|Fndc3a|319448|fibronectin type III domain containing 3A	AK172458|Fndc3a|319448|fibronectin type III domain containing 3A
mm9_v1_chr1_+_75479559_75479687	0.00166795	FOX{I1,J2}.p2	BC042776|Tmem198|319998|transmembrane protein 198	BC046546|Tmem198|319998|transmembrane protein 198
mm9_v1_chr11_+_49057692_49057775	0.0016161	FOX{I1,J2}.p2	NM_001110148|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	NM_010794|Mgat1|17308|mannoside acetylglucosaminyltransferase 1	BC031752|Mgat1|17308|mannoside acetylglucosaminyltransferase 1
mm9_v1_chr15_-_32174172_32174174	0.00155694	FOX{I1,J2}.p2	AK007520|Snord123|66835|small nucleolar RNA, C/D box 123
mm9_v1_chr13_-_96145269_96145292	0.00153152	FOX{I1,J2}.p2	AK017248|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AK008168|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AK008174|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AK008399|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	AY500995|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	BC052410|Aggf1|66549|angiogenic factor with G patch and FHA domains 1	NM_025630|Aggf1|66549|angiogenic factor with G patch and FHA domains 1
mm9_v1_chr3_-_27609279_27609407	0.00148854	FOX{I1,J2}.p2	AB098596|Fndc3b|72007|fibronectin type III domain containing 3B	AK147346|Fndc3b|72007|fibronectin type III domain containing 3B	AK220297|Fndc3b|72007|fibronectin type III domain containing 3B	NM_173182|Fndc3b|72007|fibronectin type III domain containing 3B	BC067389|Fndc3b|72007|fibronectin type III domain containing 3B
mm9_v1_chr11_-_98261715_98261736	0.00147631	FOX{I1,J2}.p2	AK170817|Pgap3|320655|post-GPI attachment to proteins 3	AK052486|Pgap3|320655|post-GPI attachment to proteins 3	AK078974|Pgap3|320655|post-GPI attachment to proteins 3	BC035945|Pgap3|320655|post-GPI attachment to proteins 3
mm9_v1_chr4_-_19447698_19447753	0.00143666	FOX{I1,J2}.p2	BC053980|Cpne3|70568|copine III
mm9_v1_chr2_-_26207615_26207656	0.00142601	FOX{I1,J2}.p2	AK004089|Dnlz|52838|DNL-type zinc finger	AK142070|Dnlz|52838|DNL-type zinc finger	NM_001139503|Dnlz|52838|DNL-type zinc finger	NM_001139504|Dnlz|52838|DNL-type zinc finger	NM_026828|Dnlz|52838|DNL-type zinc finger
mm9_v1_chr9_-_99336923_99337150	0.00141815	FOX{I1,J2}.p2	AK050469|Mras|17532|muscle and microspikes RAS	AB004879|Mras|17532|muscle and microspikes RAS	NM_008624|Mras|17532|muscle and microspikes RAS
mm9_v1_chr9_-_14304843_14304925	0.0014094	FOX{I1,J2}.p2	AK155227|Kdm4d|244694|lysine (K)-specific demethylase 4D	AK030020|Kdm4d|244694|lysine (K)-specific demethylase 4D	NM_173433|Kdm4d|244694|lysine (K)-specific demethylase 4D
mm9_v1_chr17_-_63230665_63230665	0.00130042	FOX{I1,J2}.p2	BC040218|Efna5|13640|ephrin A5	NM_010109|Efna5|13640|ephrin A5	NM_207654|Efna5|13640|ephrin A5
mm9_v1_chr17_+_36974084_36974137	0.00115019	FOX{I1,J2}.p2	AK171019|Trim26|22670|tripartite motif-containing 26	NM_001025599|Trim26|22670|tripartite motif-containing 26	AK042252|Trim26|22670|tripartite motif-containing 26	BC037110|Trim26|22670|tripartite motif-containing 26
mm9_v1_chr14_+_49066100_49066253	0.0010801	FOX{I1,J2}.p2	BC059217|6720456H20Rik|218989|RIKEN cDNA 6720456H20 gene
mm9_v1_chr14_-_73924950_73925048	0.00101935	FOX{I1,J2}.p2	AK043196|Nudt15|214254|nudix (nucleoside diphosphate linked moiety X)-type motif 15	AK168451|Nudt15|214254|nudix (nucleoside diphosphate linked moiety X)-type motif 15	BC060962|Nudt15|214254|nudix (nucleoside diphosphate linked moiety X)-type motif 15	AK032657|Nudt15|214254|nudix (nucleoside diphosphate linked moiety X)-type motif 15
mm9_v1_chr3_+_32607424_32607471	0.000959912	FOX{I1,J2}.p2	NM_019673|Actl6a|56456|actin-like 6A	AK013221|Actl6a|56456|actin-like 6A
mm9_v1_chr16_+_17045284_17045304	0.000950197	FOX{I1,J2}.p2	AK018549|Mapk1|26413|mitogen-activated protein kinase 1
mm9_v1_chr4_-_154010435_154010475	0.000929412	FOX{I1,J2}.p2	AK042640|5930403L14Rik|320939|RIKEN cDNA 5930403L14 gene	AK141913|5930403L14Rik|320939|RIKEN cDNA 5930403L14 gene
mm9_v1_chr4_-_87452140_87452217	0.000862072	FOX{I1,J2}.p2	AK147009|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK008707|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	AK019458|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3	NM_029931|Mllt3|70122|myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
mm9_v1_chr11_-_118025722_118025748	0.000851366	FOX{I1,J2}.p2	AK210975|Cyth1|19157|cytohesin 1
mm9_v1_chr11_+_120459840_120459845	0.000849865	FOX{I1,J2}.p2	NM_001038230|Anapc11|66156|anaphase promoting complex subunit 11
mm9_v1_chr11_+_98543867_98543870	0.000837941	FOX{I1,J2}.p2	BC003197|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3	NM_009439|Psmd3|22123|proteasome (prosome, macropain) 26S subunit, non-ATPase, 3
mm9_v1_chr11_-_86621130_86621161	0.000837819	FOX{I1,J2}.p2	AK029935|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	AK010512|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40	NM_026191|Dhx40|67487|DEAH (Asp-Glu-Ala-His) box polypeptide 40
mm9_v1_chr11_+_53583927_53584130	0.000787779	FOX{I1,J2}.p2	NM_001159396|Irf1|16362|interferon regulatory factor 1	BC003821|Irf1|16362|interferon regulatory factor 1
mm9_v1_chr7_-_112730004_112730048	0.000730267	FOX{I1,J2}.p2	AK144340|Apbb1|11785|amyloid beta (A4) precursor protein-binding, family B, member 1	AK030748|Apbb1|11785|amyloid beta (A4) precursor protein-binding, family B, member 1	NM_009685|Apbb1|11785|amyloid beta (A4) precursor protein-binding, family B, member 1
mm9_v1_chr7_+_57165668_57165722	0.000725029	FOX{I1,J2}.p2	BC157997|Slc6a5|104245|solute carrier family 6 (neurotransmitter transporter, glycine), member 5	BC172125|Slc6a5|104245|solute carrier family 6 (neurotransmitter transporter, glycine), member 5	NM_001146013|Slc6a5|104245|solute carrier family 6 (neurotransmitter transporter, glycine), member 5	AB118159|Slc6a5|104245|solute carrier family 6 (neurotransmitter transporter, glycine), member 5
mm9_v1_chr16_-_11134587_11134761	0.000700041	FOX{I1,J2}.p2	AK157288|Txndc11|106200|thioredoxin domain containing 11	BC029643|Txndc11|106200|thioredoxin domain containing 11	NM_029582|Txndc11|106200|thioredoxin domain containing 11	AK156154|Txndc11|106200|thioredoxin domain containing 11	AK170352|Txndc11|106200|thioredoxin domain containing 11	AK013044|Txndc11|106200|thioredoxin domain containing 11	AK155844|Txndc11|106200|thioredoxin domain containing 11	AK159484|Txndc11|106200|thioredoxin domain containing 11	BC020363|Txndc11|106200|thioredoxin domain containing 11	AK139620|Txndc11|106200|thioredoxin domain containing 11	AK157948|Txndc11|106200|thioredoxin domain containing 11	AK156590|Txndc11|106200|thioredoxin domain containing 11	AK029166|Txndc11|106200|thioredoxin domain containing 11
mm9_v1_chr9_+_46081146_46081375	0.000655329	FOX{I1,J2}.p2	NM_011752|Zfp259|22687|zinc finger protein 259	AK158995|Zfp259|22687|zinc finger protein 259	AK170372|Zfp259|22687|zinc finger protein 259	AK044472|Zfp259|22687|zinc finger protein 259	AB041612|Zfp259|22687|zinc finger protein 259	BC021397|Zfp259|22687|zinc finger protein 259	AK167849|Zfp259|22687|zinc finger protein 259	AK168061|Zfp259|22687|zinc finger protein 259	AK215085|Zfp259|22687|zinc finger protein 259
mm9_v1_chr17_+_17511271_17511295	0.000632751	FOX{I1,J2}.p2	BC080771|Riok2|67045|RIO kinase 2 (yeast)	NM_025934|Riok2|67045|RIO kinase 2 (yeast)
mm9_v1_chr11_+_19824374_19824394	0.000587296	FOX{I1,J2}.p2	BC066013|Spred2|114716|sprouty-related, EVH1 domain containing 2
mm9_v1_chr4_-_4065205_4065229	0.000553175	FOX{I1,J2}.p2	M13227|Penk|18619|preproenkephalin
mm9_v1_chr9_+_21807887_21807962	0.000545374	FOX{I1,J2}.p2	AK203731|Prkcsh|19089|protein kinase C substrate 80K-H
mm9_v1_chr1_+_79772592_79772632	0.000468428	FOX{I1,J2}.p2	NM_001081210|Mrpl44|69163|mitochondrial ribosomal protein L44
mm9_v1_chr12_-_81269174_81269180	0.000455935	FOX{I1,J2}.p2	AK037382|Actn1|109711|actinin, alpha 1
mm9_v1_chr8_+_125927389_125927433	0.000407028	FOX{I1,J2}.p2	
mm9_v1_chr16_-_44016471_44016548	0.000377835	FOX{I1,J2}.p2	BC037472|Gramd1c|207798|GRAM domain containing 1C	AK129016|Gramd1c|207798|GRAM domain containing 1C	AK035257|Gramd1c|207798|GRAM domain containing 1C	NM_153528|Gramd1c|207798|GRAM domain containing 1C
mm9_v1_chr3_+_136333733_136333756	0.000370252	FOX{I1,J2}.p2	J05479|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	NM_008913|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform	BC138612|Ppp3ca|19055|protein phosphatase 3, catalytic subunit, alpha isoform
mm9_v1_chr2_+_103809709_103809717	0.00031538	FOX{I1,J2}.p2	NM_001142336|Lmo2|16909|LIM domain only 2
mm9_v1_chr6_+_122871804_122871930	0.000299562	FOX{I1,J2}.p2	BC049354|Clec4a1|269799|C-type lectin domain family 4, member a1	NM_199311|Clec4a1|269799|C-type lectin domain family 4, member a1	AY397675|Clec4a1|269799|C-type lectin domain family 4, member a1
mm9_v1_chr5_+_130535973_130536156	0.000255644	FOX{I1,J2}.p2	
mm9_v1_chr3_-_89856250_89856452	0.000255098	FOX{I1,J2}.p2	AK030218|Ubap2l|74383|ubiquitin associated protein 2-like	AK031934|Ubap2l|74383|ubiquitin associated protein 2-like	BC023906|Ubap2l|74383|ubiquitin associated protein 2-like	BC029075|Ubap2l|74383|ubiquitin associated protein 2-like	AK088702|Ubap2l|74383|ubiquitin associated protein 2-like	AF276967|Ubap2l|74383|ubiquitin associated protein 2-like	AK048286|Ubap2l|74383|ubiquitin associated protein 2-like	AK079895|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165983|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165985|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165987|Ubap2l|74383|ubiquitin associated protein 2-like	NM_028475|Ubap2l|74383|ubiquitin associated protein 2-like	NM_153489|Ubap2l|74383|ubiquitin associated protein 2-like	AK014274|Ubap2l|74383|ubiquitin associated protein 2-like	AK152135|Ubap2l|74383|ubiquitin associated protein 2-like	AK040551|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165984|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165986|Ubap2l|74383|ubiquitin associated protein 2-like	NM_001165988|Ubap2l|74383|ubiquitin associated protein 2-like
mm9_v1_chr15_-_72926936_72926959	0.000252531	FOX{I1,J2}.p2	AK003962|1110029L17Rik|68722|RIKEN cDNA 1110029L17 gene
mm9_v1_chr4_+_13711928_13711928	0.000232384	FOX{I1,J2}.p2	D32007|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)	NM_009822|Runx1t1|12395|runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
mm9_v1_chr10_-_122513447_122513560	0.000202759	FOX{I1,J2}.p2	AK122425|Mon2|67074|MON2 homolog (yeast)	NM_001163024|Mon2|67074|MON2 homolog (yeast)	NM_001163025|Mon2|67074|MON2 homolog (yeast)	NM_153395|Mon2|67074|MON2 homolog (yeast)
mm9_v1_chr10_+_127740390_127740482	0.000186609	FOX{I1,J2}.p2	AK089001|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	NM_133992|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	BC075686|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK004773|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK048418|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK153343|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	BC079841|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK161547|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK047887|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK157800|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	BC020158|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	BC008521|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)	AK034635|Pan2|103135|PAN2 polyA specific ribonuclease subunit homolog (S. cerevisiae)
mm9_v1_chr2_-_87475901_87475901	0.000132085	FOX{I1,J2}.p2	NM_146836|Olfr1132|258833|olfactory receptor 1132
mm9_v1_chr2_+_91570249_91570297	8.13673e-05	FOX{I1,J2}.p2	NM_001080754|Ambra1|228361|autophagy/beclin 1 regulator 1	NM_172669|Ambra1|228361|autophagy/beclin 1 regulator 1
